RNA–Protein interactions for RNA: ENST00000329082.11

RGMA-201, Transcript of repulsive guidance molecule BMP co-receptor a, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RGMA, Length 11,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGMA-201ENST00000329082 PNMA6EA0A0J9YXQ4 647 aa11.28□□□□□ -0.6
RGMA-201ENST00000329082 PPP2R2AP63151 447 aa11.28□□□□□ -0.6
RGMA-201ENST00000329082 CAV1Q03135 178 aa11.28□□□□□ -0.6
RGMA-201ENST00000329082 P2RX5Q93086 422 aa11.28□□□□□ -0.6
RGMA-201ENST00000329082 PPP6R2O75170 966 aa11.28□□□□□ -0.6
RGMA-201ENST00000329082 FGGP02679 453 aa11.28□□□□□ -0.6
RGMA-201ENST00000329082 RFX1P22670 979 aa11.28□□□□□ -0.6
RGMA-201ENST00000329082 FAM133AQ8N9E0 248 aa11.28□□□□□ -0.6
RGMA-201ENST00000329082 VPS39Q96JC1 886 aa11.28□□□□□ -0.6
RGMA-201ENST00000329082 ZNF594Q96JF6 807 aaPredicted RBP11.28□□□□□ -0.6
RGMA-201ENST00000329082 NDUFB9Q9Y6M9 179 aa11.28□□□□□ -0.6
RGMA-201ENST00000329082 GFPT2O94808 682 aa11.28□□□□□ -0.6
RGMA-201ENST00000329082 GAP43P17677 238 aa11.28□□□□□ -0.6
RGMA-201ENST00000329082 TRIP13Q15645 432 aaPredicted RBP11.28□□□□□ -0.6
RGMA-201ENST00000329082 BLMP54132 1417 aaPredicted RBP11.28□□□□□ -0.6
RGMA-201ENST00000329082 YTHDC2Q9H6S0 1430 aaKnown RBP11.28□□□□□ -0.6
RGMA-201ENST00000329082 ECM2O94769 699 aaPredicted RBP11.28□□□□□ -0.6
RGMA-201ENST00000329082 SLC4A1P02730 911 aa11.28□□□□□ -0.6
RGMA-201ENST00000329082 PSMC2P35998 433 aaKnown RBP11.28□□□□□ -0.6
RGMA-201ENST00000329082 TRAPPC10P48553 1259 aa11.28□□□□□ -0.6
RGMA-201ENST00000329082 MED7O43513 233 aa11.28□□□□□ -0.6
RGMA-201ENST00000329082 TJP3O95049 919 aa11.28□□□□□ -0.6
RGMA-201ENST00000329082 HOXA7P31268 230 aaPredicted RBP11.28□□□□□ -0.6
RGMA-201ENST00000329082 TGFBRAP1Q8WUH2 860 aa11.28□□□□□ -0.6
RGMA-201ENST00000329082 TGS1Q96RS0 853 aaKnown RBP11.28□□□□□ -0.6
RGMA-201ENST00000329082 ATP11BQ9Y2G3 1177 aa11.28□□□□□ -0.6
RGMA-201ENST00000329082 PCDH11XQ9BZA7 1347 aa11.28□□□□□ -0.6
RGMA-201ENST00000329082 PCDH11YQ9BZA8 1340 aa11.28□□□□□ -0.6
RGMA-201ENST00000329082 LLGL1Q15334 1064 aa11.27□□□□□ -0.6
RGMA-201ENST00000329082 CHURC1Q8WUH1 139 aa11.27□□□□□ -0.6
RGMA-201ENST00000329082 RMDN2Q96LZ7 410 aa11.27□□□□□ -0.6
RGMA-201ENST00000329082 EHD2Q9NZN4 543 aa11.27□□□□□ -0.6
RGMA-201ENST00000329082 PDE8AO60658 829 aa11.27□□□□□ -0.6
RGMA-201ENST00000329082 MAP4P27816 1152 aaKnown RBP11.27□□□□□ -0.6
RGMA-201ENST00000329082 ARL4AP40617 200 aa11.27□□□□□ -0.6
RGMA-201ENST00000329082 EP400NLQ6ZTU2 488 aa11.27□□□□□ -0.6
RGMA-201ENST00000329082 GGA1Q9UJY5 639 aa11.27□□□□□ -0.6
RGMA-201ENST00000329082 PARP3Q9Y6F1 533 aa11.27□□□□□ -0.6
RGMA-201ENST00000329082 ZNF233A6NK53 670 aa11.27□□□□□ -0.6
RGMA-201ENST00000329082 ZBED1O96006 694 aa11.27□□□□□ -0.6
RGMA-201ENST00000329082 ZNF280CQ8ND82 737 aa11.27□□□□□ -0.6
RGMA-201ENST00000329082 THOC1Q96FV9 657 aaKnown RBP11.27□□□□□ -0.6
RGMA-201ENST00000329082 ETNK1Q9HBU6 452 aa11.27□□□□□ -0.6
RGMA-201ENST00000329082 BATF3Q9NR55 127 aa11.27□□□□□ -0.6
RGMA-201ENST00000329082 LZTS1Q9Y250 596 aa11.27□□□□□ -0.6
RGMA-201ENST00000329082 PAMP19021 973 aa11.27□□□□□ -0.61
RGMA-201ENST00000329082 GYS2P54840 703 aa11.27□□□□□ -0.61
RGMA-201ENST00000329082 SLC39A14Q15043 492 aa11.27□□□□□ -0.61
RGMA-201ENST00000329082 SMYD4Q8IYR2 804 aaPredicted RBP11.27□□□□□ -0.61
RGMA-201ENST00000329082 CDC26Q8NHZ8 85 aa11.27□□□□□ -0.61
RGMA-201ENST00000329082 THAP11Q96EK4 314 aa11.27□□□□□ -0.61
RGMA-201ENST00000329082 C10orf88Q9H8K7 445 aa11.27□□□□□ -0.61
RGMA-201ENST00000329082 PRPSAP2O60256 369 aa11.27□□□□□ -0.61
RGMA-201ENST00000329082 DDAH1O94760 285 aa11.27□□□□□ -0.61
RGMA-201ENST00000329082 KLC1Q07866 573 aa11.27□□□□□ -0.61
RGMA-201ENST00000329082 SCRN1Q12765 414 aa11.27□□□□□ -0.61
RGMA-201ENST00000329082 ZNF658Q5TYW1 1059 aaPredicted RBP11.27□□□□□ -0.61
RGMA-201ENST00000329082 TBC1D22AQ8WUA7 517 aa11.27□□□□□ -0.61
RGMA-201ENST00000329082 LARP4BQ92615 738 aaKnown RBP11.27□□□□□ -0.61
RGMA-201ENST00000329082 COL17A1Q9UMD9 1497 aaPredicted RBP11.27□□□□□ -0.61
RGMA-201ENST00000329082 TESPA1A2RU30 521 aaPredicted RBP11.27□□□□□ -0.61
RGMA-201ENST00000329082 PRR23D1E9PI22 279 aaPredicted RBP11.27□□□□□ -0.61
RGMA-201ENST00000329082 PRR23D2P0DMB1 279 aaPredicted RBP11.27□□□□□ -0.61
RGMA-201ENST00000329082 ATP2B4P23634 1241 aa11.27□□□□□ -0.61
RGMA-201ENST00000329082 S100A5P33763 92 aa11.27□□□□□ -0.61
RGMA-201ENST00000329082 TBCCQ15814 346 aa11.27□□□□□ -0.61
RGMA-201ENST00000329082 SPOUT1Q5T280 376 aaKnown RBP11.27□□□□□ -0.61
RGMA-201ENST00000329082 SUPT3HO75486 399 aa11.27□□□□□ -0.61
RGMA-201ENST00000329082 ESRRBO95718 433 aa11.27□□□□□ -0.61
RGMA-201ENST00000329082 SMARCA1P28370 1054 aa11.27□□□□□ -0.61
RGMA-201ENST00000329082 HABP4Q5JVS0 413 aaKnown RBP11.27□□□□□ -0.61
RGMA-201ENST00000329082 FAM161BQ96MY7 647 aa11.27□□□□□ -0.61
RGMA-201ENST00000329082 DIABLOQ9NR28 239 aa11.27□□□□□ -0.61
RGMA-201ENST00000329082 CD109Q6YHK3 1445 aa11.27□□□□□ -0.61
RGMA-201ENST00000329082 KRT38O76015 456 aa11.27□□□□□ -0.61
RGMA-201ENST00000329082 AARSP49588 968 aaKnown RBP eCLIP11.27□□□□□ -0.61
RGMA-201ENST00000329082 ARL4CP56559 192 aa11.27□□□□□ -0.61
RGMA-201ENST00000329082 CPSF3Q9UKF6 684 aaKnown RBP11.27□□□□□ -0.61
RGMA-201ENST00000329082 KIAA0586Q9BVV6 1533 aa11.27□□□□□ -0.61
RGMA-201ENST00000329082 A0A0D9SFI3 127 aa11.26□□□□□ -0.61
RGMA-201ENST00000329082 PARP10Q53GL7 1025 aa11.26□□□□□ -0.61
RGMA-201ENST00000329082 DEPDC1Q5TB30 811 aa11.26□□□□□ -0.61
RGMA-201ENST00000329082 CDR2LQ86X02 465 aaPredicted RBP11.26□□□□□ -0.61
RGMA-201ENST00000329082 CATSPER3Q86XQ3 398 aa11.26□□□□□ -0.61
RGMA-201ENST00000329082 CMTR1Q8N1G2 835 aaKnown RBP11.26□□□□□ -0.61
RGMA-201ENST00000329082 PCP11498 1178 aaKnown RBP11.26□□□□□ -0.61
RGMA-201ENST00000329082 BTBD18B2RXH4 712 aa11.26□□□□□ -0.61
RGMA-201ENST00000329082 LPXNO60711 386 aa11.26□□□□□ -0.61
RGMA-201ENST00000329082 EFTUD2Q15029 972 aaKnown RBP eCLIP11.26□□□□□ -0.61
RGMA-201ENST00000329082 CC2D1AQ6P1N0 951 aaPredicted RBP11.26□□□□□ -0.61
RGMA-201ENST00000329082 G2E3Q7L622 706 aa11.26□□□□□ -0.61
RGMA-201ENST00000329082 TEX9Q8N6V9 391 aa11.26□□□□□ -0.61
RGMA-201ENST00000329082 ANKRD36BP1Q96IX9 119 aa11.26□□□□□ -0.61
RGMA-201ENST00000329082 TLR3O15455 904 aaKnown RBP11.26□□□□□ -0.61
RGMA-201ENST00000329082 ABCD1P33897 745 aa11.26□□□□□ -0.61
RGMA-201ENST00000329082 MYH1P12882 1939 aa11.26□□□□□ -0.61
RGMA-201ENST00000329082 MYH2Q9UKX2 1941 aa11.26□□□□□ -0.61
RGMA-201ENST00000329082 MYH4Q9Y623 1939 aa11.26□□□□□ -0.61
RGMA-201ENST00000329082 PNMA1Q8ND90 353 aa11.26□□□□□ -0.61
RGMA-201ENST00000329082 SEPT3Q9UH03 358 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms