RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 BANK1Q8NDB2 785 aa11.46□□□□□ -0.58
VIPAS39-201ENST00000327028 MTRQ99707 1265 aa11.46□□□□□ -0.58
VIPAS39-201ENST00000327028 ZSWIM4Q9H7M6 989 aa11.46□□□□□ -0.58
VIPAS39-201ENST00000327028 MLXIPQ9HAP2 919 aa11.46□□□□□ -0.58
VIPAS39-201ENST00000327028 KIAA1468Q9P260 1216 aa11.46□□□□□ -0.58
VIPAS39-201ENST00000327028 SRRDQ9UH36 339 aa11.46□□□□□ -0.58
VIPAS39-201ENST00000327028 NRBP1Q9UHY1 535 aa11.46□□□□□ -0.58
VIPAS39-201ENST00000327028 NKRFO15226 690 aaKnown RBP eCLIP11.45□□□□□ -0.58
VIPAS39-201ENST00000327028 GH1P01241 217 aa11.45□□□□□ -0.58
VIPAS39-201ENST00000327028 MYL1P05976 194 aa11.45□□□□□ -0.58
VIPAS39-201ENST00000327028 CYP2C19P33261 490 aa11.45□□□□□ -0.58
VIPAS39-201ENST00000327028 PSMC5P62195 406 aa11.45□□□□□ -0.58
VIPAS39-201ENST00000327028 IQSEC1Q6DN90 963 aa11.45□□□□□ -0.58
VIPAS39-201ENST00000327028 SV2BQ7L1I2 683 aa11.45□□□□□ -0.58
VIPAS39-201ENST00000327028 DHX37Q8IY37 1157 aaKnown RBP11.45□□□□□ -0.58
VIPAS39-201ENST00000327028 ZNF296Q8WUU4 475 aaPredicted RBP11.45□□□□□ -0.58
VIPAS39-201ENST00000327028 BEGAINQ9BUH8 593 aa11.45□□□□□ -0.58
VIPAS39-201ENST00000327028 WRAP73Q9P2S5 460 aaPredicted RBP11.45□□□□□ -0.58
VIPAS39-201ENST00000327028 DNM3Q9UQ16 869 aa11.45□□□□□ -0.58
VIPAS39-201ENST00000327028 TELO2Q9Y4R8 837 aa11.45□□□□□ -0.58
VIPAS39-201ENST00000327028 IGSF9BQ9UPX0 1349 aa11.45□□□□□ -0.58
VIPAS39-201ENST00000327028 E9PMD0 336 aa11.45□□□□□ -0.58
VIPAS39-201ENST00000327028 PLA2G4BP0C869 781 aa11.45□□□□□ -0.58
VIPAS39-201ENST00000327028 ZNF865P0CJ78 1059 aaPredicted RBP11.45□□□□□ -0.58
VIPAS39-201ENST00000327028 ARHGAP1Q07960 439 aa11.45□□□□□ -0.58
VIPAS39-201ENST00000327028 DPYDQ12882 1025 aa11.45□□□□□ -0.58
VIPAS39-201ENST00000327028 MCM6Q14566 821 aa11.45□□□□□ -0.58
VIPAS39-201ENST00000327028 ARHGEF6Q15052 776 aa11.45□□□□□ -0.58
VIPAS39-201ENST00000327028 UGCGQ16739 394 aa11.45□□□□□ -0.58
VIPAS39-201ENST00000327028 MFSD14CQ5VZR4 134 aa11.45□□□□□ -0.58
VIPAS39-201ENST00000327028 TRIB2Q92519 343 aa11.45□□□□□ -0.58
VIPAS39-201ENST00000327028 ATP6V0A1Q93050 837 aa11.45□□□□□ -0.58
VIPAS39-201ENST00000327028 EMID1Q96A84 441 aaPredicted RBP11.45□□□□□ -0.58
VIPAS39-201ENST00000327028 NACC1Q96RE7 527 aa11.45□□□□□ -0.58
VIPAS39-201ENST00000327028 LRRC27Q9C0I9 530 aa11.45□□□□□ -0.58
VIPAS39-201ENST00000327028 TUBE1Q9UJT0 475 aa11.45□□□□□ -0.58
VIPAS39-201ENST00000327028 IGKV6D-21A0A0A0MT36 114 aa11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 DKC1O60832 514 aaKnown RBP eCLIP11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 SMC2O95347 1197 aa11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 EYA4O95677 639 aa11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 AMPD3Q01432 767 aa11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 LAMC2Q13753 1193 aa11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 CCDC144BQ3MJ40 725 aa11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 DUSP28Q4G0W2 176 aa11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 TMEM63BQ5T3F8 832 aa11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 NT5DC1Q5TFE4 455 aa11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 LRSAM1Q6UWE0 723 aa11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 CCDC60Q8IWA6 550 aaPredicted RBP11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 C4orf19Q8IY42 314 aa11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 SPATA20Q8TB22 786 aa11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 ERCC4Q92889 916 aaPredicted RBP11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 COPS5Q92905 334 aa11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 GPR20Q99678 358 aa11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 MYH9P35579 1960 aaKnown RBP11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 GSTTP1A0A1W2PQM5 241 aa11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 SMPD1P17405 629 aa11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 SLC12A3P55017 1021 aa11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 PSMC6P62333 389 aa11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 SEPT1Q8WYJ6 367 aa11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 STAMQ92783 540 aa11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 SMARCE1Q969G3 411 aa11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 SPATA33Q96N06 139 aa11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 C7orf25Q9BPX7 421 aa11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 FUCA2Q9BTY2 467 aa11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 WBP1LQ9NX94 342 aa11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 GABBR1Q9UBS5 961 aa11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 ARID2Q68CP9 1835 aa11.44□□□□□ -0.58
VIPAS39-201ENST00000327028 NOP56O00567 594 aaKnown RBP11.43□□□□□ -0.58
VIPAS39-201ENST00000327028 TNFAIP2Q03169 654 aa11.43□□□□□ -0.58
VIPAS39-201ENST00000327028 CUL4BQ13620 913 aa11.43□□□□□ -0.58
VIPAS39-201ENST00000327028 PRAMEF19Q5SWL8 479 aa11.43□□□□□ -0.58
VIPAS39-201ENST00000327028 SWSAP1Q6NVH7 229 aa11.43□□□□□ -0.58
VIPAS39-201ENST00000327028 CNNM4Q6P4Q7 775 aa11.43□□□□□ -0.58
VIPAS39-201ENST00000327028 SASS6Q6UVJ0 657 aa11.43□□□□□ -0.58
VIPAS39-201ENST00000327028 SYT2Q8N9I0 419 aaPredicted RBP11.43□□□□□ -0.58
VIPAS39-201ENST00000327028 TRIM9Q9C026 710 aa11.43□□□□□ -0.58
VIPAS39-201ENST00000327028 BLZF1Q9H2G9 400 aa11.43□□□□□ -0.58
VIPAS39-201ENST00000327028 DBR1Q9UK59 544 aaKnown RBP11.43□□□□□ -0.58
VIPAS39-201ENST00000327028 PCDHA5Q9Y5H7 936 aa11.43□□□□□ -0.58
VIPAS39-201ENST00000327028 BACH1O14867 736 aa11.43□□□□□ -0.58
VIPAS39-201ENST00000327028 LGR5O75473 907 aa11.43□□□□□ -0.58
VIPAS39-201ENST00000327028 CYBAP13498 195 aa11.43□□□□□ -0.58
VIPAS39-201ENST00000327028 CASP1P29466 404 aa11.43□□□□□ -0.58
VIPAS39-201ENST00000327028 TCF7P36402 384 aaPredicted RBP11.43□□□□□ -0.58
VIPAS39-201ENST00000327028 SARSP49591 514 aaKnown RBP11.43□□□□□ -0.58
VIPAS39-201ENST00000327028 PRMT2P55345 433 aa11.43□□□□□ -0.58
VIPAS39-201ENST00000327028 TYRO3Q06418 890 aa11.43□□□□□ -0.58
VIPAS39-201ENST00000327028 DHX8Q14562 1220 aaKnown RBP11.43□□□□□ -0.58
VIPAS39-201ENST00000327028 HSDL1Q3SXM5 330 aa11.43□□□□□ -0.58
VIPAS39-201ENST00000327028 GJC2Q5T442 439 aaPredicted RBP11.43□□□□□ -0.58
VIPAS39-201ENST00000327028 FAM160B1Q5W0V3 765 aa11.43□□□□□ -0.58
VIPAS39-201ENST00000327028 PPTC7Q8NI37 304 aa11.43□□□□□ -0.58
VIPAS39-201ENST00000327028 AFAP1L1Q8TED9 768 aa11.43□□□□□ -0.58
VIPAS39-201ENST00000327028 ZNF302Q9NR11 478 aa11.43□□□□□ -0.58
VIPAS39-201ENST00000327028 MAFBQ9Y5Q3 323 aaPredicted RBP11.43□□□□□ -0.58
VIPAS39-201ENST00000327028 EMSYQ7Z589 1322 aa11.43□□□□□ -0.58
VIPAS39-201ENST00000327028 MYMKA6NI61 221 aa11.42□□□□□ -0.58
VIPAS39-201ENST00000327028 ADCY6O43306 1168 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms