RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 CCDC113Q9H0I3 377 aa14.12□□□□□ -0.15
HMGCS1-201ENST00000325110 NUCKS1Q9H1E3 243 aaKnown RBP14.12□□□□□ -0.15
HMGCS1-201ENST00000325110 RGL1Q9NZL6 768 aa14.12□□□□□ -0.15
HMGCS1-201ENST00000325110 GCNT4Q9P109 453 aa14.12□□□□□ -0.15
HMGCS1-201ENST00000325110 FAM169AQ9Y6X4 670 aa14.12□□□□□ -0.15
HMGCS1-201ENST00000325110 E7EVH7 732 aa14.12□□□□□ -0.15
HMGCS1-201ENST00000325110 RAD51CO43502 376 aa14.12□□□□□ -0.15
HMGCS1-201ENST00000325110 PPP1R12BO60237 982 aaPredicted RBP14.12□□□□□ -0.15
HMGCS1-201ENST00000325110 MYBP10242 640 aa14.12□□□□□ -0.15
HMGCS1-201ENST00000325110 INPP5BP32019 993 aa14.12□□□□□ -0.15
HMGCS1-201ENST00000325110 PROM2Q8N271 834 aa14.12□□□□□ -0.15
HMGCS1-201ENST00000325110 OTUD6BQ8N6M0 293 aa14.12□□□□□ -0.15
HMGCS1-201ENST00000325110 DNAJC19Q96DA6 116 aa14.12□□□□□ -0.15
HMGCS1-201ENST00000325110 IKZF4Q9H2S9 585 aa14.12□□□□□ -0.15
HMGCS1-201ENST00000325110 USP21Q9UK80 565 aa14.12□□□□□ -0.15
HMGCS1-201ENST00000325110 SSU72P8A0A1W2PR75 194 aa14.11□□□□□ -0.15
HMGCS1-201ENST00000325110 ESYT2A0FGR8 921 aa14.11□□□□□ -0.15
HMGCS1-201ENST00000325110 ERLIN2O94905 339 aa14.11□□□□□ -0.15
HMGCS1-201ENST00000325110 EEF2P13639 858 aaKnown RBP14.11□□□□□ -0.15
HMGCS1-201ENST00000325110 CYP11B2P19099 503 aa14.11□□□□□ -0.15
HMGCS1-201ENST00000325110 CTNNA1P35221 906 aaKnown RBP14.11□□□□□ -0.15
HMGCS1-201ENST00000325110 CTTNQ14247 550 aaKnown RBP14.11□□□□□ -0.15
HMGCS1-201ENST00000325110 SEPT2Q15019 361 aa14.11□□□□□ -0.15
HMGCS1-201ENST00000325110 CERKLQ49MI3 558 aaPredicted RBP14.11□□□□□ -0.15
HMGCS1-201ENST00000325110 UHMK1Q8TAS1 419 aaKnown RBP14.11□□□□□ -0.15
HMGCS1-201ENST00000325110 BCAS3Q9H6U6 928 aa14.11□□□□□ -0.15
HMGCS1-201ENST00000325110 DDX60Q8IY21 1712 aaKnown RBP14.11□□□□□ -0.15
HMGCS1-201ENST00000325110 DOCK2Q92608 1830 aa14.11□□□□□ -0.15
HMGCS1-201ENST00000325110 CASZ1Q86V15 1759 aa14.11□□□□□ -0.15
HMGCS1-201ENST00000325110 LRRN2O75325 713 aa14.11□□□□□ -0.15
HMGCS1-201ENST00000325110 FLOT1O75955 427 aa14.11□□□□□ -0.15
HMGCS1-201ENST00000325110 GNA14O95837 355 aa14.11□□□□□ -0.15
HMGCS1-201ENST00000325110 AFPP02771 609 aaKnown RBP14.11□□□□□ -0.15
HMGCS1-201ENST00000325110 KRT13P13646 458 aa14.11□□□□□ -0.15
HMGCS1-201ENST00000325110 MAGEA9P43362 315 aa14.11□□□□□ -0.15
HMGCS1-201ENST00000325110 ARHGAP4P98171 946 aa14.11□□□□□ -0.15
HMGCS1-201ENST00000325110 TEKT1Q969V4 418 aa14.11□□□□□ -0.15
HMGCS1-201ENST00000325110 PURBQ96QR8 312 aaKnown RBP14.11□□□□□ -0.15
HMGCS1-201ENST00000325110 DHX36Q9H2U1 1008 aaKnown RBP14.11□□□□□ -0.15
HMGCS1-201ENST00000325110 ZBTB21Q9ULJ3 1066 aa14.11□□□□□ -0.15
HMGCS1-201ENST00000325110 PLAAQ9Y263 795 aa14.11□□□□□ -0.15
HMGCS1-201ENST00000325110 SRCAPQ6ZRS2 3230 aa14.11□□□□□ -0.15
HMGCS1-201ENST00000325110 CASP4P49662 377 aa14.11□□□□□ -0.15
HMGCS1-201ENST00000325110 MNAT1P51948 309 aa14.11□□□□□ -0.15
HMGCS1-201ENST00000325110 SEC24CP53992 1094 aa14.11□□□□□ -0.15
HMGCS1-201ENST00000325110 ICA1Q05084 483 aa14.11□□□□□ -0.15
HMGCS1-201ENST00000325110 REEP2Q9BRK0 252 aa14.11□□□□□ -0.15
HMGCS1-201ENST00000325110 H2AFZP0C0S5 128 aa14.1□□□□□ -0.15
HMGCS1-201ENST00000325110 HGSNATQ68CP4 663 aa14.1□□□□□ -0.15
HMGCS1-201ENST00000325110 BARGINQ6ZT62 677 aa14.1□□□□□ -0.15
HMGCS1-201ENST00000325110 H2AFVQ71UI9 128 aa14.1□□□□□ -0.15
HMGCS1-201ENST00000325110 RNF10Q8N5U6 811 aaKnown RBP14.1□□□□□ -0.15
HMGCS1-201ENST00000325110 PCDHAC2Q9Y5I4 1007 aa14.1□□□□□ -0.15
HMGCS1-201ENST00000325110 BCORQ6W2J9 1755 aa14.1□□□□□ -0.15
HMGCS1-201ENST00000325110 NR1D1P20393 614 aa14.1□□□□□ -0.15
HMGCS1-201ENST00000325110 SEMA3FQ13275 785 aa14.1□□□□□ -0.15
HMGCS1-201ENST00000325110 IFI16Q16666 785 aaKnown RBP14.1□□□□□ -0.15
HMGCS1-201ENST00000325110 ZFPM1Q8IX07 1006 aa14.1□□□□□ -0.15
HMGCS1-201ENST00000325110 CASKIN2Q8WXE0 1202 aa14.1□□□□□ -0.15
HMGCS1-201ENST00000325110 AMACRQ9UHK6 382 aa14.1□□□□□ -0.15
HMGCS1-201ENST00000325110 SNED1Q8TER0 1413 aa14.1□□□□□ -0.15
HMGCS1-201ENST00000325110 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.1□□□□□ -0.15
HMGCS1-201ENST00000325110 PLCH1Q4KWH8 1693 aa14.1□□□□□ -0.15
HMGCS1-201ENST00000325110 hCG_1984214I3L0E3 225 aa14.1□□□□□ -0.15
HMGCS1-201ENST00000325110 UCHL3P15374 230 aa14.1□□□□□ -0.15
HMGCS1-201ENST00000325110 GCFC2P16383 781 aaKnown RBP14.1□□□□□ -0.15
HMGCS1-201ENST00000325110 KCNA1Q09470 495 aa14.1□□□□□ -0.15
HMGCS1-201ENST00000325110 TTMPQ5BVD1 217 aa14.1□□□□□ -0.15
HMGCS1-201ENST00000325110 RC3H1Q5TC82 1133 aaKnown RBP14.1□□□□□ -0.15
HMGCS1-201ENST00000325110 CCDC174Q6PII3 467 aa14.1□□□□□ -0.15
HMGCS1-201ENST00000325110 GBP6Q6ZN66 633 aa14.1□□□□□ -0.15
HMGCS1-201ENST00000325110 ZNF713Q8N859 430 aaPredicted RBP14.1□□□□□ -0.15
HMGCS1-201ENST00000325110 CYP2W1Q8TAV3 490 aa14.1□□□□□ -0.15
HMGCS1-201ENST00000325110 CAPN7Q9Y6W3 813 aa14.1□□□□□ -0.15
HMGCS1-201ENST00000325110 PPEF1O14829 653 aaPredicted RBP14.09□□□□□ -0.15
HMGCS1-201ENST00000325110 CALUO43852 315 aaPredicted RBP14.09□□□□□ -0.15
HMGCS1-201ENST00000325110 RPL13P26373 211 aaKnown RBP14.09□□□□□ -0.15
HMGCS1-201ENST00000325110 COPB2P35606 906 aa14.09□□□□□ -0.15
HMGCS1-201ENST00000325110 NAB2Q15742 525 aa14.09□□□□□ -0.15
HMGCS1-201ENST00000325110 CATSPER3Q86XQ3 398 aa14.09□□□□□ -0.15
HMGCS1-201ENST00000325110 TRIM59Q8IWR1 403 aa14.09□□□□□ -0.15
HMGCS1-201ENST00000325110 CEP63Q96MT8 703 aa14.09□□□□□ -0.15
HMGCS1-201ENST00000325110 GRID2IPA4D2P6 1211 aa14.09□□□□□ -0.15
HMGCS1-201ENST00000325110 NOL4O94818 638 aa14.09□□□□□ -0.15
HMGCS1-201ENST00000325110 HNRNPH3P31942 346 aaKnown RBP14.09□□□□□ -0.15
HMGCS1-201ENST00000325110 GTF2A1P52655 376 aaPredicted RBP14.09□□□□□ -0.15
HMGCS1-201ENST00000325110 TMEM119Q4V9L6 283 aa14.09□□□□□ -0.15
HMGCS1-201ENST00000325110 ALS2CLQ60I27 953 aa14.09□□□□□ -0.15
HMGCS1-201ENST00000325110 FBXO11Q86XK2 927 aa14.09□□□□□ -0.15
HMGCS1-201ENST00000325110 KDM4FA0A1W2PPD8 638 aa14.08□□□□□ -0.15
HMGCS1-201ENST00000325110 GCOM1H8Y6P7 765 aaPredicted RBP14.08□□□□□ -0.15
HMGCS1-201ENST00000325110 EIF3HO15372 352 aaKnown RBP eCLIP14.08□□□□□ -0.153e-12■□□□□ 8.5
HMGCS1-201ENST00000325110 MYZAPP0CAP1 466 aa14.08□□□□□ -0.15
HMGCS1-201ENST00000325110 TRIM49P0CI25 452 aa14.08□□□□□ -0.15
HMGCS1-201ENST00000325110 TRIM49CP0CI26 452 aa14.08□□□□□ -0.15
HMGCS1-201ENST00000325110 NMT1P30419 496 aaKnown RBP14.08□□□□□ -0.15
HMGCS1-201ENST00000325110 KRT71Q3SY84 523 aa14.08□□□□□ -0.15
HMGCS1-201ENST00000325110 PPP4R3AQ6IN85 833 aa14.08□□□□□ -0.15
HMGCS1-201ENST00000325110 ZNF571Q7Z3V5 609 aaPredicted RBP14.08□□□□□ -0.15
HMGCS1-201ENST00000325110 TADA2BQ86TJ2 420 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms