RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 DCTN3O75935 186 aa22.65■■□□□ 1.22
RNF40-201ENST00000324685 PSAPP07602 524 aa22.65■■□□□ 1.22
RNF40-201ENST00000324685 DEUP1Q05D60 604 aa22.65■■□□□ 1.22
RNF40-201ENST00000324685 USPL1Q5W0Q7 1092 aa22.65■■□□□ 1.22
RNF40-201ENST00000324685 DPP9Q86TI2 863 aa22.65■■□□□ 1.22
RNF40-201ENST00000324685 UNC5CLQ8IV45 518 aa22.65■■□□□ 1.22
RNF40-201ENST00000324685 UPF3AQ9H1J1 476 aaKnown RBP22.65■■□□□ 1.22
RNF40-201ENST00000324685 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.65■■□□□ 1.221e-6■□□□□ 10.2
RNF40-201ENST00000324685 AATKQ6ZMQ8 1374 aa22.65■■□□□ 1.22
RNF40-201ENST00000324685 DYNLL1P63167 89 aaKnown RBP22.65■■□□□ 1.22
RNF40-201ENST00000324685 BAG6P46379 1132 aa22.64■■□□□ 1.22
RNF40-201ENST00000324685 SPICE1Q8N0Z3 855 aa22.64■■□□□ 1.22
RNF40-201ENST00000324685 PDIK1LQ8N165 341 aa22.64■■□□□ 1.22
RNF40-201ENST00000324685 AP5M1Q9H0R1 490 aa22.64■■□□□ 1.22
RNF40-201ENST00000324685 BICRAQ9NZM4 1560 aa22.64■■□□□ 1.22
RNF40-201ENST00000324685 SPDYE2BA6NHP3 402 aa22.64■■□□□ 1.22
RNF40-201ENST00000324685 SPDYE6P0CI01 402 aa22.64■■□□□ 1.22
RNF40-201ENST00000324685 STAT2P52630 851 aa22.64■■□□□ 1.22
RNF40-201ENST00000324685 HP1BP3Q5SSJ5 553 aaPredicted RBP22.64■■□□□ 1.22
RNF40-201ENST00000324685 PYROXD1Q8WU10 500 aa22.64■■□□□ 1.22
RNF40-201ENST00000324685 KIF9Q9HAQ2 790 aa22.64■■□□□ 1.22
RNF40-201ENST00000324685 MEIS1O00470 390 aa22.64■■□□□ 1.21
RNF40-201ENST00000324685 PODXLO00592 558 aa22.64■■□□□ 1.21
RNF40-201ENST00000324685 IL6STP40189 918 aaPredicted RBP22.64■■□□□ 1.21
RNF40-201ENST00000324685 TRIP13Q15645 432 aaPredicted RBP22.64■■□□□ 1.21
RNF40-201ENST00000324685 BANK1Q8NDB2 785 aa22.64■■□□□ 1.21
RNF40-201ENST00000324685 CHAMP1Q96JM3 812 aa22.64■■□□□ 1.21
RNF40-201ENST00000324685 PLEKHF1Q96S99 279 aa22.64■■□□□ 1.21
RNF40-201ENST00000324685 ZBED1O96006 694 aa22.63■■□□□ 1.21
RNF40-201ENST00000324685 BBS9Q3SYG4 887 aa22.63■■□□□ 1.21
RNF40-201ENST00000324685 DHX36Q9H2U1 1008 aaKnown RBP22.63■■□□□ 1.21
RNF40-201ENST00000324685 ABCB6Q9NP58 842 aa22.63■■□□□ 1.21
RNF40-201ENST00000324685 SH3GLB2Q9NR46 395 aa22.63■■□□□ 1.21
RNF40-201ENST00000324685 KRT39Q6A163 491 aa22.63■■□□□ 1.21
RNF40-201ENST00000324685 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.63■■□□□ 1.21
RNF40-201ENST00000324685 SLAIN2Q9P270 581 aa22.63■■□□□ 1.21
RNF40-201ENST00000324685 MFAP3LO75121 409 aa22.63■■□□□ 1.21
RNF40-201ENST00000324685 EEF1B2P24534 225 aaKnown RBP22.63■■□□□ 1.21
RNF40-201ENST00000324685 ST13P4Q8IZP2 240 aaPredicted RBP22.63■■□□□ 1.21
RNF40-201ENST00000324685 PARD3BQ8TEW8 1205 aa22.63■■□□□ 1.21
RNF40-201ENST00000324685 CENPKQ9BS16 269 aa22.63■■□□□ 1.21
RNF40-201ENST00000324685 GCC2Q8IWJ2 1684 aa22.63■■□□□ 1.21
RNF40-201ENST00000324685 CRKLP46109 303 aaKnown RBP22.63■■□□□ 1.21
RNF40-201ENST00000324685 NR5A1Q13285 461 aa22.63■■□□□ 1.21
RNF40-201ENST00000324685 ARL13BQ3SXY8 428 aa22.63■■□□□ 1.21
RNF40-201ENST00000324685 ARMCX2Q7L311 632 aa22.63■■□□□ 1.21
RNF40-201ENST00000324685 MAML1Q92585 1016 aa22.63■■□□□ 1.21
RNF40-201ENST00000324685 ANLNQ9NQW6 1124 aa22.63■■□□□ 1.21
RNF40-201ENST00000324685 TRIM67Q6ZTA4 783 aa22.63■■□□□ 1.21
RNF40-201ENST00000324685 TTC25Q96NG3 672 aa22.63■■□□□ 1.21
RNF40-201ENST00000324685 AP1M1Q9BXS5 423 aa22.63■■□□□ 1.21
RNF40-201ENST00000324685 NXF1Q9UBU9 619 aaKnown RBP22.63■■□□□ 1.21
RNF40-201ENST00000324685 TAC1P20366 129 aa22.62■■□□□ 1.21
RNF40-201ENST00000324685 EEF1DP29692 281 aaKnown RBP22.62■■□□□ 1.21
RNF40-201ENST00000324685 NLGN1Q8N2Q7 840 aa22.62■■□□□ 1.21
RNF40-201ENST00000324685 LCORLQ8N3X6 602 aa22.62■■□□□ 1.21
RNF40-201ENST00000324685 PTPN21Q16825 1174 aa22.62■■□□□ 1.21
RNF40-201ENST00000324685 SUDS3Q9H7L9 328 aaPredicted RBP22.62■■□□□ 1.21
RNF40-201ENST00000324685 GINM1Q9NU53 330 aa22.62■■□□□ 1.21
RNF40-201ENST00000324685 CLASP1Q7Z460 1538 aa22.62■■□□□ 1.21
RNF40-201ENST00000324685 CA4P22748 312 aa22.62■■□□□ 1.21
RNF40-201ENST00000324685 SLC16A2P36021 539 aa22.62■■□□□ 1.21
RNF40-201ENST00000324685 CRLF3Q8IUI8 442 aa22.62■■□□□ 1.21
RNF40-201ENST00000324685 PYGBP11216 843 aa22.62■■□□□ 1.21
RNF40-201ENST00000324685 PPARGP37231 505 aaPredicted RBP22.62■■□□□ 1.21
RNF40-201ENST00000324685 SLFN12LQ6IEE8 588 aa22.61■■□□□ 1.21
RNF40-201ENST00000324685 RPAP1Q9BWH6 1393 aaPredicted RBP22.61■■□□□ 1.21
RNF40-201ENST00000324685 ZBTB33Q86T24 672 aa22.61■■□□□ 1.21
RNF40-201ENST00000324685 SUCLA2Q9P2R7 463 aaPredicted RBP22.61■■□□□ 1.21
RNF40-201ENST00000324685 LRFN2Q9ULH4 789 aa22.61■■□□□ 1.21
RNF40-201ENST00000324685 TMEM2Q9UHN6 1383 aa22.61■■□□□ 1.21
RNF40-201ENST00000324685 TJP3O95049 919 aa22.61■■□□□ 1.21
RNF40-201ENST00000324685 ZSCAN20P17040 1043 aaPredicted RBP22.61■■□□□ 1.21
RNF40-201ENST00000324685 DDIT3P35638 169 aa22.61■■□□□ 1.21
RNF40-201ENST00000324685 LIFRP42702 1097 aa22.61■■□□□ 1.21
RNF40-201ENST00000324685 HIBCHQ6NVY1 386 aaPredicted RBP22.61■■□□□ 1.21
RNF40-201ENST00000324685 FAM96AQ9H5X1 160 aa22.61■■□□□ 1.21
RNF40-201ENST00000324685 SERPINB13Q9UIV8 391 aa22.61■■□□□ 1.21
RNF40-201ENST00000324685 KRT31Q15323 416 aa22.61■■□□□ 1.21
RNF40-201ENST00000324685 COA7Q96BR5 231 aa22.61■■□□□ 1.21
RNF40-201ENST00000324685 HEXIM2Q96MH2 286 aaKnown RBP22.61■■□□□ 1.21
RNF40-201ENST00000324685 MAGED2Q9UNF1 606 aaPredicted RBP22.61■■□□□ 1.21
RNF40-201ENST00000324685 PCDHB6Q9Y5E3 794 aa22.61■■□□□ 1.21
RNF40-201ENST00000324685 CFLARO15519 480 aa22.61■■□□□ 1.21
RNF40-201ENST00000324685 CC2D2BQ6DHV5 1058 aa22.61■■□□□ 1.21
RNF40-201ENST00000324685 C7orf31Q8N865 590 aa22.61■■□□□ 1.21
RNF40-201ENST00000324685 SPDYE1Q8NFV5 336 aaPredicted RBP22.61■■□□□ 1.21
RNF40-201ENST00000324685 FTOQ9C0B1 505 aaKnown RBP eCLIP22.61■■□□□ 1.21
RNF40-201ENST00000324685 LOC102724428A0A0B4J2F2 783 aa22.6■■□□□ 1.21
RNF40-201ENST00000324685 WDR64B1ANS9 1081 aa22.6■■□□□ 1.21
RNF40-201ENST00000324685 ANXA13P27216 316 aa22.6■■□□□ 1.21
RNF40-201ENST00000324685 SIK1P57059 783 aa22.6■■□□□ 1.21
RNF40-201ENST00000324685 TAF1BQ53T94 588 aaPredicted RBP22.6■■□□□ 1.21
RNF40-201ENST00000324685 PIP4K2CQ8TBX8 421 aa22.6■■□□□ 1.21
RNF40-201ENST00000324685 KIFC3Q9BVG8 833 aa22.6■■□□□ 1.21
RNF40-201ENST00000324685 KIF21AQ7Z4S6 1674 aa22.6■■□□□ 1.21
RNF40-201ENST00000324685 KRT37O76014 449 aa22.6■■□□□ 1.21
RNF40-201ENST00000324685 SOX5P35711 763 aa22.6■■□□□ 1.21
RNF40-201ENST00000324685 SLC7A5Q01650 507 aa22.6■■□□□ 1.21
RNF40-201ENST00000324685 SPARCL1Q14515 664 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms