RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 CDHR1Q96JP9 859 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 PCDHA6Q9UN73 950 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 PCDHA8Q9Y5H6 950 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 GOLGA8SH3BPF8 625 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 SERPINB6P35237 376 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 NEK9Q8TD19 979 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 CFAP36Q96G28 342 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 TRPC5Q9UL62 973 aaPredicted RBP11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 KIF28PB7ZC32 967 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 PLS3P13797 630 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 CNGA1P29973 690 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 PRCPP42785 496 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 MTERF2Q49AM1 385 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 CLEC4GQ6UXB4 293 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 SNX25Q9H3E2 840 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 PLAAQ9Y263 795 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 ZDHHC9Q9Y397 364 aa11.79□□□□□ -0.52
SNRNP200-201ENST00000323853 PFDN6O15212 129 aa11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 FAM133BQ5BKY9 247 aaKnown RBP11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 PROM2Q8N271 834 aa11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 GDAP1Q8TB36 358 aa11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 CALR3Q96L12 384 aaKnown RBP11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 NFU1Q9UMS0 254 aa11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 SART1O43290 800 aaKnown RBP11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 NPR1P16066 1061 aa11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 CCDC144BQ3MJ40 725 aa11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 RAPH1Q70E73 1250 aa11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 ENAHQ8N8S7 591 aaPredicted RBP11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 ADD3Q9UEY8 706 aaKnown RBP11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 GSTA1P08263 222 aa11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 GSTA2P09210 222 aa11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 CASP1P29466 404 aa11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 SLCO1A2P46721 670 aa11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 FAM193BQ96PV7 902 aaPredicted RBP11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 ACTR5Q9H9F9 607 aaPredicted RBP11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 GOLGA8QA0A0J9YX86 632 aa11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 GOLGA8IPA6NC78 632 aa11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 GOLGA8OA6NCC3 632 aa11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 GOLGA8JA6NMD2 632 aa11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 GOLGA8NF8WBI6 632 aa11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 ZBTB5O15062 677 aa11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 NMT2O60551 498 aa11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 ACTN1P12814 892 aa11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 PDE1BQ01064 536 aa11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 ALX1Q15699 326 aa11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 CYP4F22Q6NT55 531 aa11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 RHOT2Q8IXI1 618 aa11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 FMO2Q99518 471 aa11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 SLC38A10Q9HBR0 1119 aa11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 COL15A1P39059 1388 aa11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 LRRC53A6NM62 1247 aa11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 COASYQ13057 564 aa11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 C6orf118Q5T5N4 469 aa11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 EMBQ6PCB8 327 aa11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 SULF1Q8IWU6 871 aa11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 MYO3AQ8NEV4 1616 aa11.78□□□□□ -0.52
SNRNP200-201ENST00000323853 RASGRF2O14827 1237 aa11.77□□□□□ -0.52
SNRNP200-201ENST00000323853 CTNND1O60716 968 aaKnown RBP11.77□□□□□ -0.52
SNRNP200-201ENST00000323853 SRGAP2O75044 1071 aa11.77□□□□□ -0.52
SNRNP200-201ENST00000323853 ABL1P00519 1130 aa11.77□□□□□ -0.52
SNRNP200-201ENST00000323853 ADCY2Q08462 1091 aa11.77□□□□□ -0.52
SNRNP200-201ENST00000323853 ORC2Q13416 577 aaPredicted RBP11.77□□□□□ -0.52
SNRNP200-201ENST00000323853 HVCN1Q96D96 273 aa11.77□□□□□ -0.52
SNRNP200-201ENST00000323853 TMEM47Q9BQJ4 181 aa11.77□□□□□ -0.52
SNRNP200-201ENST00000323853 USP42Q9H9J4 1324 aaKnown RBP11.77□□□□□ -0.52
SNRNP200-201ENST00000323853 GFPT1Q06210 699 aaPredicted RBP11.77□□□□□ -0.52
SNRNP200-201ENST00000323853 ZKSCAN8Q15776 578 aaPredicted RBP11.77□□□□□ -0.52
SNRNP200-201ENST00000323853 MMEL1Q495T6 779 aa11.77□□□□□ -0.52
SNRNP200-201ENST00000323853 TMEM179Q6ZVK1 233 aa11.77□□□□□ -0.52
SNRNP200-201ENST00000323853 MICAL1Q8TDZ2 1067 aa11.77□□□□□ -0.52
SNRNP200-201ENST00000323853 LRGUKQ96M69 825 aa11.77□□□□□ -0.52
SNRNP200-201ENST00000323853 A0A087WUV0 522 aaPredicted RBP11.77□□□□□ -0.53
SNRNP200-201ENST00000323853 PRELPP51888 382 aa11.77□□□□□ -0.53
SNRNP200-201ENST00000323853 RWDD2BP57060 319 aa11.77□□□□□ -0.53
SNRNP200-201ENST00000323853 ARHGAP4P98171 946 aa11.77□□□□□ -0.53
SNRNP200-201ENST00000323853 SATB1Q01826 763 aa11.77□□□□□ -0.53
SNRNP200-201ENST00000323853 DBN1Q16643 649 aa11.77□□□□□ -0.53
SNRNP200-201ENST00000323853 TXLNGQ9NUQ3 528 aa11.77□□□□□ -0.53
SNRNP200-201ENST00000323853 SPATA31A3Q5VYP0 1347 aa11.77□□□□□ -0.53
SNRNP200-201ENST00000323853 TFAMQ00059 246 aaKnown RBP11.77□□□□□ -0.53
SNRNP200-201ENST00000323853 RCN2Q14257 317 aa11.77□□□□□ -0.53
SNRNP200-201ENST00000323853 SURF1Q15526 300 aa11.77□□□□□ -0.53
SNRNP200-201ENST00000323853 RPS6KC1Q96S38 1066 aa11.77□□□□□ -0.53
SNRNP200-201ENST00000323853 MTA3Q9BTC8 594 aa11.77□□□□□ -0.53
SNRNP200-201ENST00000323853 USP27XA6NNY8 438 aa11.77□□□□□ -0.53
SNRNP200-201ENST00000323853 VGLL3A8MV65 326 aa11.77□□□□□ -0.53
SNRNP200-201ENST00000323853 BASP1P80723 227 aaKnown RBP11.77□□□□□ -0.53
SNRNP200-201ENST00000323853 QTRT2Q9H974 415 aaKnown RBP11.77□□□□□ -0.53
SNRNP200-201ENST00000323853 TBK1Q9UHD2 729 aa11.77□□□□□ -0.53
SNRNP200-201ENST00000323853 DNAJC12Q9UKB3 198 aa11.77□□□□□ -0.53
SNRNP200-201ENST00000323853 MINPP1Q9UNW1 487 aa11.77□□□□□ -0.53
SNRNP200-201ENST00000323853 PLEKHG2Q9H7P9 1386 aa11.77□□□□□ -0.53
SNRNP200-201ENST00000323853 INO80B-WBP1J3KQ70 363 aa11.77□□□□□ -0.53
SNRNP200-201ENST00000323853 LPXNO60711 386 aa11.77□□□□□ -0.53
SNRNP200-201ENST00000323853 JAK3P52333 1124 aa11.77□□□□□ -0.53
SNRNP200-201ENST00000323853 ASPHQ12797 758 aa11.77□□□□□ -0.53
SNRNP200-201ENST00000323853 CCDC93Q567U6 631 aa11.77□□□□□ -0.53
SNRNP200-201ENST00000323853 ALKBH5Q6P6C2 394 aaKnown RBP11.77□□□□□ -0.53
SNRNP200-201ENST00000323853 ARHGAP27Q6ZUM4 889 aa11.77□□□□□ -0.53
SNRNP200-201ENST00000323853 FOXP4Q8IVH2 680 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms