RNA–Protein interactions for RNA: ENST00000323022.9

CACNA1F-201, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 1 (best) BASIC

Gene CACNA1F, Length 6,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-201ENST00000323022 IER5Q5VY09 327 aa13.33□□□□□ -0.27
CACNA1F-201ENST00000323022 LRRC31Q6UY01 552 aa13.33□□□□□ -0.27
CACNA1F-201ENST00000323022 ERO1AQ96HE7 468 aa13.33□□□□□ -0.27
CACNA1F-201ENST00000323022 DEFB129Q9H1M3 183 aa13.33□□□□□ -0.27
CACNA1F-201ENST00000323022 SPATA31A1Q5TZJ5 1347 aa13.33□□□□□ -0.27
CACNA1F-201ENST00000323022 NVLO15381 856 aaKnown RBP13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 COG2Q14746 738 aa13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 TMCO4Q5TGY1 634 aa13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 IFNLR1Q8IU57 520 aaPredicted RBP13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 TMCO5AQ8N6Q1 288 aa13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 LINC00116Q8NCU8 138 aa13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 TTLL11Q8NHH1 800 aa13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 PIGOQ8TEQ8 1089 aa13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 PSPC1Q8WXF1 523 aaKnown RBP13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 PBXIP1Q96AQ6 731 aa13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 GABBR1Q9UBS5 961 aa13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 MSRAQ9UJ68 235 aa13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 MAP3K4Q9Y6R4 1608 aa13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 RGL2O15211 777 aa13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 TRAPPC3O43617 180 aa13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 TUBBP07437 444 aa13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 ADORA2BP29275 332 aa13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 SPATA2LQ8IUW3 424 aaPredicted RBP13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 PGBD4Q96DM1 585 aa13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 RBSNQ9H1K0 784 aa13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 POLR3EQ9NVU0 708 aa13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 ZNF70Q9UC06 446 aaPredicted RBP13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 PCDHA6Q9UN73 950 aa13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 PCDHA8Q9Y5H6 950 aa13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 AATKQ6ZMQ8 1374 aa13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 COBLO75128 1261 aa13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 CYP19A1P11511 503 aaPredicted RBP13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 ARHGAP15Q53QZ3 475 aa13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 HDXQ7Z353 690 aa13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 CCDC170Q8IYT3 715 aa13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 GBP7Q8N8V2 638 aaPredicted RBP13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 POLR2FP61218 127 aaKnown RBP13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 C8orf34Q49A92 452 aa13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 PRR5LQ6MZQ0 368 aa13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 CYFIP1Q7L576 1253 aa13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 ARHGEF2Q92974 986 aaKnown RBP13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 LSM7Q9UK45 103 aaKnown RBP13.33□□□□□ -0.28
CACNA1F-201ENST00000323022 FAM47DPA6NHR8 397 aa13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 PCP11498 1178 aaKnown RBP13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 DEFB115Q30KQ5 88 aa13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 CYP26C1Q6V0L0 522 aa13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 RASSF4Q9H2L5 321 aa13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 METTL14Q9HCE5 456 aaKnown RBP13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 SH3BP1Q9Y3L3 701 aa13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 PRR36Q9H6K5 1346 aa13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 HMGB1P1B2RPK0 211 aaPredicted RBP13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 AGRPO00253 132 aa13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 LRRN2O75325 713 aa13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 ZNF202O95125 648 aa13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 MAGEA1P43355 309 aa13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 PTGDRQ13258 359 aa13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 KIAA1755Q5JYT7 1200 aa13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 SYCE1Q8N0S2 351 aa13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 SYNMO15061 1565 aa13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 SPTLC1O15269 473 aa13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 NOSTRINQ8IVI9 506 aa13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 IFT43Q96FT9 208 aa13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 RMDN2Q96LZ7 410 aa13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 USP44Q9H0E7 712 aa13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 RALAP11233 206 aa13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 SH2D4BQ5SQS7 431 aa13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 JADE1Q6IE81 842 aa13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 NUP58Q9BVL2 599 aa13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 ADCY10Q96PN6 1610 aa13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 CPT1AP50416 773 aa13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 CCDC84Q86UT8 332 aaPredicted RBP13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 SLC44A5Q8NCS7 719 aa13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 CPVLQ9H3G5 476 aa13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 AFF4Q9UHB7 1163 aaKnown RBP13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 FIS1Q9Y3D6 152 aa13.32□□□□□ -0.28
CACNA1F-201ENST00000323022 GH1P01241 217 aa13.31□□□□□ -0.28
CACNA1F-201ENST00000323022 SP100P23497 879 aaPredicted RBP13.31□□□□□ -0.28
CACNA1F-201ENST00000323022 ADCY8P40145 1251 aa13.31□□□□□ -0.28
CACNA1F-201ENST00000323022 NSUN2Q08J23 767 aaKnown RBP eCLIP13.31□□□□□ -0.28
CACNA1F-201ENST00000323022 MXD4Q14582 209 aaPredicted RBP13.31□□□□□ -0.28
CACNA1F-201ENST00000323022 SURF1Q15526 300 aa13.31□□□□□ -0.28
CACNA1F-201ENST00000323022 MGAT5BQ3V5L5 792 aa13.31□□□□□ -0.28
CACNA1F-201ENST00000323022 ANGPTL8Q6UXH0 198 aa13.31□□□□□ -0.28
CACNA1F-201ENST00000323022 RAB44Q7Z6P3 723 aaPredicted RBP13.31□□□□□ -0.28
CACNA1F-201ENST00000323022 ARHGAP24Q8N264 748 aa13.31□□□□□ -0.28
CACNA1F-201ENST00000323022 KCTD6Q8NC69 237 aa13.31□□□□□ -0.28
CACNA1F-201ENST00000323022 TBC1D16Q8TBP0 767 aa13.31□□□□□ -0.28
CACNA1F-201ENST00000323022 EXT2Q93063 718 aa13.31□□□□□ -0.28
CACNA1F-201ENST00000323022 ZKSCAN4Q969J2 545 aaPredicted RBP13.31□□□□□ -0.28
CACNA1F-201ENST00000323022 DACT3Q96B18 629 aaPredicted RBP13.31□□□□□ -0.28
CACNA1F-201ENST00000323022 CALN1Q9BXU9 219 aa13.31□□□□□ -0.28
CACNA1F-201ENST00000323022 TMEM39BQ9GZU3 492 aa13.31□□□□□ -0.28
CACNA1F-201ENST00000323022 ADD2P35612 726 aa13.31□□□□□ -0.28
CACNA1F-201ENST00000323022 ZNF667Q5HYK9 610 aa13.31□□□□□ -0.28
CACNA1F-201ENST00000323022 NAPGQ99747 312 aaPredicted RBP13.31□□□□□ -0.28
CACNA1F-201ENST00000323022 SGK1O00141 431 aa13.31□□□□□ -0.28
CACNA1F-201ENST00000323022 DDHD2O94830 711 aa13.31□□□□□ -0.28
CACNA1F-201ENST00000323022 PCK1P35558 622 aa13.31□□□□□ -0.28
CACNA1F-201ENST00000323022 GPC3P51654 580 aa13.31□□□□□ -0.28
CACNA1F-201ENST00000323022 CDR2Q01850 454 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms