RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 Q4G0T1 1027 aa16.6■□□□□ 0.25
TUBA3D-201ENST00000321253 OTOP2Q7RTS6 562 aa16.6■□□□□ 0.25
TUBA3D-201ENST00000321253 NEK8Q86SG6 692 aa16.6■□□□□ 0.25
TUBA3D-201ENST00000321253 SMAP1Q8IYB5 467 aaPredicted RBP16.6■□□□□ 0.25
TUBA3D-201ENST00000321253 OXER1Q8TDS5 423 aa16.6■□□□□ 0.25
TUBA3D-201ENST00000321253 FTOQ9C0B1 505 aaKnown RBP eCLIP16.6■□□□□ 0.25
TUBA3D-201ENST00000321253 DDX25Q9UHL0 483 aaKnown RBP16.6■□□□□ 0.25
TUBA3D-201ENST00000321253 KAT6AQ92794 2004 aa16.59■□□□□ 0.25
TUBA3D-201ENST00000321253 CYP3A7-CYP3A51PA0A087WV96 503 aa16.59■□□□□ 0.25
TUBA3D-201ENST00000321253 MMP1P03956 469 aa16.59■□□□□ 0.25
TUBA3D-201ENST00000321253 ACTN1P12814 892 aa16.59■□□□□ 0.25
TUBA3D-201ENST00000321253 CYP3A7P24462 503 aa16.59■□□□□ 0.25
TUBA3D-201ENST00000321253 HMGN5P82970 282 aaKnown RBP16.59■□□□□ 0.25
TUBA3D-201ENST00000321253 GRIK4Q16099 956 aa16.59■□□□□ 0.25
TUBA3D-201ENST00000321253 TRIM71Q2Q1W2 868 aaKnown RBP16.59■□□□□ 0.25
TUBA3D-201ENST00000321253 LRCH2Q5VUJ6 765 aa16.59■□□□□ 0.25
TUBA3D-201ENST00000321253 KRT40Q6A162 431 aa16.59■□□□□ 0.25
TUBA3D-201ENST00000321253 GPR153Q6NV75 609 aa16.59■□□□□ 0.25
TUBA3D-201ENST00000321253 ABHD15Q6UXT9 468 aa16.59■□□□□ 0.25
TUBA3D-201ENST00000321253 FAM184AQ8NB25 1140 aa16.59■□□□□ 0.25
TUBA3D-201ENST00000321253 HERVK_113Q902F9 699 aa16.59■□□□□ 0.25
TUBA3D-201ENST00000321253 WNT8BQ93098 351 aa16.59■□□□□ 0.25
TUBA3D-201ENST00000321253 RIT2Q99578 217 aa16.59■□□□□ 0.25
TUBA3D-201ENST00000321253 NAP1L4Q99733 375 aaKnown RBP16.59■□□□□ 0.25
TUBA3D-201ENST00000321253 TEKT3Q9BXF9 490 aa16.59■□□□□ 0.25
TUBA3D-201ENST00000321253 ZNF302Q9NR11 478 aa16.59■□□□□ 0.25
TUBA3D-201ENST00000321253 SAMM50Q9Y512 469 aa16.59■□□□□ 0.25
TUBA3D-201ENST00000321253 IGKV6D-21A0A0A0MT36 114 aa16.58■□□□□ 0.24
TUBA3D-201ENST00000321253 WDR64B1ANS9 1081 aa16.58■□□□□ 0.24
TUBA3D-201ENST00000321253 PSAPP07602 524 aa16.58■□□□□ 0.24
TUBA3D-201ENST00000321253 GCFC2P16383 781 aaKnown RBP16.58■□□□□ 0.24
TUBA3D-201ENST00000321253 SMAD3P84022 425 aaKnown RBP16.58■□□□□ 0.24
TUBA3D-201ENST00000321253 NR5A1Q13285 461 aa16.58■□□□□ 0.24
TUBA3D-201ENST00000321253 SAFBQ15424 915 aaKnown RBP eCLIP16.58■□□□□ 0.24
TUBA3D-201ENST00000321253 ZNF618Q5T7W0 954 aa16.58■□□□□ 0.24
TUBA3D-201ENST00000321253 SWSAP1Q6NVH7 229 aa16.58■□□□□ 0.24
TUBA3D-201ENST00000321253 PDXDC2PQ6P474 469 aa16.58■□□□□ 0.24
TUBA3D-201ENST00000321253 SLC5A5Q92911 643 aa16.58■□□□□ 0.24
TUBA3D-201ENST00000321253 TUBE1Q9UJT0 475 aa16.58■□□□□ 0.24
TUBA3D-201ENST00000321253 PCDHA10Q9Y5I2 948 aa16.58■□□□□ 0.24
TUBA3D-201ENST00000321253 SCN5AQ14524 2016 aa16.58■□□□□ 0.24
TUBA3D-201ENST00000321253 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.57■□□□□ 0.24
TUBA3D-201ENST00000321253 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.57■□□□□ 0.24
TUBA3D-201ENST00000321253 RRN3P2A6NIE6 340 aa16.57■□□□□ 0.24
TUBA3D-201ENST00000321253 ZBBXA8MT70 800 aa16.57■□□□□ 0.24
TUBA3D-201ENST00000321253 CAND2O75155 1236 aa16.57■□□□□ 0.24
TUBA3D-201ENST00000321253 IGBP1P78318 339 aa16.57■□□□□ 0.24
TUBA3D-201ENST00000321253 PLCB4Q15147 1175 aa16.57■□□□□ 0.24
TUBA3D-201ENST00000321253 RASIP1Q5U651 963 aa16.57■□□□□ 0.24
TUBA3D-201ENST00000321253 TAF2Q6P1X5 1199 aa16.57■□□□□ 0.24
TUBA3D-201ENST00000321253 CCDC60Q8IWA6 550 aaPredicted RBP16.57■□□□□ 0.24
TUBA3D-201ENST00000321253 CKAP2LQ8IYA6 745 aa16.57■□□□□ 0.24
TUBA3D-201ENST00000321253 DIS3L2Q8IYB7 885 aaKnown RBP16.57■□□□□ 0.24
TUBA3D-201ENST00000321253 C8orf76Q96K31 380 aa16.57■□□□□ 0.24
TUBA3D-201ENST00000321253 MBOAT7Q96N66 472 aa16.57■□□□□ 0.24
TUBA3D-201ENST00000321253 POTEB3A0JP26 581 aa16.56■□□□□ 0.24
TUBA3D-201ENST00000321253 RSPH10B2B2RC85 870 aa16.56■□□□□ 0.24
TUBA3D-201ENST00000321253 CHMP2AO43633 222 aa16.56■□□□□ 0.24
TUBA3D-201ENST00000321253 CCNT1O60563 726 aaKnown RBP16.56■□□□□ 0.24
TUBA3D-201ENST00000321253 RSPH10BP0C881 870 aa16.56■□□□□ 0.24
TUBA3D-201ENST00000321253 INSRRP14616 1297 aa16.56■□□□□ 0.24
TUBA3D-201ENST00000321253 MCM2P49736 904 aa16.56■□□□□ 0.24
TUBA3D-201ENST00000321253 JAK3P52333 1124 aa16.56■□□□□ 0.24
TUBA3D-201ENST00000321253 ADAM17P78536 824 aa16.56■□□□□ 0.24
TUBA3D-201ENST00000321253 PPP4R3AQ6IN85 833 aa16.56■□□□□ 0.24
TUBA3D-201ENST00000321253 POTEBQ6S5H4 581 aa16.56■□□□□ 0.24
TUBA3D-201ENST00000321253 RSPH3Q86UC2 560 aa16.56■□□□□ 0.24
TUBA3D-201ENST00000321253 BACH2Q9BYV9 841 aa16.56■□□□□ 0.24
TUBA3D-201ENST00000321253 CXXC1Q9P0U4 656 aaPredicted RBP16.56■□□□□ 0.24
TUBA3D-201ENST00000321253 BTBD18B2RXH4 712 aa16.55■□□□□ 0.24
TUBA3D-201ENST00000321253 SLC37A4O43826 429 aa16.55■□□□□ 0.24
TUBA3D-201ENST00000321253 MARCH6O60337 910 aa16.55■□□□□ 0.24
TUBA3D-201ENST00000321253 SFNP31947 248 aa16.55■□□□□ 0.24
TUBA3D-201ENST00000321253 GUCY1B3Q02153 619 aa16.55■□□□□ 0.24
TUBA3D-201ENST00000321253 ATP8B4Q8TF62 1192 aa16.55■□□□□ 0.24
TUBA3D-201ENST00000321253 TNFRSF25Q93038 417 aa16.55■□□□□ 0.24
TUBA3D-201ENST00000321253 GJA10Q969M2 543 aa16.55■□□□□ 0.24
TUBA3D-201ENST00000321253 VWCEQ96DN2 955 aa16.55■□□□□ 0.24
TUBA3D-201ENST00000321253 DISC1Q9NRI5 854 aa16.55■□□□□ 0.24
TUBA3D-201ENST00000321253 GABBR1Q9UBS5 961 aa16.55■□□□□ 0.24
TUBA3D-201ENST00000321253 SLC4A7Q9Y6M7 1214 aa16.55■□□□□ 0.24
TUBA3D-201ENST00000321253 SZT2Q5T011 3432 aa16.55■□□□□ 0.24
TUBA3D-201ENST00000321253 MBLAC1A4D2B0 266 aaPredicted RBP16.55■□□□□ 0.24
TUBA3D-201ENST00000321253 HBP1O60381 514 aa16.55■□□□□ 0.24
TUBA3D-201ENST00000321253 NBNO60934 754 aa16.55■□□□□ 0.24
TUBA3D-201ENST00000321253 PSMD10O75832 226 aa16.55■□□□□ 0.24
TUBA3D-201ENST00000321253 CTSHP09668 335 aa16.55■□□□□ 0.24
TUBA3D-201ENST00000321253 EARS2Q5JPH6 523 aaKnown RBP16.55■□□□□ 0.24
TUBA3D-201ENST00000321253 MARCH8Q5T0T0 291 aa16.55■□□□□ 0.24
TUBA3D-201ENST00000321253 ETNPPLQ8TBG4 499 aa16.55■□□□□ 0.24
TUBA3D-201ENST00000321253 UNC45AQ9H3U1 944 aa16.55■□□□□ 0.24
TUBA3D-201ENST00000321253 KIF3AQ9Y496 699 aa16.55■□□□□ 0.24
TUBA3D-201ENST00000321253 MAFBQ9Y5Q3 323 aaPredicted RBP16.55■□□□□ 0.24
TUBA3D-201ENST00000321253 FAM205CA6NFA0 338 aa16.54■□□□□ 0.24
TUBA3D-201ENST00000321253 BAIAP3O94812 1187 aa16.54■□□□□ 0.24
TUBA3D-201ENST00000321253 CXCL10P02778 98 aa16.54■□□□□ 0.24
TUBA3D-201ENST00000321253 RPLP2P05387 115 aaKnown RBP16.54■□□□□ 0.24
TUBA3D-201ENST00000321253 ZNF697Q5TEC3 545 aa16.54■□□□□ 0.24
TUBA3D-201ENST00000321253 CNKSR3Q6P9H4 555 aa16.54■□□□□ 0.24
TUBA3D-201ENST00000321253 TRAF7Q6Q0C0 670 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms