RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 ZNF746Q6NUN9 644 aaPredicted RBP19.8■□□□□ 0.76
RAB39A-201ENST00000320578 PPP4R3CPQ6ZMV5 832 aa19.8■□□□□ 0.76
RAB39A-201ENST00000320578 REEP2Q9BRK0 252 aa19.8■□□□□ 0.76
RAB39A-201ENST00000320578 TMX1Q9H3N1 280 aa19.8■□□□□ 0.76
RAB39A-201ENST00000320578 OLFML3Q9NRN5 406 aa19.8■□□□□ 0.76
RAB39A-201ENST00000320578 TCEAL9Q9UHQ7 104 aa19.8■□□□□ 0.76
RAB39A-201ENST00000320578 COBLO75128 1261 aa19.79■□□□□ 0.76
RAB39A-201ENST00000320578 GUCY2CP25092 1073 aa19.79■□□□□ 0.76
RAB39A-201ENST00000320578 GNPTABQ3T906 1256 aa19.79■□□□□ 0.76
RAB39A-201ENST00000320578 SLC10A4Q96EP9 437 aa19.79■□□□□ 0.76
RAB39A-201ENST00000320578 SEL1LQ9UBV2 794 aa19.79■□□□□ 0.76
RAB39A-201ENST00000320578 ODF2LQ9ULJ1 636 aa19.79■□□□□ 0.76
RAB39A-201ENST00000320578 CLEC11AQ9Y240 323 aa19.79■□□□□ 0.76
RAB39A-201ENST00000320578 NPHP3-ACAD11A0A0J9YXS1 232 aa19.79■□□□□ 0.76
RAB39A-201ENST00000320578 A0A1W2PQC6 194 aa19.79■□□□□ 0.76
RAB39A-201ENST00000320578 LGALS16A8MUM7 142 aa19.79■□□□□ 0.76
RAB39A-201ENST00000320578 WDR64B1ANS9 1081 aa19.79■□□□□ 0.76
RAB39A-201ENST00000320578 TEX33O43247 280 aa19.79■□□□□ 0.76
RAB39A-201ENST00000320578 CNMDO75829 334 aa19.79■□□□□ 0.76
RAB39A-201ENST00000320578 ICAM3P32942 547 aa19.79■□□□□ 0.76
RAB39A-201ENST00000320578 QARSP47897 775 aaKnown RBP19.79■□□□□ 0.76
RAB39A-201ENST00000320578 BMT2Q1RMZ1 405 aa19.79■□□□□ 0.76
RAB39A-201ENST00000320578 GPAT2Q6NUI2 795 aa19.79■□□□□ 0.76
RAB39A-201ENST00000320578 EPM2AIP1Q7L775 607 aaPredicted RBP19.79■□□□□ 0.76
RAB39A-201ENST00000320578 C4orf19Q8IY42 314 aa19.79■□□□□ 0.76
RAB39A-201ENST00000320578 PURBQ96QR8 312 aaKnown RBP19.79■□□□□ 0.76
RAB39A-201ENST00000320578 RUSC1Q9BVN2 902 aa19.79■□□□□ 0.76
RAB39A-201ENST00000320578 SLC45A1Q9Y2W3 748 aa19.79■□□□□ 0.76
RAB39A-201ENST00000320578 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.79■□□□□ 0.76
RAB39A-201ENST00000320578 TESPA1A2RU30 521 aaPredicted RBP19.78■□□□□ 0.76
RAB39A-201ENST00000320578 TBCAO75347 108 aaKnown RBP19.78■□□□□ 0.76
RAB39A-201ENST00000320578 TPM2P07951 284 aa19.78■□□□□ 0.76
RAB39A-201ENST00000320578 ZNF131P52739 623 aa19.78■□□□□ 0.76
RAB39A-201ENST00000320578 TRIM14Q14142 442 aa19.78■□□□□ 0.76
RAB39A-201ENST00000320578 ZC3H3Q8IXZ2 948 aaKnown RBP19.78■□□□□ 0.76
RAB39A-201ENST00000320578 SMAP1Q8IYB5 467 aaPredicted RBP19.78■□□□□ 0.76
RAB39A-201ENST00000320578 ANKRD35Q8N283 1001 aa19.78■□□□□ 0.76
RAB39A-201ENST00000320578 PIGOQ8TEQ8 1089 aa19.78■□□□□ 0.76
RAB39A-201ENST00000320578 WRAP73Q9P2S5 460 aaPredicted RBP19.78■□□□□ 0.76
RAB39A-201ENST00000320578 SPATA31C2B4DYI2 1134 aa19.77■□□□□ 0.76
RAB39A-201ENST00000320578 ATP9AO75110 1047 aa19.77■□□□□ 0.76
RAB39A-201ENST00000320578 EIF3JO75822 258 aaKnown RBP19.77■□□□□ 0.76
RAB39A-201ENST00000320578 FKBP3Q00688 224 aaKnown RBP19.77■□□□□ 0.76
RAB39A-201ENST00000320578 STXBP2Q15833 593 aa19.77■□□□□ 0.76
RAB39A-201ENST00000320578 EDRF1Q3B7T1 1238 aa19.77■□□□□ 0.76
RAB39A-201ENST00000320578 ZNF507Q8TCN5 953 aa19.77■□□□□ 0.76
RAB39A-201ENST00000320578 SCFD1Q8WVM8 642 aa19.77■□□□□ 0.76
RAB39A-201ENST00000320578 CEP63Q96MT8 703 aa19.77■□□□□ 0.76
RAB39A-201ENST00000320578 TIPINQ9BVW5 301 aa19.77■□□□□ 0.76
RAB39A-201ENST00000320578 TAB2Q9NYJ8 693 aa19.77■□□□□ 0.76
RAB39A-201ENST00000320578 B4DLN1 442 aa19.76■□□□□ 0.75
RAB39A-201ENST00000320578 DKC1O60832 514 aaKnown RBP eCLIP19.76■□□□□ 0.75
RAB39A-201ENST00000320578 OFD1O75665 1012 aa19.76■□□□□ 0.75
RAB39A-201ENST00000320578 RGS20O76081 388 aa19.76■□□□□ 0.75
RAB39A-201ENST00000320578 KCNA2P16389 499 aa19.76■□□□□ 0.75
RAB39A-201ENST00000320578 EDNRBP24530 442 aa19.76■□□□□ 0.75
RAB39A-201ENST00000320578 GJA5P36382 358 aa19.76■□□□□ 0.75
RAB39A-201ENST00000320578 DNM2P50570 870 aa19.76■□□□□ 0.75
RAB39A-201ENST00000320578 PSMC5P62195 406 aa19.76■□□□□ 0.75
RAB39A-201ENST00000320578 LRRC55Q6ZSA7 311 aa19.76■□□□□ 0.75
RAB39A-201ENST00000320578 CNOT6LQ96LI5 555 aaKnown RBP19.76■□□□□ 0.75
RAB39A-201ENST00000320578 TUBGCP2Q9BSJ2 902 aa19.76■□□□□ 0.75
RAB39A-201ENST00000320578 MOV10L1Q9BXT6 1211 aaKnown RBP19.76■□□□□ 0.75
RAB39A-201ENST00000320578 VPS16Q9H269 839 aa19.76■□□□□ 0.75
RAB39A-201ENST00000320578 KCTD10Q9H3F6 313 aa19.76■□□□□ 0.75
RAB39A-201ENST00000320578 PNMA3Q9UL41 463 aa19.76■□□□□ 0.75
RAB39A-201ENST00000320578 LOXHD1Q8IVV2 1947 aa19.76■□□□□ 0.75
RAB39A-201ENST00000320578 ARHGEF35A5YM69 484 aa19.76■□□□□ 0.75
RAB39A-201ENST00000320578 DDX39AO00148 427 aaKnown RBP19.76■□□□□ 0.75
RAB39A-201ENST00000320578 EIF3DO15371 548 aaKnown RBP eCLIP19.76■□□□□ 0.75
RAB39A-201ENST00000320578 GNA14O95837 355 aa19.76■□□□□ 0.75
RAB39A-201ENST00000320578 LRRC41Q15345 812 aa19.76■□□□□ 0.75
RAB39A-201ENST00000320578 BANK1Q8NDB2 785 aa19.76■□□□□ 0.75
RAB39A-201ENST00000320578 CCDC51Q96ER9 411 aa19.76■□□□□ 0.75
RAB39A-201ENST00000320578 ANKEF1Q9NU02 776 aa19.76■□□□□ 0.75
RAB39A-201ENST00000320578 RBPJLQ9UBG7 517 aa19.76■□□□□ 0.75
RAB39A-201ENST00000320578 LOC102724159A0A0B4J2E5 919 aa19.75■□□□□ 0.75
RAB39A-201ENST00000320578 PWP2Q15269 919 aaKnown RBP19.75■□□□□ 0.75
RAB39A-201ENST00000320578 PPFIBP1Q86W92 1011 aa19.75■□□□□ 0.75
RAB39A-201ENST00000320578 SFR1Q86XK3 245 aa19.75■□□□□ 0.75
RAB39A-201ENST00000320578 FAM133AQ8N9E0 248 aa19.75■□□□□ 0.75
RAB39A-201ENST00000320578 TC2NQ8N9U0 490 aa19.75■□□□□ 0.75
RAB39A-201ENST00000320578 GLIS3Q8NEA6 775 aa19.75■□□□□ 0.75
RAB39A-201ENST00000320578 SHCBP1Q8NEM2 672 aa19.75■□□□□ 0.75
RAB39A-201ENST00000320578 PANX2Q96RD6 677 aa19.75■□□□□ 0.75
RAB39A-201ENST00000320578 PARVGQ9HBI0 331 aa19.75■□□□□ 0.75
RAB39A-201ENST00000320578 PKD2L1Q9P0L9 805 aa19.75■□□□□ 0.75
RAB39A-201ENST00000320578 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.75■□□□□ 0.75
RAB39A-201ENST00000320578 TRAF3IP3Q9Y228 551 aa19.75■□□□□ 0.75
RAB39A-201ENST00000320578 PCDHA10Q9Y5I2 948 aa19.75■□□□□ 0.75
RAB39A-201ENST00000320578 UBE4BO95155 1302 aa19.74■□□□□ 0.75
RAB39A-201ENST00000320578 AKR1B15C9JRZ8 316 aaPredicted RBP19.74■□□□□ 0.75
RAB39A-201ENST00000320578 POTEB2H3BUK9 544 aa19.74■□□□□ 0.75
RAB39A-201ENST00000320578 FAM13AO94988 1023 aa19.74■□□□□ 0.75
RAB39A-201ENST00000320578 CCNE2O96020 404 aa19.74■□□□□ 0.75
RAB39A-201ENST00000320578 ALDH5A1P51649 535 aaPredicted RBP19.74■□□□□ 0.75
RAB39A-201ENST00000320578 MARSP56192 900 aaKnown RBP19.74■□□□□ 0.75
RAB39A-201ENST00000320578 CACNB1Q02641 598 aaPredicted RBP19.74■□□□□ 0.75
RAB39A-201ENST00000320578 MAP1SQ66K74 1059 aaPredicted RBP19.74■□□□□ 0.75
RAB39A-201ENST00000320578 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms