RNA–Protein interactions for RNA: ENST00000320431.7

AMIGO3-201, Transcript of adhesion molecule with Ig like domain 3, humanhuman

APPRIS P1 BASIC

Gene AMIGO3, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMIGO3-201ENST00000320431 SCARF1Q14162 830 aa14.62□□□□□ -0.07
AMIGO3-201ENST00000320431 HLTFQ14527 1009 aaKnown RBP eCLIP14.62□□□□□ -0.07
AMIGO3-201ENST00000320431 MCMDC2Q4G0Z9 681 aa14.62□□□□□ -0.07
AMIGO3-201ENST00000320431 TRIM42Q8IWZ5 723 aa14.62□□□□□ -0.07
AMIGO3-201ENST00000320431 MICALL2Q8IY33 904 aa14.62□□□□□ -0.07
AMIGO3-201ENST00000320431 OGFOD1Q8N543 542 aa14.62□□□□□ -0.07
AMIGO3-201ENST00000320431 MTRQ99707 1265 aa14.62□□□□□ -0.07
AMIGO3-201ENST00000320431 ABCF3Q9NUQ8 709 aa14.62□□□□□ -0.07
AMIGO3-201ENST00000320431 CEP131Q9UPN4 1083 aa14.62□□□□□ -0.07
AMIGO3-201ENST00000320431 COL2A1P02458 1487 aaPredicted RBP14.61□□□□□ -0.07
AMIGO3-201ENST00000320431 LDHBP07195 334 aaKnown RBP14.61□□□□□ -0.07
AMIGO3-201ENST00000320431 SETSIPP0DME0 302 aa14.61□□□□□ -0.07
AMIGO3-201ENST00000320431 CCDC96Q2M329 555 aa14.61□□□□□ -0.07
AMIGO3-201ENST00000320431 KRT40Q6A162 431 aa14.61□□□□□ -0.07
AMIGO3-201ENST00000320431 WDR59Q6PJI9 974 aa14.61□□□□□ -0.07
AMIGO3-201ENST00000320431 ZNF784Q8NCA9 323 aaPredicted RBP14.61□□□□□ -0.07
AMIGO3-201ENST00000320431 ZNF274Q96GC6 653 aaPredicted RBP14.61□□□□□ -0.07
AMIGO3-201ENST00000320431 GPBP1L1Q9HC44 474 aaPredicted RBP14.61□□□□□ -0.07
AMIGO3-201ENST00000320431 LNPEPQ9UIQ6 1025 aa14.61□□□□□ -0.07
AMIGO3-201ENST00000320431 GCOM1H8Y6P7 765 aaPredicted RBP14.61□□□□□ -0.07
AMIGO3-201ENST00000320431 IGF2BP3O00425 579 aaKnown RBP eCLIP14.61□□□□□ -0.07
AMIGO3-201ENST00000320431 PPP6R2O75170 966 aa14.61□□□□□ -0.07
AMIGO3-201ENST00000320431 MYZAPP0CAP1 466 aa14.61□□□□□ -0.07
AMIGO3-201ENST00000320431 ATP2A2P16615 1042 aaKnown RBP14.61□□□□□ -0.07
AMIGO3-201ENST00000320431 SARSP49591 514 aaKnown RBP14.61□□□□□ -0.07
AMIGO3-201ENST00000320431 PHC3Q8NDX5 983 aa14.61□□□□□ -0.07
AMIGO3-201ENST00000320431 ZDHHC15Q96MV8 337 aa14.61□□□□□ -0.07
AMIGO3-201ENST00000320431 TMBIM4Q9HC24 238 aa14.61□□□□□ -0.07
AMIGO3-201ENST00000320431 DDX60LQ5H9U9 1706 aaKnown RBP14.61□□□□□ -0.07
AMIGO3-201ENST00000320431 KRT16P08779 473 aa14.6□□□□□ -0.07
AMIGO3-201ENST00000320431 MAGOHP61326 146 aaKnown RBP14.6□□□□□ -0.07
AMIGO3-201ENST00000320431 CDC37Q16543 378 aaPredicted RBP14.6□□□□□ -0.07
AMIGO3-201ENST00000320431 DBN1Q16643 649 aa14.6□□□□□ -0.07
AMIGO3-201ENST00000320431 CDKAL1Q5VV42 579 aa14.6□□□□□ -0.07
AMIGO3-201ENST00000320431 LDHDQ86WU2 507 aa14.6□□□□□ -0.07
AMIGO3-201ENST00000320431 RBM46Q8TBY0 533 aaKnown RBP14.6□□□□□ -0.07
AMIGO3-201ENST00000320431 CASKIN2Q8WXE0 1202 aa14.6□□□□□ -0.07
AMIGO3-201ENST00000320431 MAGOHBQ96A72 148 aaKnown RBP14.6□□□□□ -0.07
AMIGO3-201ENST00000320431 MYOZ2Q9NPC6 264 aa14.6□□□□□ -0.07
AMIGO3-201ENST00000320431 VPS54Q9P1Q0 977 aa14.6□□□□□ -0.07
AMIGO3-201ENST00000320431 WDR35Q9P2L0 1181 aa14.6□□□□□ -0.07
AMIGO3-201ENST00000320431 LDHCP07864 332 aa14.6□□□□□ -0.07
AMIGO3-201ENST00000320431 HMGB1P09429 215 aaKnown RBP14.6□□□□□ -0.07
AMIGO3-201ENST00000320431 DRD4P21917 467 aa14.6□□□□□ -0.07
AMIGO3-201ENST00000320431 FECHP22830 423 aa14.6□□□□□ -0.07
AMIGO3-201ENST00000320431 COPB1P53618 953 aaKnown RBP14.6□□□□□ -0.07
AMIGO3-201ENST00000320431 TMEM154Q6P9G4 183 aa14.6□□□□□ -0.07
AMIGO3-201ENST00000320431 KRI1Q8N9T8 703 aaKnown RBP14.6□□□□□ -0.07
AMIGO3-201ENST00000320431 CCDC197Q8NCU1 140 aa14.6□□□□□ -0.07
AMIGO3-201ENST00000320431 CTAGE1Q96RT6 745 aa14.6□□□□□ -0.07
AMIGO3-201ENST00000320431 ELAC2Q9BQ52 826 aaKnown RBP14.6□□□□□ -0.07
AMIGO3-201ENST00000320431 AGPAT5Q9NUQ2 364 aa14.6□□□□□ -0.07
AMIGO3-201ENST00000320431 RHBDL2Q9NX52 303 aa14.6□□□□□ -0.07
AMIGO3-201ENST00000320431 DLGAP2Q9P1A6 1054 aa14.6□□□□□ -0.07
AMIGO3-201ENST00000320431 SHBGP04278 402 aa14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 PLEKP08567 350 aaPredicted RBP14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 ZAP70P43403 619 aa14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 KLK7P49862 253 aa14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 RNASELQ05823 741 aaKnown RBP14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 ENOX2Q16206 610 aaKnown RBP14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 FKBP1CQ5VVH2 108 aa14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 LBHD1Q9BQE6 289 aaPredicted RBP14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 PREBQ9HCU5 417 aa14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 SMAPO00193 183 aa14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 CTNND1O60716 968 aaKnown RBP14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 NPM3O75607 178 aaKnown RBP14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 NQO1P15559 274 aaKnown RBP14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 MYBPC3Q14896 1274 aa14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 ACBD5Q5T8D3 534 aaPredicted RBP14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 MIGA2Q7L4E1 593 aa14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 DDX42Q86XP3 938 aaKnown RBP eCLIP14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 ELOA2Q8IYF1 753 aaPredicted RBP14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 TEKT1Q969V4 418 aa14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 PPP1R12CQ9BZL4 782 aa14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 BLZF1Q9H2G9 400 aa14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 RRAGCQ9HB90 399 aa14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 PAG1Q9NWQ8 432 aa14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 HPS5Q9UPZ3 1129 aa14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 LUC7L2Q9Y383 392 aaKnown RBP14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 UBOX5O94941 541 aa14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 ALDH3A1P30838 453 aa14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 EPS15P42566 896 aa14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 CUL4BQ13620 913 aa14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 TSR1Q2NL82 804 aaKnown RBP14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 IFT20Q8IY31 132 aa14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 ARFGAP2Q8N6H7 521 aa14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 CCHCR1Q8TD31 782 aa14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 NSUN4Q96CB9 384 aaKnown RBP14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 BICD1Q96G01 975 aa14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 KRT12Q99456 494 aa14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 MAF1Q9H063 256 aa14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 ANAPC4Q9UJX5 808 aa14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 IQSEC3Q9UPP2 1182 aaPredicted RBP14.59□□□□□ -0.07
AMIGO3-201ENST00000320431 TPD52L2O43399 206 aaKnown RBP14.58□□□□□ -0.08
AMIGO3-201ENST00000320431 ERCC5P28715 1186 aaPredicted RBP14.58□□□□□ -0.08
AMIGO3-201ENST00000320431 CTNNA1P35221 906 aaKnown RBP14.58□□□□□ -0.08
AMIGO3-201ENST00000320431 PPP2R2AP63151 447 aa14.58□□□□□ -0.08
AMIGO3-201ENST00000320431 GALNT17Q6IS24 598 aa14.58□□□□□ -0.08
AMIGO3-201ENST00000320431 FAM47EQ6ZV65 393 aa14.58□□□□□ -0.08
AMIGO3-201ENST00000320431 ATL2Q8NHH9 583 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms