RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 TRIM10Q9UDY6 481 aa8.37□□□□□ -1.07
IFT88-201ENST00000319980 MRFAP1Q9Y605 127 aa8.37□□□□□ -1.07
IFT88-201ENST00000319980 A0A1W2PQJ5 194 aa8.36□□□□□ -1.07
IFT88-201ENST00000319980 TBCAO75347 108 aaKnown RBP8.36□□□□□ -1.07
IFT88-201ENST00000319980 PRPF6O94906 941 aaKnown RBP8.36□□□□□ -1.07
IFT88-201ENST00000319980 IPO7O95373 1038 aaKnown RBP8.36□□□□□ -1.07
IFT88-201ENST00000319980 ITGB5P18084 799 aa8.36□□□□□ -1.07
IFT88-201ENST00000319980 VCAM1P19320 739 aa8.36□□□□□ -1.07
IFT88-201ENST00000319980 NR2F2P24468 414 aa8.36□□□□□ -1.07
IFT88-201ENST00000319980 KNOP1Q1ED39 458 aaKnown RBP8.36□□□□□ -1.07
IFT88-201ENST00000319980 RINT1Q6NUQ1 792 aa8.36□□□□□ -1.07
IFT88-201ENST00000319980 SLC35F6Q8N357 371 aa8.36□□□□□ -1.07
IFT88-201ENST00000319980 CGNQ9P2M7 1197 aaKnown RBP8.36□□□□□ -1.07
IFT88-201ENST00000319980 PLAGL2Q9UPG8 496 aa8.36□□□□□ -1.07
IFT88-201ENST00000319980 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.36□□□□□ -1.07
IFT88-201ENST00000319980 PSME4Q14997 1843 aa8.36□□□□□ -1.07
IFT88-201ENST00000319980 FER1L6Q2WGJ9 1857 aa8.36□□□□□ -1.07
IFT88-201ENST00000319980 FZD9O00144 591 aa8.36□□□□□ -1.07
IFT88-201ENST00000319980 GCNT3O95395 438 aa8.36□□□□□ -1.07
IFT88-201ENST00000319980 MYBP10242 640 aa8.36□□□□□ -1.07
IFT88-201ENST00000319980 CYLC1P35663 651 aaPredicted RBP8.36□□□□□ -1.07
IFT88-201ENST00000319980 HSD17B4P51659 736 aa8.36□□□□□ -1.07
IFT88-201ENST00000319980 SETQ01105 290 aaPredicted RBP8.36□□□□□ -1.07
IFT88-201ENST00000319980 CYP27A1Q02318 531 aa8.36□□□□□ -1.07
IFT88-201ENST00000319980 RRAGAQ7L523 313 aa8.36□□□□□ -1.07
IFT88-201ENST00000319980 ZNF784Q8NCA9 323 aaPredicted RBP8.36□□□□□ -1.07
IFT88-201ENST00000319980 NLGN2Q8NFZ4 835 aa8.36□□□□□ -1.07
IFT88-201ENST00000319980 CLEC4DQ8WXI8 215 aa8.36□□□□□ -1.07
IFT88-201ENST00000319980 ZKSCAN4Q969J2 545 aaPredicted RBP8.36□□□□□ -1.07
IFT88-201ENST00000319980 CCDC42Q96M95 316 aa8.36□□□□□ -1.07
IFT88-201ENST00000319980 CEP63Q96MT8 703 aa8.36□□□□□ -1.07
IFT88-201ENST00000319980 MXRA8Q9BRK3 442 aa8.36□□□□□ -1.07
IFT88-201ENST00000319980 CRACR2AQ9BSW2 395 aa8.36□□□□□ -1.07
IFT88-201ENST00000319980 WDR11Q9BZH6 1224 aa8.36□□□□□ -1.07
IFT88-201ENST00000319980 UNC45AQ9H3U1 944 aa8.36□□□□□ -1.07
IFT88-201ENST00000319980 GPBP1L1Q9HC44 474 aaPredicted RBP8.36□□□□□ -1.07
IFT88-201ENST00000319980 TUFT1Q9NNX1 390 aa8.36□□□□□ -1.07
IFT88-201ENST00000319980 KCNH7Q9NS40 1196 aa8.36□□□□□ -1.07
IFT88-201ENST00000319980 WRAP73Q9P2S5 460 aaPredicted RBP8.36□□□□□ -1.07
IFT88-201ENST00000319980 CTDP1Q9Y5B0 961 aaPredicted RBP8.36□□□□□ -1.07
IFT88-201ENST00000319980 CTAGE9A4FU28 777 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 CETN3O15182 167 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 GNA14O95837 355 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 PLEKP08567 350 aaPredicted RBP8.35□□□□□ -1.07
IFT88-201ENST00000319980 YBX3P16989 372 aaKnown RBP eCLIP8.35□□□□□ -1.07
IFT88-201ENST00000319980 HERVK_113P62684 666 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 KRT83P78385 493 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 PPP2R3AQ06190 1150 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 KCNA1Q09470 495 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 KCNMA1Q12791 1236 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 MUM1L1Q5H9M0 696 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 CCDC122Q5T0U0 273 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 FBXO38Q6PIJ6 1188 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 CACNA2D4Q7Z3S7 1137 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 MCF2L2Q86YR7 1114 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 IL31RAQ8NI17 732 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 TEKT3Q9BXF9 490 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 RPAP3Q9H6T3 665 aaPredicted RBP8.35□□□□□ -1.07
IFT88-201ENST00000319980 ZSWIM4Q9H7M6 989 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 SLC38A10Q9HBR0 1119 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 ZC3H4Q9UPT8 1303 aaKnown RBP8.35□□□□□ -1.07
IFT88-201ENST00000319980 LRRC53A6NM62 1247 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 EFCAB8A8MWE9 144 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 TADA3O75528 432 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 HOXD13P35453 343 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 EDRF1Q3B7T1 1238 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 ANGEL2Q5VTE6 544 aaKnown RBP8.35□□□□□ -1.07
IFT88-201ENST00000319980 KIAA1328Q86T90 577 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 TRIM59Q8IWR1 403 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 CCDC170Q8IYT3 715 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 MYCT1Q8N699 235 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 BANK1Q8NDB2 785 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 NEK11Q8NG66 645 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 IQCDQ96DY2 449 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 WRNIP1Q96S55 665 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 HAUS4Q9H6D7 363 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 NLRC4Q9NPP4 1024 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 FAM13AO94988 1023 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 EIF2AK2P19525 551 aaKnown RBP8.35□□□□□ -1.07
IFT88-201ENST00000319980 EPS15P42566 896 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 RPS6P62753 249 aaKnown RBP8.35□□□□□ -1.07
IFT88-201ENST00000319980 C1orf186Q6ZWK4 172 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 KRT26Q7Z3Y9 468 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 NACC1Q96RE7 527 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 LXNQ9BS40 222 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 CCDC94Q9BW85 323 aaPredicted RBP8.35□□□□□ -1.07
IFT88-201ENST00000319980 LACRTQ9GZZ8 138 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 EPC1Q9H2F5 836 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 ARHGAP20Q9P2F6 1191 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 PPP1R9AQ9ULJ8 1098 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 TRAF3IP3Q9Y228 551 aa8.35□□□□□ -1.07
IFT88-201ENST00000319980 ZNF541Q9H0D2 1346 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 NMT1P30419 496 aaKnown RBP8.34□□□□□ -1.07
IFT88-201ENST00000319980 APBA1Q02410 837 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 MKRN3Q13064 507 aaKnown RBP8.34□□□□□ -1.07
IFT88-201ENST00000319980 EPHA7Q15375 998 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 DCAF15Q66K64 600 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 NSMFQ6X4W1 530 aa8.34□□□□□ -1.07
IFT88-201ENST00000319980 EPM2AIP1Q7L775 607 aaPredicted RBP8.34□□□□□ -1.07
IFT88-201ENST00000319980 TRMT1LQ7Z2T5 733 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms