RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 DUSP28Q4G0W2 176 aa30.68■■■□□ 2.5
CTDNEP1-201ENST00000318988 NAALADL2Q58DX5 795 aa30.68■■■□□ 2.5
CTDNEP1-201ENST00000318988 SEPT1Q8WYJ6 367 aa30.68■■■□□ 2.5
CTDNEP1-201ENST00000318988 RAD54LQ92698 747 aa30.68■■■□□ 2.5
CTDNEP1-201ENST00000318988 COPS5Q92905 334 aa30.68■■■□□ 2.5
CTDNEP1-201ENST00000318988 FAM184BQ9ULE4 1060 aa30.68■■■□□ 2.5
CTDNEP1-201ENST00000318988 ADCY3O60266 1144 aa30.68■■■□□ 2.5
CTDNEP1-201ENST00000318988 IGHA2P01877 340 aa30.68■■■□□ 2.5
CTDNEP1-201ENST00000318988 AFMP43652 599 aa30.68■■■□□ 2.5
CTDNEP1-201ENST00000318988 PSMC5P62195 406 aa30.68■■■□□ 2.5
CTDNEP1-201ENST00000318988 AMPD3Q01432 767 aa30.68■■■□□ 2.5
CTDNEP1-201ENST00000318988 ZSCAN23Q3MJ62 389 aa30.68■■■□□ 2.5
CTDNEP1-201ENST00000318988 ABHD15Q6UXT9 468 aa30.68■■■□□ 2.5
CTDNEP1-201ENST00000318988 SV2BQ7L1I2 683 aa30.68■■■□□ 2.5
CTDNEP1-201ENST00000318988 LARP4BQ92615 738 aaKnown RBP30.68■■■□□ 2.5
CTDNEP1-201ENST00000318988 ATP6V0A1Q93050 837 aa30.68■■■□□ 2.5
CTDNEP1-201ENST00000318988 PAGE5Q96GU1 130 aa30.68■■■□□ 2.5
CTDNEP1-201ENST00000318988 NACC1Q96RE7 527 aa30.68■■■□□ 2.5
CTDNEP1-201ENST00000318988 C11orf97A0A1B0GVM6 126 aaPredicted RBP30.67■■■□□ 2.5
CTDNEP1-201ENST00000318988 SMPD1P17405 629 aa30.67■■■□□ 2.5
CTDNEP1-201ENST00000318988 SWSAP1Q6NVH7 229 aa30.67■■■□□ 2.5
CTDNEP1-201ENST00000318988 GABBR1Q9UBS5 961 aa30.67■■■□□ 2.5
CTDNEP1-201ENST00000318988 ATG7O95352 703 aa30.66■■■□□ 2.5
CTDNEP1-201ENST00000318988 DHX8Q14562 1220 aaKnown RBP30.66■■■□□ 2.5
CTDNEP1-201ENST00000318988 POSTNQ15063 836 aa30.66■■■□□ 2.5
CTDNEP1-201ENST00000318988 LRRC27Q9C0I9 530 aa30.66■■■□□ 2.5
CTDNEP1-201ENST00000318988 TRIM17Q9Y577 477 aa30.66■■■□□ 2.5
CTDNEP1-201ENST00000318988 SSBP05455 408 aaKnown RBP eCLIP30.65■■■□□ 2.5
CTDNEP1-201ENST00000318988 ARHGAP1Q07960 439 aa30.65■■■□□ 2.5
CTDNEP1-201ENST00000318988 TMEM63BQ5T3F8 832 aa30.65■■■□□ 2.5
CTDNEP1-201ENST00000318988 FAM160B1Q5W0V3 765 aa30.65■■■□□ 2.5
CTDNEP1-201ENST00000318988 CKAP2LQ8IYA6 745 aa30.65■■■□□ 2.5
CTDNEP1-201ENST00000318988 OR6J1Q8NGC5 347 aa30.65■■■□□ 2.5
CTDNEP1-201ENST00000318988 BLOC1S4Q9NUP1 217 aa30.65■■■□□ 2.5
CTDNEP1-201ENST00000318988 E9PMD0 336 aa30.64■■■□□ 2.5
CTDNEP1-201ENST00000318988 ELNP15502 786 aa30.64■■■□□ 2.5
CTDNEP1-201ENST00000318988 MCM6Q14566 821 aa30.64■■■□□ 2.5
CTDNEP1-201ENST00000318988 GJC2Q5T442 439 aaPredicted RBP30.64■■■□□ 2.5
CTDNEP1-201ENST00000318988 KCNK18Q7Z418 384 aa30.64■■■□□ 2.5
CTDNEP1-201ENST00000318988 GRAMD1CQ8IYS0 662 aa30.64■■■□□ 2.5
CTDNEP1-201ENST00000318988 EMID1Q96A84 441 aaPredicted RBP30.64■■■□□ 2.5
CTDNEP1-201ENST00000318988 GPR20Q99678 358 aa30.64■■■□□ 2.5
CTDNEP1-201ENST00000318988 AZI2Q9H6S1 392 aa30.64■■■□□ 2.5
CTDNEP1-201ENST00000318988 ZNF302Q9NR11 478 aa30.64■■■□□ 2.5
CTDNEP1-201ENST00000318988 CASP8AP2Q9UKL3 1982 aa30.64■■■□□ 2.49
CTDNEP1-201ENST00000318988 GSTTP1A0A1W2PQM5 241 aa30.63■■■□□ 2.49
CTDNEP1-201ENST00000318988 HMGCRP04035 888 aa30.63■■■□□ 2.49
CTDNEP1-201ENST00000318988 PLA2G4BP0C869 781 aa30.63■■■□□ 2.49
CTDNEP1-201ENST00000318988 AKR1A1P14550 325 aa30.63■■■□□ 2.49
CTDNEP1-201ENST00000318988 TCF7P36402 384 aaPredicted RBP30.63■■■□□ 2.49
CTDNEP1-201ENST00000318988 HSDL1Q3SXM5 330 aa30.63■■■□□ 2.49
CTDNEP1-201ENST00000318988 C4orf19Q8IY42 314 aa30.63■■■□□ 2.49
CTDNEP1-201ENST00000318988 PXYLP1Q8TE99 480 aa30.63■■■□□ 2.49
CTDNEP1-201ENST00000318988 STAMQ92783 540 aa30.63■■■□□ 2.49
CTDNEP1-201ENST00000318988 CCDC43Q96MW1 224 aaKnown RBP30.63■■■□□ 2.49
CTDNEP1-201ENST00000318988 KBTBD4Q9NVX7 518 aa30.63■■■□□ 2.49
CTDNEP1-201ENST00000318988 TELO2Q9Y4R8 837 aa30.63■■■□□ 2.49
CTDNEP1-201ENST00000318988 FOXN1O15353 648 aa30.63■■■□□ 2.49
CTDNEP1-201ENST00000318988 SMC2O95347 1197 aa30.63■■■□□ 2.49
CTDNEP1-201ENST00000318988 PNOCQ13519 176 aa30.63■■■□□ 2.49
CTDNEP1-201ENST00000318988 SH3RF1Q7Z6J0 888 aa30.63■■■□□ 2.49
CTDNEP1-201ENST00000318988 CCDC60Q8IWA6 550 aaPredicted RBP30.63■■■□□ 2.49
CTDNEP1-201ENST00000318988 PPTC7Q8NI37 304 aa30.63■■■□□ 2.49
CTDNEP1-201ENST00000318988 LRRC15Q8TF66 581 aa30.63■■■□□ 2.49
CTDNEP1-201ENST00000318988 A0A087WWV3 80 aa30.62■■■□□ 2.49
CTDNEP1-201ENST00000318988 SYCE3A1L190 88 aa30.62■■■□□ 2.49
CTDNEP1-201ENST00000318988 GTPBP6O43824 516 aaPredicted RBP30.62■■■□□ 2.49
CTDNEP1-201ENST00000318988 LYPLA2O95372 231 aa30.62■■■□□ 2.49
CTDNEP1-201ENST00000318988 EYA4O95677 639 aa30.62■■■□□ 2.49
CTDNEP1-201ENST00000318988 MYL1P05976 194 aa30.62■■■□□ 2.49
CTDNEP1-201ENST00000318988 CYBAP13498 195 aa30.62■■■□□ 2.49
CTDNEP1-201ENST00000318988 CNGA1P29973 690 aa30.62■■■□□ 2.49
CTDNEP1-201ENST00000318988 PSMC6P62333 389 aa30.62■■■□□ 2.49
CTDNEP1-201ENST00000318988 MDM2Q00987 491 aaPredicted RBP30.62■■■□□ 2.49
CTDNEP1-201ENST00000318988 UGCGQ16739 394 aa30.62■■■□□ 2.49
CTDNEP1-201ENST00000318988 SLAIN1Q8ND83 568 aa30.62■■■□□ 2.49
CTDNEP1-201ENST00000318988 PIGOQ8TEQ8 1089 aa30.62■■■□□ 2.49
CTDNEP1-201ENST00000318988 BMP2KQ9NSY1 1161 aaPredicted RBP30.62■■■□□ 2.49
CTDNEP1-201ENST00000318988 KIAA1468Q9P260 1216 aa30.62■■■□□ 2.49
CTDNEP1-201ENST00000318988 DOCK5Q9H7D0 1870 aa30.61■■■□□ 2.49
CTDNEP1-201ENST00000318988 CACNB2Q08289 660 aaPredicted RBP30.61■■■□□ 2.49
CTDNEP1-201ENST00000318988 UTP14CQ5TAP6 766 aaKnown RBP30.61■■■□□ 2.49
CTDNEP1-201ENST00000318988 AFG1LQ8WV93 481 aa30.61■■■□□ 2.49
CTDNEP1-201ENST00000318988 AP5M1Q9H0R1 490 aa30.61■■■□□ 2.49
CTDNEP1-201ENST00000318988 WRAP73Q9P2S5 460 aaPredicted RBP30.61■■■□□ 2.49
CTDNEP1-201ENST00000318988 DYNC1LI2O43237 492 aaPredicted RBP30.6■■■□□ 2.49
CTDNEP1-201ENST00000318988 STAT5BP51692 787 aa30.6■■■□□ 2.49
CTDNEP1-201ENST00000318988 RBM43Q6ZSC3 357 aaKnown RBP30.6■■■□□ 2.49
CTDNEP1-201ENST00000318988 OTUD6AQ7L8S5 288 aa30.6■■■□□ 2.49
CTDNEP1-201ENST00000318988 GLG1Q92896 1179 aa30.6■■■□□ 2.49
CTDNEP1-201ENST00000318988 SMARCE1Q969G3 411 aa30.6■■■□□ 2.49
CTDNEP1-201ENST00000318988 BHMT2Q9H2M3 363 aa30.6■■■□□ 2.49
CTDNEP1-201ENST00000318988 Q9Y3F1 56 aa30.6■■■□□ 2.49
CTDNEP1-201ENST00000318988 IGKV6D-21A0A0A0MT36 114 aa30.59■■■□□ 2.49
CTDNEP1-201ENST00000318988 XRCC6P12956 609 aaKnown RBP eCLIP30.59■■■□□ 2.49
CTDNEP1-201ENST00000318988 PRKAR2AP13861 404 aaKnown RBP30.59■■■□□ 2.49
CTDNEP1-201ENST00000318988 YWHABP31946 246 aaKnown RBP30.59■■■□□ 2.49
CTDNEP1-201ENST00000318988 SASS6Q6UVJ0 657 aa30.59■■■□□ 2.49
CTDNEP1-201ENST00000318988 TLK2Q86UE8 772 aa30.59■■■□□ 2.49
CTDNEP1-201ENST00000318988 SYT2Q8N9I0 419 aaPredicted RBP30.59■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms