RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 TECP42680 631 aa18.92■□□□□ 0.62
SCAMP4-201ENST00000316097 ZNF280AP59817 542 aaPredicted RBP18.92■□□□□ 0.62
SCAMP4-201ENST00000316097 SKOR1P84550 965 aa18.92■□□□□ 0.62
SCAMP4-201ENST00000316097 GPIHBP1Q8IV16 184 aa18.92■□□□□ 0.62
SCAMP4-201ENST00000316097 CNOT6LQ96LI5 555 aaKnown RBP18.92■□□□□ 0.62
SCAMP4-201ENST00000316097 TEPSINQ96N21 525 aa18.92■□□□□ 0.62
SCAMP4-201ENST00000316097 DUSP9Q99956 384 aaKnown RBP18.92■□□□□ 0.62
SCAMP4-201ENST00000316097 IFIH1Q9BYX4 1025 aaKnown RBP18.92■□□□□ 0.62
SCAMP4-201ENST00000316097 RIC8AQ9NPQ8 531 aa18.92■□□□□ 0.62
SCAMP4-201ENST00000316097 ESYT2A0FGR8 921 aa18.92■□□□□ 0.62
SCAMP4-201ENST00000316097 CAP2P40123 477 aa18.92■□□□□ 0.62
SCAMP4-201ENST00000316097 USP8P40818 1118 aa18.92■□□□□ 0.62
SCAMP4-201ENST00000316097 MTIF2P46199 727 aaKnown RBP18.92■□□□□ 0.62
SCAMP4-201ENST00000316097 ALS2CLQ60I27 953 aa18.92■□□□□ 0.62
SCAMP4-201ENST00000316097 HAUS3Q68CZ6 603 aa18.92■□□□□ 0.62
SCAMP4-201ENST00000316097 EMBQ6PCB8 327 aa18.92■□□□□ 0.62
SCAMP4-201ENST00000316097 ZIM3Q96PE6 472 aa18.92■□□□□ 0.62
SCAMP4-201ENST00000316097 SH2D4AQ9H788 454 aa18.92■□□□□ 0.62
SCAMP4-201ENST00000316097 ZEB2O60315 1214 aa18.91■□□□□ 0.62
SCAMP4-201ENST00000316097 TXKP42681 527 aa18.91■□□□□ 0.62
SCAMP4-201ENST00000316097 ITIH3Q06033 890 aa18.91■□□□□ 0.62
SCAMP4-201ENST00000316097 KCNB1Q14721 858 aa18.91■□□□□ 0.62
SCAMP4-201ENST00000316097 FKBP1CQ5VVH2 108 aa18.91■□□□□ 0.62
SCAMP4-201ENST00000316097 ARL6IP4Q66PJ3 421 aaKnown RBP18.91■□□□□ 0.62
SCAMP4-201ENST00000316097 ZNF572Q7Z3I7 529 aaPredicted RBP18.91■□□□□ 0.62
SCAMP4-201ENST00000316097 CNPY4Q8N129 248 aa18.91■□□□□ 0.62
SCAMP4-201ENST00000316097 GIMAP8Q8ND71 665 aaPredicted RBP18.91■□□□□ 0.62
SCAMP4-201ENST00000316097 RUBCNQ92622 972 aa18.91■□□□□ 0.62
SCAMP4-201ENST00000316097 P2RX7Q99572 595 aaKnown RBP18.91■□□□□ 0.62
SCAMP4-201ENST00000316097 FHDC1Q9C0D6 1143 aaPredicted RBP18.91■□□□□ 0.62
SCAMP4-201ENST00000316097 H0YHG0 523 aa18.91■□□□□ 0.62
SCAMP4-201ENST00000316097 KIAA0754O94854 1291 aa18.91■□□□□ 0.62
SCAMP4-201ENST00000316097 KRT14P02533 472 aa18.91■□□□□ 0.62
SCAMP4-201ENST00000316097 NOC3LQ8WTT2 800 aaKnown RBP18.91■□□□□ 0.62
SCAMP4-201ENST00000316097 GMCL1Q96IK5 515 aa18.91■□□□□ 0.62
SCAMP4-201ENST00000316097 NOC4LQ9BVI4 516 aaKnown RBP18.91■□□□□ 0.62
SCAMP4-201ENST00000316097 HYOU1Q9Y4L1 999 aa18.91■□□□□ 0.62
SCAMP4-201ENST00000316097 PCDHA13Q9Y5I0 950 aa18.91■□□□□ 0.62
SCAMP4-201ENST00000316097 NBPF12Q5TAG4 269 aaPredicted RBP18.9■□□□□ 0.62
SCAMP4-201ENST00000316097 SYDE2Q5VT97 1194 aa18.9■□□□□ 0.62
SCAMP4-201ENST00000316097 C8orf74Q6P047 294 aa18.9■□□□□ 0.62
SCAMP4-201ENST00000316097 DLK2Q6UY11 383 aa18.9■□□□□ 0.62
SCAMP4-201ENST00000316097 B4GALNT4Q76KP1 1039 aa18.9■□□□□ 0.62
SCAMP4-201ENST00000316097 OTUD6BQ8N6M0 293 aa18.9■□□□□ 0.62
SCAMP4-201ENST00000316097 LRRC15Q8TF66 581 aa18.9■□□□□ 0.62
SCAMP4-201ENST00000316097 CUL5Q93034 780 aa18.9■□□□□ 0.62
SCAMP4-201ENST00000316097 ARHGEF10LQ9HCE6 1279 aa18.9■□□□□ 0.62
SCAMP4-201ENST00000316097 FBXO28Q9NVF7 368 aa18.9■□□□□ 0.62
SCAMP4-201ENST00000316097 PRR12Q9ULL5 1215 aa18.9■□□□□ 0.62
SCAMP4-201ENST00000316097 TMX2Q9Y320 296 aa18.9■□□□□ 0.62
SCAMP4-201ENST00000316097 MYO1FO00160 1098 aa18.9■□□□□ 0.62
SCAMP4-201ENST00000316097 NCK2O43639 380 aa18.9■□□□□ 0.62
SCAMP4-201ENST00000316097 RHOBTB3O94955 611 aa18.9■□□□□ 0.62
SCAMP4-201ENST00000316097 NNTQ13423 1086 aa18.9■□□□□ 0.62
SCAMP4-201ENST00000316097 DEFB129Q9H1M3 183 aa18.9■□□□□ 0.62
SCAMP4-201ENST00000316097 COL2A1P02458 1487 aaPredicted RBP18.89■□□□□ 0.62
SCAMP4-201ENST00000316097 PHF20L1A8MW92 1017 aa18.89■□□□□ 0.62
SCAMP4-201ENST00000316097 hCG_1984214I3L0E3 225 aa18.89■□□□□ 0.62
SCAMP4-201ENST00000316097 NKRFO15226 690 aaKnown RBP eCLIP18.89■□□□□ 0.622e-6■□□□□ 8.4
SCAMP4-201ENST00000316097 TCP1P17987 556 aaKnown RBP18.89■□□□□ 0.62
SCAMP4-201ENST00000316097 ZNF713Q8N859 430 aaPredicted RBP18.89■□□□□ 0.62
SCAMP4-201ENST00000316097 PRPF38AQ8NAV1 312 aaKnown RBP18.89■□□□□ 0.62
SCAMP4-201ENST00000316097 CAVIN3Q969G5 261 aa18.89■□□□□ 0.62
SCAMP4-201ENST00000316097 PRLRP16471 622 aa18.89■□□□□ 0.61
SCAMP4-201ENST00000316097 HOXA13P31271 388 aaPredicted RBP18.89■□□□□ 0.61
SCAMP4-201ENST00000316097 CLK2P49760 499 aaKnown RBP18.89■□□□□ 0.61
SCAMP4-201ENST00000316097 CCDC174Q6PII3 467 aa18.89■□□□□ 0.61
SCAMP4-201ENST00000316097 ALS2CR12Q96Q35 445 aa18.89■□□□□ 0.61
SCAMP4-201ENST00000316097 ARHGAP20Q9P2F6 1191 aa18.89■□□□□ 0.61
SCAMP4-201ENST00000316097 OR52Z1P0C646 297 aa18.88■□□□□ 0.61
SCAMP4-201ENST00000316097 UBA7P41226 1012 aa18.88■□□□□ 0.61
SCAMP4-201ENST00000316097 PAFAH1B1P43034 410 aa18.88■□□□□ 0.61
SCAMP4-201ENST00000316097 KIF11P52732 1056 aa18.88■□□□□ 0.61
SCAMP4-201ENST00000316097 MRPL12P52815 198 aaKnown RBP18.88■□□□□ 0.61
SCAMP4-201ENST00000316097 CDK17Q00537 523 aa18.88■□□□□ 0.61
SCAMP4-201ENST00000316097 MIIPQ5JXC2 388 aa18.88■□□□□ 0.61
SCAMP4-201ENST00000316097 ANKRD40Q6AI12 368 aa18.88■□□□□ 0.61
SCAMP4-201ENST00000316097 TRPM4Q8TD43 1214 aa18.88■□□□□ 0.61
SCAMP4-201ENST00000316097 P2RX5Q93086 422 aa18.88■□□□□ 0.61
SCAMP4-201ENST00000316097 RBM12Q9NTZ6 932 aaKnown RBP18.88■□□□□ 0.61
SCAMP4-201ENST00000316097 TBC1D12O60347 775 aa18.88■□□□□ 0.61
SCAMP4-201ENST00000316097 RPS12P25398 132 aaKnown RBP18.88■□□□□ 0.61
SCAMP4-201ENST00000316097 GSCP56915 257 aaPredicted RBP18.88■□□□□ 0.61
SCAMP4-201ENST00000316097 ANGEL2Q5VTE6 544 aaKnown RBP18.88■□□□□ 0.61
SCAMP4-201ENST00000316097 TBC1D5Q92609 795 aa18.88■□□□□ 0.61
SCAMP4-201ENST00000316097 DHTKD1Q96HY7 919 aaPredicted RBP18.88■□□□□ 0.61
SCAMP4-201ENST00000316097 CCDC43Q96MW1 224 aaKnown RBP18.88■□□□□ 0.61
SCAMP4-201ENST00000316097 A0A1W2PQJ5 194 aa18.87■□□□□ 0.61
SCAMP4-201ENST00000316097 A6NNZ2 444 aa18.87■□□□□ 0.61
SCAMP4-201ENST00000316097 MEFVO15553 781 aaPredicted RBP18.87■□□□□ 0.61
SCAMP4-201ENST00000316097 CCNE1P24864 410 aa18.87■□□□□ 0.61
SCAMP4-201ENST00000316097 MAP2K2P36507 400 aa18.87■□□□□ 0.61
SCAMP4-201ENST00000316097 EPS15P42566 896 aa18.87■□□□□ 0.61
SCAMP4-201ENST00000316097 TUBB8Q3ZCM7 444 aa18.87■□□□□ 0.61
SCAMP4-201ENST00000316097 FBXO11Q86XK2 927 aa18.87■□□□□ 0.61
SCAMP4-201ENST00000316097 ANKRD13CQ8N6S4 541 aa18.87■□□□□ 0.61
SCAMP4-201ENST00000316097 RNPC3Q96LT9 517 aaKnown RBP18.87■□□□□ 0.61
SCAMP4-201ENST00000316097 AMNQ9BXJ7 453 aa18.87■□□□□ 0.61
SCAMP4-201ENST00000316097 ZNF341Q9BYN7 854 aa18.87■□□□□ 0.61
SCAMP4-201ENST00000316097 MEIS2O14770 477 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms