RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 CEP63Q96MT8 703 aa20.32■□□□□ 0.84
CCDC43-201ENST00000315286 PURBQ96QR8 312 aaKnown RBP20.32■□□□□ 0.84
CCDC43-201ENST00000315286 SPON1Q9HCB6 807 aa20.32■□□□□ 0.84
CCDC43-201ENST00000315286 FRMPD4Q14CM0 1322 aa20.32■□□□□ 0.84
CCDC43-201ENST00000315286 SFI1A8K8P3 1242 aa20.31■□□□□ 0.84
CCDC43-201ENST00000315286 DHX15O43143 795 aaKnown RBP20.31■□□□□ 0.84
CCDC43-201ENST00000315286 MUTP22033 750 aa20.31■□□□□ 0.84
CCDC43-201ENST00000315286 HOXD13P35453 343 aa20.31■□□□□ 0.84
CCDC43-201ENST00000315286 SUPT20HL1Q3ZLR7 823 aa20.31■□□□□ 0.84
CCDC43-201ENST00000315286 WDR59Q6PJI9 974 aa20.31■□□□□ 0.84
CCDC43-201ENST00000315286 NSMFQ6X4W1 530 aa20.31■□□□□ 0.84
CCDC43-201ENST00000315286 ACRBPQ8NEB7 543 aa20.31■□□□□ 0.84
CCDC43-201ENST00000315286 REPS2Q8NFH8 660 aa20.31■□□□□ 0.84
CCDC43-201ENST00000315286 NACC1Q96RE7 527 aa20.31■□□□□ 0.84
CCDC43-201ENST00000315286 AGO4Q9HCK5 861 aaKnown RBP20.31■□□□□ 0.84
CCDC43-201ENST00000315286 JADE2Q9NQC1 790 aa20.31■□□□□ 0.84
CCDC43-201ENST00000315286 SIK3Q9Y2K2 1263 aa20.31■□□□□ 0.84
CCDC43-201ENST00000315286 TBCAO75347 108 aaKnown RBP20.31■□□□□ 0.84
CCDC43-201ENST00000315286 MYBP10242 640 aa20.31■□□□□ 0.84
CCDC43-201ENST00000315286 DSG3P32926 999 aa20.31■□□□□ 0.84
CCDC43-201ENST00000315286 GNG11P61952 73 aa20.31■□□□□ 0.84
CCDC43-201ENST00000315286 PGM5Q15124 567 aa20.31■□□□□ 0.84
CCDC43-201ENST00000315286 FIGNQ5HY92 759 aa20.31■□□□□ 0.84
CCDC43-201ENST00000315286 DLK2Q6UY11 383 aa20.31■□□□□ 0.84
CCDC43-201ENST00000315286 RMDN3Q96TC7 470 aa20.31■□□□□ 0.84
CCDC43-201ENST00000315286 FHDC1Q9C0D6 1143 aaPredicted RBP20.31■□□□□ 0.84
CCDC43-201ENST00000315286 L2HGDHQ9H9P8 463 aa20.31■□□□□ 0.84
CCDC43-201ENST00000315286 LZTFL1Q9NQ48 299 aa20.31■□□□□ 0.84
CCDC43-201ENST00000315286 RNF146Q9NTX7 359 aa20.31■□□□□ 0.84
CCDC43-201ENST00000315286 PRPF6O94906 941 aaKnown RBP20.3■□□□□ 0.84
CCDC43-201ENST00000315286 ITGB3BPQ13352 177 aaPredicted RBP20.3■□□□□ 0.84
CCDC43-201ENST00000315286 TSR1Q2NL82 804 aaKnown RBP20.3■□□□□ 0.84
CCDC43-201ENST00000315286 CCDC40Q4G0X9 1142 aa20.3■□□□□ 0.84
CCDC43-201ENST00000315286 BANK1Q8NDB2 785 aa20.3■□□□□ 0.84
CCDC43-201ENST00000315286 WDR24Q96S15 920 aa20.3■□□□□ 0.84
CCDC43-201ENST00000315286 LXNQ9BS40 222 aa20.3■□□□□ 0.84
CCDC43-201ENST00000315286 ADAMTS5Q9UNA0 930 aa20.3■□□□□ 0.84
CCDC43-201ENST00000315286 USP2O75604 605 aaPredicted RBP20.3■□□□□ 0.84
CCDC43-201ENST00000315286 MYCLP12524 364 aaPredicted RBP20.3■□□□□ 0.84
CCDC43-201ENST00000315286 ZBED6P86452 979 aa20.3■□□□□ 0.84
CCDC43-201ENST00000315286 ADAM9Q13443 819 aa20.3■□□□□ 0.84
CCDC43-201ENST00000315286 MTMR1Q13613 665 aa20.3■□□□□ 0.84
CCDC43-201ENST00000315286 COG2Q14746 738 aa20.3■□□□□ 0.84
CCDC43-201ENST00000315286 KNOP1Q1ED39 458 aaKnown RBP20.3■□□□□ 0.84
CCDC43-201ENST00000315286 NOL9Q5SY16 702 aaKnown RBP20.3■□□□□ 0.84
CCDC43-201ENST00000315286 ZC3H3Q8IXZ2 948 aaKnown RBP20.3■□□□□ 0.84
CCDC43-201ENST00000315286 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.3■□□□□ 0.84
CCDC43-201ENST00000315286 IRX2Q9BZI1 471 aaPredicted RBP20.3■□□□□ 0.84
CCDC43-201ENST00000315286 PXMP2Q9NR77 195 aa20.3■□□□□ 0.84
CCDC43-201ENST00000315286 AFG3L2Q9Y4W6 797 aa20.3■□□□□ 0.84
CCDC43-201ENST00000315286 BAATQ14032 418 aaPredicted RBP20.29■□□□□ 0.84
CCDC43-201ENST00000315286 EDRF1Q3B7T1 1238 aa20.29■□□□□ 0.84
CCDC43-201ENST00000315286 PPP4R3CPQ6ZMV5 832 aa20.29■□□□□ 0.84
CCDC43-201ENST00000315286 MIER3Q7Z3K6 550 aa20.29■□□□□ 0.84
CCDC43-201ENST00000315286 PDCD2LQ9BRP1 358 aa20.29■□□□□ 0.84
CCDC43-201ENST00000315286 ZNF215Q9UL58 517 aaPredicted RBP20.29■□□□□ 0.84
CCDC43-201ENST00000315286 ZNF214Q9UL59 606 aaPredicted RBP20.29■□□□□ 0.84
CCDC43-201ENST00000315286 EPN1Q9Y6I3 576 aaPredicted RBP20.29■□□□□ 0.84
CCDC43-201ENST00000315286 A0A1W2PQJ5 194 aa20.28■□□□□ 0.84
CCDC43-201ENST00000315286 GNA14O95837 355 aa20.28■□□□□ 0.84
CCDC43-201ENST00000315286 GAP43P17677 238 aa20.28■□□□□ 0.84
CCDC43-201ENST00000315286 MARSP56192 900 aaKnown RBP20.28■□□□□ 0.84
CCDC43-201ENST00000315286 MEA1Q16626 185 aa20.28■□□□□ 0.84
CCDC43-201ENST00000315286 SNRNP48Q6IEG0 339 aaKnown RBP20.28■□□□□ 0.84
CCDC43-201ENST00000315286 CATSPERGQ6ZRH7 1159 aa20.28■□□□□ 0.84
CCDC43-201ENST00000315286 ZNF710Q8N1W2 664 aa20.28■□□□□ 0.84
CCDC43-201ENST00000315286 CCDC155Q8N6L0 562 aa20.28■□□□□ 0.84
CCDC43-201ENST00000315286 OLFML3Q9NRN5 406 aa20.28■□□□□ 0.84
CCDC43-201ENST00000315286 TRAF3IP3Q9Y228 551 aa20.28■□□□□ 0.84
CCDC43-201ENST00000315286 SRCAPQ6ZRS2 3230 aa20.28■□□□□ 0.84
CCDC43-201ENST00000315286 EPHB6O15197 1021 aa20.28■□□□□ 0.84
CCDC43-201ENST00000315286 FAM13AO94988 1023 aa20.28■□□□□ 0.84
CCDC43-201ENST00000315286 GCNT3O95395 438 aa20.28■□□□□ 0.84
CCDC43-201ENST00000315286 NAA30Q147X3 362 aaPredicted RBP20.28■□□□□ 0.84
CCDC43-201ENST00000315286 TMEM132BQ14DG7 1078 aa20.28■□□□□ 0.84
CCDC43-201ENST00000315286 ARHGEF16Q5VV41 709 aa20.28■□□□□ 0.84
CCDC43-201ENST00000315286 MMRN2Q9H8L6 949 aa20.28■□□□□ 0.84
CCDC43-201ENST00000315286 FAM207AQ9NSI2 230 aaPredicted RBP20.28■□□□□ 0.84
CCDC43-201ENST00000315286 TMOD4Q9NZQ9 345 aa20.28■□□□□ 0.84
CCDC43-201ENST00000315286 CETN3O15182 167 aa20.27■□□□□ 0.84
CCDC43-201ENST00000315286 NDUFA10O95299 355 aa20.27■□□□□ 0.84
CCDC43-201ENST00000315286 NR2F2P24468 414 aa20.27■□□□□ 0.84
CCDC43-201ENST00000315286 OAZ1P54368 228 aa20.27■□□□□ 0.84
CCDC43-201ENST00000315286 BMT2Q1RMZ1 405 aa20.27■□□□□ 0.84
CCDC43-201ENST00000315286 TRIM59Q8IWR1 403 aa20.27■□□□□ 0.84
CCDC43-201ENST00000315286 MYCT1Q8N699 235 aa20.27■□□□□ 0.84
CCDC43-201ENST00000315286 NEK9Q8TD19 979 aa20.27■□□□□ 0.84
CCDC43-201ENST00000315286 SLU7O95391 586 aaKnown RBP20.26■□□□□ 0.83
CCDC43-201ENST00000315286 CASQ1P31415 396 aa20.26■□□□□ 0.83
CCDC43-201ENST00000315286 KCNA1Q09470 495 aa20.26■□□□□ 0.83
CCDC43-201ENST00000315286 KCNMA1Q12791 1236 aa20.26■□□□□ 0.83
CCDC43-201ENST00000315286 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.26■□□□□ 0.83
CCDC43-201ENST00000315286 ZNF397Q8NF99 534 aaPredicted RBP20.26■□□□□ 0.83
CCDC43-201ENST00000315286 SMCR8Q8TEV9 937 aaPredicted RBP20.26■□□□□ 0.83
CCDC43-201ENST00000315286 IQCDQ96DY2 449 aa20.26■□□□□ 0.83
CCDC43-201ENST00000315286 REXO2Q9Y3B8 237 aaKnown RBP20.26■□□□□ 0.83
CCDC43-201ENST00000315286 LOXHD1Q8IVV2 1947 aa20.26■□□□□ 0.83
CCDC43-201ENST00000315286 PDXKO00764 312 aa20.26■□□□□ 0.83
CCDC43-201ENST00000315286 ATP9AO75110 1047 aa20.26■□□□□ 0.83
CCDC43-201ENST00000315286 ABL1P00519 1130 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms