RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 NAV1Q8NEY1 1877 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 GOLGA6L10A6NI86 522 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 E9PMD0 336 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 GCOM1H8Y6P7 765 aaPredicted RBP14.72□□□□□ -0.05
SKA3-202ENST00000314759 CEP104O60308 925 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 MYZAPP0CAP1 466 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 RDXP35241 583 aaKnown RBP14.72□□□□□ -0.05
SKA3-202ENST00000314759 NOVP48745 357 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 KCNH2Q12809 1159 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 ADAM9Q13443 819 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 LRRC57Q8N9N7 239 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 CDCA7Q9BWT1 371 aaPredicted RBP14.72□□□□□ -0.05
SKA3-202ENST00000314759 NEUROG2Q9H2A3 272 aa14.72□□□□□ -0.05
SKA3-202ENST00000314759 BMP2KQ9NSY1 1161 aaPredicted RBP14.72□□□□□ -0.05
SKA3-202ENST00000314759 SRP68Q9UHB9 627 aaKnown RBP14.72□□□□□ -0.05
SKA3-202ENST00000314759 DDX25Q9UHL0 483 aaKnown RBP14.72□□□□□ -0.05
SKA3-202ENST00000314759 MYCNP04198 464 aaPredicted RBP14.71□□□□□ -0.05
SKA3-202ENST00000314759 LDHCP07864 332 aa14.71□□□□□ -0.05
SKA3-202ENST00000314759 CUL1Q13616 776 aa14.71□□□□□ -0.05
SKA3-202ENST00000314759 PREPLQ4J6C6 727 aaPredicted RBP14.71□□□□□ -0.05
SKA3-202ENST00000314759 DPY19L2P1Q6NXN4 242 aa14.71□□□□□ -0.05
SKA3-202ENST00000314759 ACTRT1Q8TDG2 376 aa14.71□□□□□ -0.05
SKA3-202ENST00000314759 CYFIP2Q96F07 1278 aa14.71□□□□□ -0.05
SKA3-202ENST00000314759 GPR101Q96P66 508 aaPredicted RBP14.71□□□□□ -0.05
SKA3-202ENST00000314759 UIMC1Q96RL1 719 aa14.71□□□□□ -0.05
SKA3-202ENST00000314759 DDX60LQ5H9U9 1706 aaKnown RBP14.71□□□□□ -0.05
SKA3-202ENST00000314759 SRRM3A6NNA2 597 aaPredicted RBP14.71□□□□□ -0.06
SKA3-202ENST00000314759 DNM1LO00429 736 aa14.71□□□□□ -0.06
SKA3-202ENST00000314759 SART1O43290 800 aaKnown RBP14.71□□□□□ -0.06
SKA3-202ENST00000314759 ZBTB48P10074 688 aaPredicted RBP14.71□□□□□ -0.06
SKA3-202ENST00000314759 ZNF844Q08AG5 666 aa14.71□□□□□ -0.06
SKA3-202ENST00000314759 QPCTQ16769 361 aa14.71□□□□□ -0.06
SKA3-202ENST00000314759 HERC4Q5GLZ8 1057 aaPredicted RBP14.71□□□□□ -0.06
SKA3-202ENST00000314759 FAM228AQ86W67 206 aa14.71□□□□□ -0.06
SKA3-202ENST00000314759 TEX11Q8IYF3 940 aa14.71□□□□□ -0.06
SKA3-202ENST00000314759 PBKQ96KB5 322 aa14.71□□□□□ -0.06
SKA3-202ENST00000314759 EMILIN3Q9NT22 766 aa14.71□□□□□ -0.06
SKA3-202ENST00000314759 PCDHA12Q9UN75 941 aa14.71□□□□□ -0.06
SKA3-202ENST00000314759 BHMG1C9JSJ3 638 aaPredicted RBP14.7□□□□□ -0.06
SKA3-202ENST00000314759 SLC9A1P19634 815 aa14.7□□□□□ -0.06
SKA3-202ENST00000314759 CTNNA1P35221 906 aaKnown RBP14.7□□□□□ -0.06
SKA3-202ENST00000314759 FLT3P36888 993 aa14.7□□□□□ -0.06
SKA3-202ENST00000314759 EPS15P42566 896 aa14.7□□□□□ -0.06
SKA3-202ENST00000314759 NEDD9Q14511 834 aa14.7□□□□□ -0.06
SKA3-202ENST00000314759 OSBPL7Q9BZF2 842 aa14.7□□□□□ -0.06
SKA3-202ENST00000314759 SLC12A6Q9UHW9 1150 aa14.7□□□□□ -0.06
SKA3-202ENST00000314759 GGA2Q9UJY4 613 aa14.7□□□□□ -0.06
SKA3-202ENST00000314759 KIAA1024Q9UPX6 916 aa14.7□□□□□ -0.06
SKA3-202ENST00000314759 SPATA31A1Q5TZJ5 1347 aa14.7□□□□□ -0.06
SKA3-202ENST00000314759 ELF1P32519 619 aa14.7□□□□□ -0.06
SKA3-202ENST00000314759 HYIQ5T013 277 aa14.7□□□□□ -0.06
SKA3-202ENST00000314759 CCDC65Q8IXS2 484 aa14.7□□□□□ -0.06
SKA3-202ENST00000314759 ZC3H3Q8IXZ2 948 aaKnown RBP14.7□□□□□ -0.06
SKA3-202ENST00000314759 ARFGAP2Q8N6H7 521 aa14.7□□□□□ -0.06
SKA3-202ENST00000314759 METTL13Q8N6R0 699 aa14.7□□□□□ -0.06
SKA3-202ENST00000314759 N4BP2L2Q92802 583 aaPredicted RBP14.7□□□□□ -0.06
SKA3-202ENST00000314759 CCDC114Q96M63 670 aa14.7□□□□□ -0.06
SKA3-202ENST00000314759 DDX47Q9H0S4 455 aaKnown RBP14.7□□□□□ -0.06
SKA3-202ENST00000314759 DDX20Q9UHI6 824 aaKnown RBP14.7□□□□□ -0.06
SKA3-202ENST00000314759 WNK3Q9BYP7 1800 aa14.7□□□□□ -0.06
SKA3-202ENST00000314759 C21orf2O43822 256 aa14.69□□□□□ -0.06
SKA3-202ENST00000314759 PPP1R11O60927 126 aaPredicted RBP14.69□□□□□ -0.06
SKA3-202ENST00000314759 ECM2O94769 699 aaPredicted RBP14.69□□□□□ -0.06
SKA3-202ENST00000314759 PLA2G4BP0C869 781 aa14.69□□□□□ -0.06
SKA3-202ENST00000314759 TMOD1P28289 359 aa14.69□□□□□ -0.06
SKA3-202ENST00000314759 C10orf76Q5T2E6 689 aa14.69□□□□□ -0.06
SKA3-202ENST00000314759 CEP57Q86XR8 500 aa14.69□□□□□ -0.06
SKA3-202ENST00000314759 LRRC47Q8N1G4 583 aaKnown RBP14.69□□□□□ -0.06
SKA3-202ENST00000314759 LRRC45Q96CN5 670 aa14.69□□□□□ -0.06
SKA3-202ENST00000314759 GPCPD1Q9NPB8 672 aa14.69□□□□□ -0.06
SKA3-202ENST00000314759 NAGPAQ9UK23 515 aa14.69□□□□□ -0.06
SKA3-202ENST00000314759 GPR75-ASB3A0A0A6YYF3 556 aa14.69□□□□□ -0.06
SKA3-202ENST00000314759 MARCH6O60337 910 aa14.69□□□□□ -0.06
SKA3-202ENST00000314759 UCHL3P15374 230 aa14.69□□□□□ -0.06
SKA3-202ENST00000314759 CLK2P49760 499 aaKnown RBP14.69□□□□□ -0.06
SKA3-202ENST00000314759 NFIXQ14938 502 aa14.69□□□□□ -0.06
SKA3-202ENST00000314759 TPTE2Q6XPS3 522 aa14.69□□□□□ -0.06
SKA3-202ENST00000314759 GPBP1Q86WP2 473 aa14.69□□□□□ -0.06
SKA3-202ENST00000314759 FBXL5Q9UKA1 691 aa14.69□□□□□ -0.06
SKA3-202ENST00000314759 NOC2LQ9Y3T9 749 aaKnown RBP14.69□□□□□ -0.06
SKA3-202ENST00000314759 MYH4Q9Y623 1939 aa14.69□□□□□ -0.06
SKA3-202ENST00000314759 GMNCA6NCL1 334 aa14.69□□□□□ -0.06
SKA3-202ENST00000314759 PGRMC1O00264 195 aaKnown RBP14.69□□□□□ -0.06
SKA3-202ENST00000314759 ITGA4P13612 1032 aa14.69□□□□□ -0.06
SKA3-202ENST00000314759 ALKBH5Q6P6C2 394 aaKnown RBP14.69□□□□□ -0.06
SKA3-202ENST00000314759 RPAINQ86UA6 219 aa14.69□□□□□ -0.06
SKA3-202ENST00000314759 RBM46Q8TBY0 533 aaKnown RBP14.69□□□□□ -0.06
SKA3-202ENST00000314759 CALR3Q96L12 384 aaKnown RBP14.69□□□□□ -0.06
SKA3-202ENST00000314759 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.69□□□□□ -0.066e-14■■■■□ 20.1
SKA3-202ENST00000314759 NT5C3AQ9H0P0 336 aa14.69□□□□□ -0.06
SKA3-202ENST00000314759 HAUS2Q9NVX0 235 aa14.69□□□□□ -0.06
SKA3-202ENST00000314759 MTMR4Q9NYA4 1195 aa14.69□□□□□ -0.06
SKA3-202ENST00000314759 HDAC9Q9UKV0 1011 aa14.69□□□□□ -0.06
SKA3-202ENST00000314759 ODF2LQ9ULJ1 636 aa14.69□□□□□ -0.06
SKA3-202ENST00000314759 COL5A3P25940 1745 aaPredicted RBP14.69□□□□□ -0.06
SKA3-202ENST00000314759 POTEB3A0JP26 581 aa14.68□□□□□ -0.06
SKA3-202ENST00000314759 POTECB2RU33 542 aa14.68□□□□□ -0.06
SKA3-202ENST00000314759 CETN3O15182 167 aa14.68□□□□□ -0.06
SKA3-202ENST00000314759 TRAPPC3O43617 180 aa14.68□□□□□ -0.06
SKA3-202ENST00000314759 ATP2C2O75185 946 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms