RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 PLS1Q14651 629 aa13.72□□□□□ -0.21
RNF4-201ENST00000314289 MAN2A1Q16706 1144 aa13.72□□□□□ -0.21
RNF4-201ENST00000314289 FAM160B2Q86V87 743 aa13.72□□□□□ -0.21
RNF4-201ENST00000314289 UNC45AQ9H3U1 944 aa13.72□□□□□ -0.21
RNF4-201ENST00000314289 ZCCHC17Q9NP64 241 aaKnown RBP13.72□□□□□ -0.21
RNF4-201ENST00000314289 PUF60Q9UHX1 559 aaKnown RBP13.72□□□□□ -0.21
RNF4-201ENST00000314289 ENC1O14682 589 aa13.72□□□□□ -0.21
RNF4-201ENST00000314289 PSMD10O75832 226 aa13.72□□□□□ -0.21
RNF4-201ENST00000314289 ZC2HC1CQ53FD0 456 aaPredicted RBP13.72□□□□□ -0.21
RNF4-201ENST00000314289 COBLL1Q53SF7 1204 aa13.72□□□□□ -0.21
RNF4-201ENST00000314289 TEX35Q5T0J7 233 aa13.72□□□□□ -0.21
RNF4-201ENST00000314289 RRAGAQ7L523 313 aa13.72□□□□□ -0.21
RNF4-201ENST00000314289 PRPF38AQ8NAV1 312 aaKnown RBP13.72□□□□□ -0.21
RNF4-201ENST00000314289 TRPM4Q8TD43 1214 aa13.72□□□□□ -0.21
RNF4-201ENST00000314289 VPS33BQ9H267 617 aa13.72□□□□□ -0.21
RNF4-201ENST00000314289 NHEJ1Q9H9Q4 299 aaPredicted RBP13.72□□□□□ -0.21
RNF4-201ENST00000314289 COL4A3BPQ9Y5P4 624 aa13.72□□□□□ -0.21
RNF4-201ENST00000314289 RCCD1A6NED2 376 aa13.72□□□□□ -0.21
RNF4-201ENST00000314289 IPO5O00410 1097 aaKnown RBP13.72□□□□□ -0.21
RNF4-201ENST00000314289 GCNT3O95395 438 aa13.72□□□□□ -0.21
RNF4-201ENST00000314289 MYCLP12524 364 aaPredicted RBP13.72□□□□□ -0.21
RNF4-201ENST00000314289 NMT1P30419 496 aaKnown RBP13.72□□□□□ -0.21
RNF4-201ENST00000314289 HOXD13P35453 343 aa13.72□□□□□ -0.21
RNF4-201ENST00000314289 ZNF280AP59817 542 aaPredicted RBP13.72□□□□□ -0.21
RNF4-201ENST00000314289 TNFAIP1Q13829 316 aa13.72□□□□□ -0.21
RNF4-201ENST00000314289 NSMFQ6X4W1 530 aa13.72□□□□□ -0.21
RNF4-201ENST00000314289 WRNIP1Q96S55 665 aa13.72□□□□□ -0.21
RNF4-201ENST00000314289 HSD17B14Q9BPX1 270 aa13.72□□□□□ -0.21
RNF4-201ENST00000314289 KCTD10Q9H3F6 313 aa13.72□□□□□ -0.21
RNF4-201ENST00000314289 RPAP3Q9H6T3 665 aaPredicted RBP13.72□□□□□ -0.21
RNF4-201ENST00000314289 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.72□□□□□ -0.21
RNF4-201ENST00000314289 SIK3Q9Y2K2 1263 aa13.72□□□□□ -0.21
RNF4-201ENST00000314289 FAM170AA1A519 330 aa13.71□□□□□ -0.21
RNF4-201ENST00000314289 TMEM150BA6NC51 233 aa13.71□□□□□ -0.21
RNF4-201ENST00000314289 SORBS3O60504 671 aa13.71□□□□□ -0.21
RNF4-201ENST00000314289 PEX10O60683 326 aa13.71□□□□□ -0.21
RNF4-201ENST00000314289 TADA3O75528 432 aa13.71□□□□□ -0.21
RNF4-201ENST00000314289 ZRANB2O95218 330 aaKnown RBP eCLIP13.71□□□□□ -0.21
RNF4-201ENST00000314289 ICAM1P05362 532 aa13.71□□□□□ -0.21
RNF4-201ENST00000314289 FECHP22830 423 aa13.71□□□□□ -0.21
RNF4-201ENST00000314289 NR2F2P24468 414 aa13.71□□□□□ -0.21
RNF4-201ENST00000314289 HERVK_113P62684 666 aa13.71□□□□□ -0.21
RNF4-201ENST00000314289 ARID5AQ03989 594 aa13.71□□□□□ -0.21
RNF4-201ENST00000314289 RINT1Q6NUQ1 792 aa13.71□□□□□ -0.21
RNF4-201ENST00000314289 CLEC4DQ8WXI8 215 aa13.71□□□□□ -0.21
RNF4-201ENST00000314289 ERGIC2Q96RQ1 377 aa13.71□□□□□ -0.21
RNF4-201ENST00000314289 SYNPO2Q9UMS6 1093 aa13.71□□□□□ -0.21
RNF4-201ENST00000314289 SAMM50Q9Y512 469 aa13.71□□□□□ -0.21
RNF4-201ENST00000314289 RIPK3Q9Y572 518 aa13.71□□□□□ -0.21
RNF4-201ENST00000314289 TAAR1Q96RJ0 339 aa13.71□□□□□ -0.22
RNF4-201ENST00000314289 LACRTQ9GZZ8 138 aa13.71□□□□□ -0.22
RNF4-201ENST00000314289 ZNHIT6Q9NWK9 470 aaKnown RBP13.71□□□□□ -0.22
RNF4-201ENST00000314289 FER1L6Q2WGJ9 1857 aa13.71□□□□□ -0.22
RNF4-201ENST00000314289 LRRC53A6NM62 1247 aa13.7□□□□□ -0.22
RNF4-201ENST00000314289 TBCAO75347 108 aaKnown RBP13.7□□□□□ -0.22
RNF4-201ENST00000314289 HMGCS2P54868 508 aa13.7□□□□□ -0.22
RNF4-201ENST00000314289 ZBED6P86452 979 aa13.7□□□□□ -0.22
RNF4-201ENST00000314289 MAP3K10Q02779 954 aa13.7□□□□□ -0.22
RNF4-201ENST00000314289 KCNMA1Q12791 1236 aa13.7□□□□□ -0.22
RNF4-201ENST00000314289 MCTP2Q6DN12 878 aa13.7□□□□□ -0.22
RNF4-201ENST00000314289 MYCT1Q8N699 235 aa13.7□□□□□ -0.22
RNF4-201ENST00000314289 ATG4CQ96DT6 458 aa13.7□□□□□ -0.22
RNF4-201ENST00000314289 KCNH7Q9NS40 1196 aa13.7□□□□□ -0.22
RNF4-201ENST00000314289 CTDP1Q9Y5B0 961 aaPredicted RBP13.7□□□□□ -0.22
RNF4-201ENST00000314289 CAPN2P17655 700 aa13.7□□□□□ -0.22
RNF4-201ENST00000314289 OAS2P29728 719 aaKnown RBP13.7□□□□□ -0.22
RNF4-201ENST00000314289 CASP4P49662 377 aa13.7□□□□□ -0.22
RNF4-201ENST00000314289 RPS6P62753 249 aaKnown RBP13.7□□□□□ -0.22
RNF4-201ENST00000314289 MAP3K9P80192 1104 aa13.7□□□□□ -0.22
RNF4-201ENST00000314289 PPP2R3AQ06190 1150 aa13.7□□□□□ -0.22
RNF4-201ENST00000314289 KIAA1328Q86T90 577 aa13.7□□□□□ -0.22
RNF4-201ENST00000314289 SLC5A5Q92911 643 aa13.7□□□□□ -0.22
RNF4-201ENST00000314289 HDAC6Q9UBN7 1215 aa13.7□□□□□ -0.22
RNF4-201ENST00000314289 MRFAP1Q9Y605 127 aa13.7□□□□□ -0.22
RNF4-201ENST00000314289 ZHX2Q9Y6X8 837 aa13.7□□□□□ -0.22
RNF4-201ENST00000314289 MACROD2A1Z1Q3 448 aa13.7□□□□□ -0.22
RNF4-201ENST00000314289 SASH3O75995 380 aa13.7□□□□□ -0.22
RNF4-201ENST00000314289 FGFR1OPO95684 399 aaKnown RBP13.7□□□□□ -0.22
RNF4-201ENST00000314289 CCDC122Q5T0U0 273 aa13.7□□□□□ -0.22
RNF4-201ENST00000314289 CACNA2D4Q7Z3S7 1137 aa13.7□□□□□ -0.22
RNF4-201ENST00000314289 LXNQ9BS40 222 aa13.7□□□□□ -0.22
RNF4-201ENST00000314289 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.7□□□□□ -0.22
RNF4-201ENST00000314289 ZNF263O14978 683 aa13.69□□□□□ -0.22
RNF4-201ENST00000314289 EYA4O95677 639 aa13.69□□□□□ -0.22
RNF4-201ENST00000314289 GYS2P54840 703 aa13.69□□□□□ -0.22
RNF4-201ENST00000314289 COG2Q14746 738 aa13.69□□□□□ -0.22
RNF4-201ENST00000314289 DCAF17Q5H9S7 520 aaPredicted RBP13.69□□□□□ -0.22
RNF4-201ENST00000314289 ARHGAP20Q9P2F6 1191 aa13.69□□□□□ -0.22
RNF4-201ENST00000314289 ATAD5Q96QE3 1844 aa13.69□□□□□ -0.22
RNF4-201ENST00000314289 KIF13BQ9NQT8 1826 aa13.69□□□□□ -0.22
RNF4-201ENST00000314289 FRMD3A2A2Y4 597 aa13.69□□□□□ -0.22
RNF4-201ENST00000314289 WDR46O15213 610 aaKnown RBP13.69□□□□□ -0.22
RNF4-201ENST00000314289 CTNND1O60716 968 aaKnown RBP13.69□□□□□ -0.22
RNF4-201ENST00000314289 TUBB4AP04350 444 aa13.69□□□□□ -0.22
RNF4-201ENST00000314289 ACTN1P12814 892 aa13.69□□□□□ -0.22
RNF4-201ENST00000314289 EPS15P42566 896 aa13.69□□□□□ -0.22
RNF4-201ENST00000314289 MRPS9P82933 396 aaKnown RBP13.69□□□□□ -0.22
RNF4-201ENST00000314289 TCERG1LQ5VWI1 586 aa13.69□□□□□ -0.22
RNF4-201ENST00000314289 ANKRD13CQ8N6S4 541 aa13.69□□□□□ -0.22
RNF4-201ENST00000314289 MXRA8Q9BRK3 442 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms