RNA–Protein interactions for RNA: ENST00000310260.7

VANGL1-201, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-201ENST00000310260 PHF20Q9BVI0 1012 aa14.08□□□□□ -0.15
VANGL1-201ENST00000310260 ZMYND12Q9H0C1 365 aa14.08□□□□□ -0.15
VANGL1-201ENST00000310260 GBP3Q9H0R5 595 aa14.08□□□□□ -0.15
VANGL1-201ENST00000310260 COL20A1Q9P218 1284 aa14.08□□□□□ -0.15
VANGL1-201ENST00000310260 GABRQQ9UN88 632 aa14.08□□□□□ -0.15
VANGL1-201ENST00000310260 ADGRG1Q9Y653 693 aa14.08□□□□□ -0.15
VANGL1-201ENST00000310260 A0A087WUV0 522 aaPredicted RBP14.08□□□□□ -0.16
VANGL1-201ENST00000310260 BTBD18B2RXH4 712 aa14.08□□□□□ -0.16
VANGL1-201ENST00000310260 hCG_1984214I3L0E3 225 aa14.08□□□□□ -0.16
VANGL1-201ENST00000310260 MEIS2O14770 477 aa14.08□□□□□ -0.16
VANGL1-201ENST00000310260 COBLO75128 1261 aa14.08□□□□□ -0.16
VANGL1-201ENST00000310260 GSCP56915 257 aaPredicted RBP14.08□□□□□ -0.16
VANGL1-201ENST00000310260 TUBB2AQ13885 445 aa14.08□□□□□ -0.16
VANGL1-201ENST00000310260 SLC39A14Q15043 492 aa14.08□□□□□ -0.16
VANGL1-201ENST00000310260 SAFBQ15424 915 aaKnown RBP eCLIP14.08□□□□□ -0.16
VANGL1-201ENST00000310260 DNAJC21Q5F1R6 531 aaKnown RBP14.08□□□□□ -0.16
VANGL1-201ENST00000310260 RAD9BQ6WBX8 426 aa14.08□□□□□ -0.16
VANGL1-201ENST00000310260 CCDC91Q7Z6B0 441 aa14.08□□□□□ -0.16
VANGL1-201ENST00000310260 BLIDQ8IZY5 108 aa14.08□□□□□ -0.16
VANGL1-201ENST00000310260 ZNF713Q8N859 430 aaPredicted RBP14.08□□□□□ -0.16
VANGL1-201ENST00000310260 KAT2BQ92831 832 aa14.08□□□□□ -0.16
VANGL1-201ENST00000310260 TAAR1Q96RJ0 339 aa14.08□□□□□ -0.16
VANGL1-201ENST00000310260 CEP89Q96ST8 783 aa14.08□□□□□ -0.16
VANGL1-201ENST00000310260 TUBB2BQ9BVA1 445 aa14.08□□□□□ -0.16
VANGL1-201ENST00000310260 ACBD3Q9H3P7 528 aa14.08□□□□□ -0.16
VANGL1-201ENST00000310260 STRNO43815 780 aa14.07□□□□□ -0.16
VANGL1-201ENST00000310260 KIF5CO60282 957 aa14.07□□□□□ -0.16
VANGL1-201ENST00000310260 EIF2AK2P19525 551 aaKnown RBP14.07□□□□□ -0.16
VANGL1-201ENST00000310260 PRKCZQ05513 592 aa14.07□□□□□ -0.16
VANGL1-201ENST00000310260 DIS3L2Q8IYB7 885 aaKnown RBP14.07□□□□□ -0.16
VANGL1-201ENST00000310260 REXO1Q8N1G1 1221 aaKnown RBP14.07□□□□□ -0.16
VANGL1-201ENST00000310260 SYTL5Q8TDW5 730 aaPredicted RBP14.07□□□□□ -0.16
VANGL1-201ENST00000310260 AFAP1L1Q8TED9 768 aa14.07□□□□□ -0.16
VANGL1-201ENST00000310260 NUDT12Q9BQG2 462 aa14.07□□□□□ -0.16
VANGL1-201ENST00000310260 PCDHA4Q9UN74 947 aa14.07□□□□□ -0.16
VANGL1-201ENST00000310260 TRIM17Q9Y577 477 aa14.07□□□□□ -0.16
VANGL1-201ENST00000310260 DOCK3Q8IZD9 2030 aa14.07□□□□□ -0.16
VANGL1-201ENST00000310260 SPDYE3A6NKU9 549 aa14.07□□□□□ -0.16
VANGL1-201ENST00000310260 SYF2O95926 243 aaKnown RBP14.07□□□□□ -0.16
VANGL1-201ENST00000310260 MMP1P03956 469 aa14.07□□□□□ -0.16
VANGL1-201ENST00000310260 KRT2P35908 639 aa14.07□□□□□ -0.16
VANGL1-201ENST00000310260 FLT3LGP49771 235 aa14.07□□□□□ -0.16
VANGL1-201ENST00000310260 CT47A1Q5JQC4 288 aaPredicted RBP14.07□□□□□ -0.16
VANGL1-201ENST00000310260 PPP1R18Q6NYC8 613 aa14.07□□□□□ -0.16
VANGL1-201ENST00000310260 PANX2Q96RD6 677 aa14.07□□□□□ -0.16
VANGL1-201ENST00000310260 RMDN3Q96TC7 470 aa14.07□□□□□ -0.16
VANGL1-201ENST00000310260 VIPAS39Q9H9C1 493 aa14.07□□□□□ -0.16
VANGL1-201ENST00000310260 PFASO15067 1338 aa14.06□□□□□ -0.16
VANGL1-201ENST00000310260 THSD7BQ9C0I4 1608 aa14.06□□□□□ -0.16
VANGL1-201ENST00000310260 SLC15A5A6NIM6 579 aa14.06□□□□□ -0.16
VANGL1-201ENST00000310260 HSPA8P11142 646 aaKnown RBP14.06□□□□□ -0.16
VANGL1-201ENST00000310260 CTCFP49711 727 aaPredicted RBP14.06□□□□□ -0.16
VANGL1-201ENST00000310260 ARHGEF16Q5VV41 709 aa14.06□□□□□ -0.16
VANGL1-201ENST00000310260 NFE2L3Q9Y4A8 694 aa14.06□□□□□ -0.16
VANGL1-201ENST00000310260 PCDHA5Q9Y5H7 936 aa14.06□□□□□ -0.16
VANGL1-201ENST00000310260 CTAGE9A4FU28 777 aa14.06□□□□□ -0.16
VANGL1-201ENST00000310260 MYCLP12524 364 aaPredicted RBP14.06□□□□□ -0.16
VANGL1-201ENST00000310260 HSD17B4P51659 736 aa14.06□□□□□ -0.16
VANGL1-201ENST00000310260 GRB14Q14449 540 aa14.06□□□□□ -0.16
VANGL1-201ENST00000310260 NPY5RQ15761 445 aa14.06□□□□□ -0.16
VANGL1-201ENST00000310260 ZNF569Q5MCW4 686 aa14.06□□□□□ -0.16
VANGL1-201ENST00000310260 RESP18Q5W5W9 173 aa14.06□□□□□ -0.16
VANGL1-201ENST00000310260 WDR93Q6P2C0 686 aa14.06□□□□□ -0.16
VANGL1-201ENST00000310260 PIK3AP1Q6ZUJ8 805 aa14.06□□□□□ -0.16
VANGL1-201ENST00000310260 EEPD1Q7L9B9 569 aa14.06□□□□□ -0.16
VANGL1-201ENST00000310260 NOA1Q8NC60 698 aaKnown RBP14.06□□□□□ -0.16
VANGL1-201ENST00000310260 PCDHA6Q9UN73 950 aa14.06□□□□□ -0.16
VANGL1-201ENST00000310260 PCDHA8Q9Y5H6 950 aa14.06□□□□□ -0.16
VANGL1-201ENST00000310260 CASP8AP2Q9UKL3 1982 aa14.05□□□□□ -0.16
VANGL1-201ENST00000310260 A0A0G2JMZ2 1700 aa14.05□□□□□ -0.16
VANGL1-201ENST00000310260 CTAGE15A4D2H0 777 aa14.05□□□□□ -0.16
VANGL1-201ENST00000310260 FAM205CA6NFA0 338 aa14.05□□□□□ -0.16
VANGL1-201ENST00000310260 SHOX2O60902 331 aaPredicted RBP14.05□□□□□ -0.16
VANGL1-201ENST00000310260 PPP6R2O75170 966 aa14.05□□□□□ -0.16
VANGL1-201ENST00000310260 TUBBP07437 444 aa14.05□□□□□ -0.16
VANGL1-201ENST00000310260 CTAGE8P0CG41 777 aa14.05□□□□□ -0.16
VANGL1-201ENST00000310260 MAP2K5Q13163 448 aa14.05□□□□□ -0.16
VANGL1-201ENST00000310260 PTPAQ15257 358 aa14.05□□□□□ -0.16
VANGL1-201ENST00000310260 CCL14Q16627 93 aa14.05□□□□□ -0.16
VANGL1-201ENST00000310260 WHAMMP3Q1A5X7 153 aa14.05□□□□□ -0.16
VANGL1-201ENST00000310260 MORN1Q5T089 497 aa14.05□□□□□ -0.16
VANGL1-201ENST00000310260 CTAGE6Q86UF2 777 aa14.05□□□□□ -0.16
VANGL1-201ENST00000310260 CTAGE4Q8IX94 777 aa14.05□□□□□ -0.16
VANGL1-201ENST00000310260 MICALL1Q8N3F8 863 aa14.05□□□□□ -0.16
VANGL1-201ENST00000310260 NPLOC4Q8TAT6 608 aa14.05□□□□□ -0.16
VANGL1-201ENST00000310260 CLIC6Q96NY7 704 aa14.05□□□□□ -0.16
VANGL1-201ENST00000310260 UIMC1Q96RL1 719 aa14.05□□□□□ -0.16
VANGL1-201ENST00000310260 RNF216Q9NWF9 866 aaPredicted RBP14.05□□□□□ -0.16
VANGL1-201ENST00000310260 GJD2Q9UKL4 321 aa14.05□□□□□ -0.16
VANGL1-201ENST00000310260 CCDC194A0A1B0GVG4 234 aa14.04□□□□□ -0.16
VANGL1-201ENST00000310260 ESYT2A0FGR8 921 aa14.04□□□□□ -0.16
VANGL1-201ENST00000310260 SOWAHBA6NEL2 793 aa14.04□□□□□ -0.16
VANGL1-201ENST00000310260 AKR1B15C9JRZ8 316 aaPredicted RBP14.04□□□□□ -0.16
VANGL1-201ENST00000310260 HOXD10P28358 340 aa14.04□□□□□ -0.16
VANGL1-201ENST00000310260 LONRF3Q496Y0 759 aa14.04□□□□□ -0.16
VANGL1-201ENST00000310260 SLC35F6Q8N357 371 aa14.04□□□□□ -0.16
VANGL1-201ENST00000310260 RAET1EQ8TD07 263 aa14.04□□□□□ -0.16
VANGL1-201ENST00000310260 FAM107BQ9H098 131 aa14.04□□□□□ -0.16
VANGL1-201ENST00000310260 CXorf56Q9H5V9 222 aa14.04□□□□□ -0.16
VANGL1-201ENST00000310260 ZSWIM8A7E2V4 1837 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms