RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 EHMT1Q9H9B1 1298 aa9.29□□□□□ -0.92
CHD6-201ENST00000309279 CAPN10Q9HC96 672 aa9.29□□□□□ -0.92
CHD6-201ENST00000309279 HMX1Q9NP08 348 aaPredicted RBP9.29□□□□□ -0.92
CHD6-201ENST00000309279 PAK6Q9NQU5 681 aaPredicted RBP9.29□□□□□ -0.92
CHD6-201ENST00000309279 TYW1Q9NV66 732 aaKnown RBP9.29□□□□□ -0.92
CHD6-201ENST00000309279 POLR3EQ9NVU0 708 aa9.29□□□□□ -0.92
CHD6-201ENST00000309279 DNAH12Q6ZR08 3092 aa9.28□□□□□ -0.92
CHD6-201ENST00000309279 DYTNA2CJ06 578 aa9.28□□□□□ -0.92
CHD6-201ENST00000309279 CYP3A4P08684 503 aa9.28□□□□□ -0.92
CHD6-201ENST00000309279 NAT1P18440 290 aa9.28□□□□□ -0.92
CHD6-201ENST00000309279 CCND2P30279 289 aa9.28□□□□□ -0.92
CHD6-201ENST00000309279 CCND3P30281 292 aaPredicted RBP9.28□□□□□ -0.92
CHD6-201ENST00000309279 SATB1Q01826 763 aa9.28□□□□□ -0.92
CHD6-201ENST00000309279 ANKRD13BQ86YJ7 626 aa9.28□□□□□ -0.92
CHD6-201ENST00000309279 RAVER1Q8IY67 606 aaKnown RBP9.28□□□□□ -0.92
CHD6-201ENST00000309279 RASGRP4Q8TDF6 673 aa9.28□□□□□ -0.92
CHD6-201ENST00000309279 CCDC47Q96A33 483 aaKnown RBP9.28□□□□□ -0.92
CHD6-201ENST00000309279 UNC93B1Q9H1C4 597 aa9.28□□□□□ -0.92
CHD6-201ENST00000309279 ODF2LQ9ULJ1 636 aa9.28□□□□□ -0.92
CHD6-201ENST00000309279 BTBD18B2RXH4 712 aa9.27□□□□□ -0.92
CHD6-201ENST00000309279 EDIL3O43854 480 aa9.27□□□□□ -0.92
CHD6-201ENST00000309279 MSCO60682 206 aa9.27□□□□□ -0.92
CHD6-201ENST00000309279 MYCLP12524 364 aaPredicted RBP9.27□□□□□ -0.92
CHD6-201ENST00000309279 CCL5P13501 91 aa9.27□□□□□ -0.92
CHD6-201ENST00000309279 AKR1A1P14550 325 aa9.27□□□□□ -0.92
CHD6-201ENST00000309279 CIITAP33076 1130 aa9.27□□□□□ -0.92
CHD6-201ENST00000309279 KRT2P35908 639 aa9.27□□□□□ -0.92
CHD6-201ENST00000309279 SERPINB4P48594 390 aa9.27□□□□□ -0.92
CHD6-201ENST00000309279 CLK1P49759 484 aaKnown RBP9.27□□□□□ -0.92
CHD6-201ENST00000309279 USP11P51784 963 aa9.27□□□□□ -0.92
CHD6-201ENST00000309279 ARHGAP4P98171 946 aa9.27□□□□□ -0.92
CHD6-201ENST00000309279 LHX8Q68G74 356 aa9.27□□□□□ -0.92
CHD6-201ENST00000309279 IQSEC1Q6DN90 963 aa9.27□□□□□ -0.92
CHD6-201ENST00000309279 EEPD1Q7L9B9 569 aa9.27□□□□□ -0.92
CHD6-201ENST00000309279 KRT25Q7Z3Z0 450 aa9.27□□□□□ -0.92
CHD6-201ENST00000309279 FBXO16Q8IX29 292 aaPredicted RBP9.27□□□□□ -0.92
CHD6-201ENST00000309279 DIS3L2Q8IYB7 885 aaKnown RBP9.27□□□□□ -0.92
CHD6-201ENST00000309279 RELTQ969Z4 430 aa9.27□□□□□ -0.92
CHD6-201ENST00000309279 PGBD1Q96JS3 809 aa9.27□□□□□ -0.92
CHD6-201ENST00000309279 INPP4AQ96PE3 977 aaPredicted RBP9.27□□□□□ -0.92
CHD6-201ENST00000309279 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.27□□□□□ -0.929e-10■■■□□ 17.1
CHD6-201ENST00000309279 RNF208Q9H0X6 261 aa9.27□□□□□ -0.92
CHD6-201ENST00000309279 FOXP1Q9H334 677 aaPredicted RBP9.27□□□□□ -0.92
CHD6-201ENST00000309279 BRMS1Q9HCU9 246 aa9.27□□□□□ -0.92
CHD6-201ENST00000309279 PDGFCQ9NRA1 345 aa9.27□□□□□ -0.92
CHD6-201ENST00000309279 ENPP3O14638 875 aa9.27□□□□□ -0.93
CHD6-201ENST00000309279 RNASEH2AO75792 299 aaKnown RBP9.27□□□□□ -0.93
CHD6-201ENST00000309279 GJB1P08034 283 aa9.27□□□□□ -0.93
CHD6-201ENST00000309279 CAPN2P17655 700 aa9.27□□□□□ -0.93
CHD6-201ENST00000309279 ITGB5P18084 799 aa9.27□□□□□ -0.93
CHD6-201ENST00000309279 PDCP20941 246 aa9.27□□□□□ -0.93
CHD6-201ENST00000309279 U2AF2P26368 475 aaKnown RBP eCLIP9.27□□□□□ -0.935e-7■■□□□ 12.7
CHD6-201ENST00000309279 ICAM3P32942 547 aa9.27□□□□□ -0.93
CHD6-201ENST00000309279 NUBP1P53384 320 aa9.27□□□□□ -0.93
CHD6-201ENST00000309279 NR5A1Q13285 461 aa9.27□□□□□ -0.93
CHD6-201ENST00000309279 BECN1Q14457 450 aa9.27□□□□□ -0.93
CHD6-201ENST00000309279 SAFBQ15424 915 aaKnown RBP eCLIP9.27□□□□□ -0.933e-6■□□□□ 11
CHD6-201ENST00000309279 DUSP28Q4G0W2 176 aa9.27□□□□□ -0.93
CHD6-201ENST00000309279 ZC3H12AQ5D1E8 599 aaKnown RBP9.27□□□□□ -0.93
CHD6-201ENST00000309279 EARS2Q5JPH6 523 aaKnown RBP9.27□□□□□ -0.93
CHD6-201ENST00000309279 CCDC62Q6P9F0 684 aa9.27□□□□□ -0.93
CHD6-201ENST00000309279 KCNV1Q6PIU1 500 aa9.27□□□□□ -0.93
CHD6-201ENST00000309279 TNS4Q8IZW8 715 aa9.27□□□□□ -0.93
CHD6-201ENST00000309279 CCDC89Q8N998 374 aa9.27□□□□□ -0.93
CHD6-201ENST00000309279 TBCKQ8TEA7 893 aa9.27□□□□□ -0.93
CHD6-201ENST00000309279 SCFD2Q8WU76 684 aa9.27□□□□□ -0.93
CHD6-201ENST00000309279 ITFG2Q969R8 447 aa9.27□□□□□ -0.93
CHD6-201ENST00000309279 ABHD8Q96I13 439 aa9.27□□□□□ -0.93
CHD6-201ENST00000309279 WDR11Q9BZH6 1224 aa9.27□□□□□ -0.93
CHD6-201ENST00000309279 DDX20Q9UHI6 824 aaKnown RBP9.27□□□□□ -0.93
CHD6-201ENST00000309279 ZHX1Q9UKY1 873 aaPredicted RBP9.27□□□□□ -0.93
CHD6-201ENST00000309279 FAM184BQ9ULE4 1060 aa9.27□□□□□ -0.93
CHD6-201ENST00000309279 UBIAD1Q9Y5Z9 338 aa9.27□□□□□ -0.93
CHD6-201ENST00000309279 FRMPD3Q5JV73 1810 aa9.26□□□□□ -0.93
CHD6-201ENST00000309279 CYP3A7-CYP3A51PA0A087WV96 503 aa9.26□□□□□ -0.93
CHD6-201ENST00000309279 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.26□□□□□ -0.93
CHD6-201ENST00000309279 SPATA31C2B4DYI2 1134 aa9.26□□□□□ -0.93
CHD6-201ENST00000309279 MEIS1O00470 390 aa9.26□□□□□ -0.93
CHD6-201ENST00000309279 TNFRSF10BO14763 440 aa9.26□□□□□ -0.93
CHD6-201ENST00000309279 ADCY6O43306 1168 aa9.26□□□□□ -0.93
CHD6-201ENST00000309279 DUSP11O75319 330 aaKnown RBP9.26□□□□□ -0.93
CHD6-201ENST00000309279 PPP1R37O75864 691 aa9.26□□□□□ -0.93
CHD6-201ENST00000309279 SGPL1O95470 568 aa9.26□□□□□ -0.93
CHD6-201ENST00000309279 RBP3P10745 1247 aa9.26□□□□□ -0.93
CHD6-201ENST00000309279 CYP3A7P24462 503 aa9.26□□□□□ -0.93
CHD6-201ENST00000309279 CNGA1P29973 690 aa9.26□□□□□ -0.93
CHD6-201ENST00000309279 ADCYAP1R1P41586 468 aa9.26□□□□□ -0.93
CHD6-201ENST00000309279 GJA8P48165 433 aa9.26□□□□□ -0.93
CHD6-201ENST00000309279 NKX3-2P78367 333 aa9.26□□□□□ -0.93
CHD6-201ENST00000309279 GUCY1B3Q02153 619 aa9.26□□□□□ -0.93
CHD6-201ENST00000309279 RAPGEF1Q13905 1077 aa9.26□□□□□ -0.93
CHD6-201ENST00000309279 TTLL4Q14679 1199 aa9.26□□□□□ -0.93
CHD6-201ENST00000309279 NONOQ15233 471 aaKnown RBP eCLIP9.26□□□□□ -0.93
CHD6-201ENST00000309279 GNPTABQ3T906 1256 aa9.26□□□□□ -0.93
CHD6-201ENST00000309279 CEP55Q53EZ4 464 aa9.26□□□□□ -0.93
CHD6-201ENST00000309279 NIPA1Q7RTP0 329 aa9.26□□□□□ -0.93
CHD6-201ENST00000309279 KIAA1958Q8N8K9 716 aa9.26□□□□□ -0.93
CHD6-201ENST00000309279 CYP2W1Q8TAV3 490 aa9.26□□□□□ -0.93
CHD6-201ENST00000309279 RNF217Q8TC41 542 aa9.26□□□□□ -0.93
CHD6-201ENST00000309279 FRMD6Q96NE9 622 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms