RNA–Protein interactions for RNA: ENST00000308177.4

PCDHGC3-201, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC3, Length 4,725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-201ENST00000308177 CROCCP2Q86T23 111 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 COL23A1Q86Y22 540 aaPredicted RBP12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 IPO4Q8TEX9 1081 aaKnown RBP12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 CEP72Q9P209 647 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 RHOBTB3O94955 611 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 FTCDO95954 541 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 ABCD1P33897 745 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 TOB1P50616 345 aaPredicted RBP12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 GUCY2DQ02846 1103 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 RASA3Q14644 834 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 KRT71Q3SY84 523 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 NAA35Q5VZE5 725 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 RBM43Q6ZSC3 357 aaKnown RBP12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 ZNF354CQ86Y25 554 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 ELOA2Q8IYF1 753 aaPredicted RBP12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 HPS3Q969F9 1004 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 EIF2AK1Q9BQI3 630 aaKnown RBP12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 LIMA1Q9UHB6 759 aaKnown RBP12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 AK9Q5TCS8 1911 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 CCDC151A5D8V7 595 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 NDUFAB1O14561 156 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 ATP5DP30049 168 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 RSBN1LQ6PCB5 846 aaPredicted RBP12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 IL17RAQ96F46 866 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 TSNARE1Q96NA8 513 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 KRT12Q99456 494 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 C7orf25Q9BPX7 421 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 TYW1Q9NV66 732 aaKnown RBP12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 PARP2Q9UGN5 583 aa12.43□□□□□ -0.42
PCDHGC3-201ENST00000308177 LRRC53A6NM62 1247 aa12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 P4HBP07237 508 aaKnown RBP12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 HDLBPQ00341 1268 aaKnown RBP12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 KRT76Q01546 638 aa12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 DPP9Q86TI2 863 aa12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 OTUD6BQ8N6M0 293 aa12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 NSUN6Q8TEA1 469 aaKnown RBP12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 FAM151AQ8WW52 585 aa12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 PARD6BQ9BYG5 372 aa12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 NKIRAS1Q9NYS0 192 aa12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 ZNF70Q9UC06 446 aaPredicted RBP12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 GOLGA8IPA6NC78 632 aa12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 GOLGA8JA6NMD2 632 aa12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 MYO1FO00160 1098 aa12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 SEC31AO94979 1220 aaKnown RBP12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 INTS8Q75QN2 995 aaKnown RBP12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 FUCA2Q9BTY2 467 aa12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 DPH5Q9H2P9 285 aa12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 RNF14Q9UBS8 474 aa12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 HPSEQ9Y251 543 aa12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 QARSP47897 775 aaKnown RBP12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 LACTBP83111 547 aaPredicted RBP12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 CCZ1BP86790 482 aa12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 CCZ1P86791 482 aaPredicted RBP12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 STK4Q13043 487 aa12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 CCDC121Q6ZUS5 278 aa12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 ARMC9Q7Z3E5 817 aa12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 PODXL2Q9NZ53 605 aa12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 SEL1LQ9UBV2 794 aa12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 PRR12Q9ULL5 1215 aa12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 M0QZ92 97 aa12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 ATP8B1O43520 1251 aa12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 SRGNP10124 158 aa12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 NFIAQ12857 509 aa12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 DAGLBQ8NCG7 672 aa12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 FAM204AQ9H8W3 233 aa12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 PCDHB4Q9Y5E5 795 aa12.42□□□□□ -0.42
PCDHGC3-201ENST00000308177 SLIT3O75094 1523 aa12.41□□□□□ -0.42
PCDHGC3-201ENST00000308177 FDX1P10109 184 aa12.41□□□□□ -0.42
PCDHGC3-201ENST00000308177 CTNNA1P35221 906 aaKnown RBP12.41□□□□□ -0.42
PCDHGC3-201ENST00000308177 YARSP54577 528 aaKnown RBP12.41□□□□□ -0.42
PCDHGC3-201ENST00000308177 ZNF653Q96CK0 615 aa12.41□□□□□ -0.42
PCDHGC3-201ENST00000308177 FAM81BQ96LP2 452 aa12.41□□□□□ -0.42
PCDHGC3-201ENST00000308177 LXNQ9BS40 222 aa12.41□□□□□ -0.42
PCDHGC3-201ENST00000308177 NRXN3Q9Y4C0 1643 aa12.41□□□□□ -0.42
PCDHGC3-201ENST00000308177 K7ERI5 159 aa12.41□□□□□ -0.42
PCDHGC3-201ENST00000308177 ZMYND10O75800 440 aa12.41□□□□□ -0.42
PCDHGC3-201ENST00000308177 APOBEC3FQ8IUX4 373 aaKnown RBP12.41□□□□□ -0.42
PCDHGC3-201ENST00000308177 MCPH1Q8NEM0 835 aa12.41□□□□□ -0.42
PCDHGC3-201ENST00000308177 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.41□□□□□ -0.42
PCDHGC3-201ENST00000308177 MMS19Q96T76 1030 aa12.41□□□□□ -0.42
PCDHGC3-201ENST00000308177 RGL1Q9NZL6 768 aa12.41□□□□□ -0.42
PCDHGC3-201ENST00000308177 SAMD15Q9P1V8 674 aa12.41□□□□□ -0.42
PCDHGC3-201ENST00000308177 TXNDC16Q9P2K2 825 aa12.41□□□□□ -0.42
PCDHGC3-201ENST00000308177 AKAP12Q02952 1782 aa12.41□□□□□ -0.42
PCDHGC3-201ENST00000308177 PEAK1Q9H792 1746 aa12.41□□□□□ -0.42
PCDHGC3-201ENST00000308177 IL1R1P14778 569 aa12.41□□□□□ -0.42
PCDHGC3-201ENST00000308177 POLR2BP30876 1174 aaKnown RBP12.41□□□□□ -0.42
PCDHGC3-201ENST00000308177 SLC15A2Q16348 729 aa12.41□□□□□ -0.42
PCDHGC3-201ENST00000308177 FBXO40Q9UH90 709 aa12.41□□□□□ -0.42
PCDHGC3-201ENST00000308177 SALL1Q9NSC2 1324 aa12.41□□□□□ -0.42
PCDHGC3-201ENST00000308177 EYA4O95677 639 aa12.4□□□□□ -0.42
PCDHGC3-201ENST00000308177 CLCN6P51797 869 aa12.4□□□□□ -0.42
PCDHGC3-201ENST00000308177 NR1I3Q14994 352 aa12.4□□□□□ -0.42
PCDHGC3-201ENST00000308177 EPHA7Q15375 998 aa12.4□□□□□ -0.42
PCDHGC3-201ENST00000308177 STXBP2Q15833 593 aa12.4□□□□□ -0.42
PCDHGC3-201ENST00000308177 E4F1Q66K89 784 aaPredicted RBP12.4□□□□□ -0.42
PCDHGC3-201ENST00000308177 DENND2CQ68D51 928 aa12.4□□□□□ -0.42
PCDHGC3-201ENST00000308177 XXYLT1Q8NBI6 393 aa12.4□□□□□ -0.42
PCDHGC3-201ENST00000308177 PDE11AQ9HCR9 933 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms