RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 LXNQ9BS40 222 aa12.6□□□□□ -0.39
SCG2-201ENST00000305409 POLR3CQ9BUI4 534 aaPredicted RBP12.6□□□□□ -0.39
SCG2-201ENST00000305409 ZSWIM4Q9H7M6 989 aa12.6□□□□□ -0.39
SCG2-201ENST00000305409 NLRC4Q9NPP4 1024 aa12.6□□□□□ -0.39
SCG2-201ENST00000305409 COL4A3BPQ9Y5P4 624 aa12.6□□□□□ -0.39
SCG2-201ENST00000305409 FRMD3A2A2Y4 597 aa12.59□□□□□ -0.39
SCG2-201ENST00000305409 TBCAO75347 108 aaKnown RBP12.59□□□□□ -0.39
SCG2-201ENST00000305409 NDUFA10O95299 355 aa12.59□□□□□ -0.39
SCG2-201ENST00000305409 EYA4O95677 639 aa12.59□□□□□ -0.39
SCG2-201ENST00000305409 ITGB3BPQ13352 177 aaPredicted RBP12.59□□□□□ -0.39
SCG2-201ENST00000305409 PPP2R5CQ13362 524 aa12.59□□□□□ -0.39
SCG2-201ENST00000305409 ARHGAP29Q52LW3 1261 aa12.59□□□□□ -0.39
SCG2-201ENST00000305409 MYCT1Q8N699 235 aa12.59□□□□□ -0.39
SCG2-201ENST00000305409 DNAJC7Q99615 494 aa12.59□□□□□ -0.39
SCG2-201ENST00000305409 CARD6Q9BX69 1037 aa12.59□□□□□ -0.39
SCG2-201ENST00000305409 TEKT3Q9BXF9 490 aa12.59□□□□□ -0.39
SCG2-201ENST00000305409 EPC1Q9H2F5 836 aa12.59□□□□□ -0.39
SCG2-201ENST00000305409 GUCA1BQ9UMX6 200 aa12.59□□□□□ -0.39
SCG2-201ENST00000305409 SIK3Q9Y2K2 1263 aa12.59□□□□□ -0.39
SCG2-201ENST00000305409 TESPA1A2RU30 521 aaPredicted RBP12.59□□□□□ -0.39
SCG2-201ENST00000305409 ATP9AO75110 1047 aa12.59□□□□□ -0.39
SCG2-201ENST00000305409 ZBED4O75132 1171 aa12.59□□□□□ -0.39
SCG2-201ENST00000305409 NR2F2P24468 414 aa12.59□□□□□ -0.39
SCG2-201ENST00000305409 BAATQ14032 418 aaPredicted RBP12.59□□□□□ -0.39
SCG2-201ENST00000305409 ENOX2Q16206 610 aaKnown RBP12.59□□□□□ -0.39
SCG2-201ENST00000305409 DCAF15Q66K64 600 aa12.59□□□□□ -0.39
SCG2-201ENST00000305409 KRT26Q7Z3Y9 468 aa12.59□□□□□ -0.39
SCG2-201ENST00000305409 RMDN3Q96TC7 470 aa12.59□□□□□ -0.39
SCG2-201ENST00000305409 EHMT1Q9H9B1 1298 aa12.59□□□□□ -0.39
SCG2-201ENST00000305409 L2HGDHQ9H9P8 463 aa12.59□□□□□ -0.39
SCG2-201ENST00000305409 PHLPP2Q6ZVD8 1323 aa12.58□□□□□ -0.4
SCG2-201ENST00000305409 FAM13AO94988 1023 aa12.58□□□□□ -0.4
SCG2-201ENST00000305409 FECHP22830 423 aa12.58□□□□□ -0.4
SCG2-201ENST00000305409 CASP4P49662 377 aa12.58□□□□□ -0.4
SCG2-201ENST00000305409 SP4Q02446 784 aa12.58□□□□□ -0.4
SCG2-201ENST00000305409 KCNMA1Q12791 1236 aa12.58□□□□□ -0.4
SCG2-201ENST00000305409 COG2Q14746 738 aa12.58□□□□□ -0.4
SCG2-201ENST00000305409 TKFCQ3LXA3 575 aa12.58□□□□□ -0.4
SCG2-201ENST00000305409 RRAGAQ7L523 313 aa12.58□□□□□ -0.4
SCG2-201ENST00000305409 ERGIC2Q96RQ1 377 aa12.58□□□□□ -0.4
SCG2-201ENST00000305409 GTPBP4Q9BZE4 634 aaKnown RBP12.58□□□□□ -0.4
SCG2-201ENST00000305409 TELO2Q9Y4R8 837 aa12.58□□□□□ -0.4
SCG2-201ENST00000305409 BRCA1P38398 1863 aaKnown RBP12.58□□□□□ -0.4
SCG2-201ENST00000305409 PITPNM2Q9BZ72 1349 aa12.58□□□□□ -0.4
SCG2-201ENST00000305409 LTBP3Q9NS15 1303 aa12.58□□□□□ -0.4
SCG2-201ENST00000305409 FGFR1OPO95684 399 aaKnown RBP12.58□□□□□ -0.4
SCG2-201ENST00000305409 ARHGAP25P42331 645 aa12.58□□□□□ -0.4
SCG2-201ENST00000305409 SNRNP48Q6IEG0 339 aaKnown RBP12.58□□□□□ -0.4
SCG2-201ENST00000305409 RNF207Q6ZRF8 634 aa12.58□□□□□ -0.4
SCG2-201ENST00000305409 C1orf186Q6ZWK4 172 aa12.58□□□□□ -0.4
SCG2-201ENST00000305409 MIER3Q7Z3K6 550 aa12.58□□□□□ -0.4
SCG2-201ENST00000305409 SLC35F6Q8N357 371 aa12.58□□□□□ -0.4
SCG2-201ENST00000305409 NHEJ1Q9H9Q4 299 aaPredicted RBP12.58□□□□□ -0.4
SCG2-201ENST00000305409 RNF146Q9NTX7 359 aa12.58□□□□□ -0.4
SCG2-201ENST00000305409 DUSP10Q9Y6W6 482 aa12.58□□□□□ -0.4
SCG2-201ENST00000305409 RCCD1A6NED2 376 aa12.57□□□□□ -0.4
SCG2-201ENST00000305409 DHX15O43143 795 aaKnown RBP12.57□□□□□ -0.4
SCG2-201ENST00000305409 HERVK_113P62684 666 aa12.57□□□□□ -0.4
SCG2-201ENST00000305409 ZBED6P86452 979 aa12.57□□□□□ -0.4
SCG2-201ENST00000305409 MTMR1Q13613 665 aa12.57□□□□□ -0.4
SCG2-201ENST00000305409 PGM5Q15124 567 aa12.57□□□□□ -0.4
SCG2-201ENST00000305409 KNOP1Q1ED39 458 aaKnown RBP12.57□□□□□ -0.4
SCG2-201ENST00000305409 UTP14CQ5TAP6 766 aaKnown RBP12.57□□□□□ -0.4
SCG2-201ENST00000305409 MCF2L2Q86YR7 1114 aa12.57□□□□□ -0.4
SCG2-201ENST00000305409 UPF1Q92900 1129 aaKnown RBP eCLIP12.57□□□□□ -0.4
SCG2-201ENST00000305409 KLRG1Q96E93 195 aa12.57□□□□□ -0.4
SCG2-201ENST00000305409 FHDC1Q9C0D6 1143 aaPredicted RBP12.57□□□□□ -0.4
SCG2-201ENST00000305409 GOLGA6L9A6NEM1 432 aa12.57□□□□□ -0.4
SCG2-201ENST00000305409 LRRC53A6NM62 1247 aa12.57□□□□□ -0.4
SCG2-201ENST00000305409 ADM5C9JUS6 153 aa12.57□□□□□ -0.4
SCG2-201ENST00000305409 ARID5AQ03989 594 aa12.57□□□□□ -0.4
SCG2-201ENST00000305409 ARHGEF16Q5VV41 709 aa12.57□□□□□ -0.4
SCG2-201ENST00000305409 ANKRD7Q92527 254 aa12.57□□□□□ -0.4
SCG2-201ENST00000305409 TUFT1Q9NNX1 390 aa12.57□□□□□ -0.4
SCG2-201ENST00000305409 PCDHB13Q9Y5F0 798 aa12.57□□□□□ -0.4
SCG2-201ENST00000305409 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.57□□□□□ -0.4
SCG2-201ENST00000305409 KIF5CO60282 957 aa12.56□□□□□ -0.4
SCG2-201ENST00000305409 AKAP3O75969 853 aa12.56□□□□□ -0.4
SCG2-201ENST00000305409 ACTN1P12814 892 aa12.56□□□□□ -0.4
SCG2-201ENST00000305409 USP14P54578 494 aa12.56□□□□□ -0.4
SCG2-201ENST00000305409 SETQ01105 290 aaPredicted RBP12.56□□□□□ -0.4
SCG2-201ENST00000305409 TMEM132BQ14DG7 1078 aa12.56□□□□□ -0.4
SCG2-201ENST00000305409 EPHA7Q15375 998 aa12.56□□□□□ -0.4
SCG2-201ENST00000305409 UGCGQ16739 394 aa12.56□□□□□ -0.4
SCG2-201ENST00000305409 DCAF17Q5H9S7 520 aaPredicted RBP12.56□□□□□ -0.4
SCG2-201ENST00000305409 APOBEC3FQ8IUX4 373 aaKnown RBP12.56□□□□□ -0.4
SCG2-201ENST00000305409 PDCL2Q8N4E4 241 aa12.56□□□□□ -0.4
SCG2-201ENST00000305409 ERO1AQ96HE7 468 aa12.56□□□□□ -0.4
SCG2-201ENST00000305409 LSM14BQ9BX40 385 aaKnown RBP12.56□□□□□ -0.4
SCG2-201ENST00000305409 LACRTQ9GZZ8 138 aa12.56□□□□□ -0.4
SCG2-201ENST00000305409 AGO4Q9HCK5 861 aaKnown RBP12.56□□□□□ -0.4
SCG2-201ENST00000305409 ZNHIT6Q9NWK9 470 aaKnown RBP12.56□□□□□ -0.4
SCG2-201ENST00000305409 ZNF112Q9UJU3 913 aa12.56□□□□□ -0.4
SCG2-201ENST00000305409 RPTORQ8N122 1335 aa12.56□□□□□ -0.4
SCG2-201ENST00000305409 FAM170AA1A519 330 aa12.56□□□□□ -0.4
SCG2-201ENST00000305409 CETN3O15182 167 aa12.56□□□□□ -0.4
SCG2-201ENST00000305409 LMNB1P20700 586 aa12.56□□□□□ -0.4
SCG2-201ENST00000305409 TCERG1LQ5VWI1 586 aa12.56□□□□□ -0.4
SCG2-201ENST00000305409 MOB2Q70IA6 237 aa12.56□□□□□ -0.4
SCG2-201ENST00000305409 EPM2AIP1Q7L775 607 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms