RNA–Protein interactions for RNA: ENST00000304990.8

COL4A3-201, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-201ENST00000304990 TRAF1Q13077 416 aa11.67□□□□□ -0.54
COL4A3-201ENST00000304990 TSHZ1Q6ZSZ6 1077 aa11.67□□□□□ -0.54
COL4A3-201ENST00000304990 STOX1Q6ZVD7 989 aa11.67□□□□□ -0.54
COL4A3-201ENST00000304990 HOMER1Q86YM7 354 aa11.67□□□□□ -0.54
COL4A3-201ENST00000304990 SAMD3Q8N6K7 520 aa11.67□□□□□ -0.54
COL4A3-201ENST00000304990 NKD2Q969F2 451 aaPredicted RBP11.67□□□□□ -0.54
COL4A3-201ENST00000304990 FAM227BQ96M60 508 aa11.67□□□□□ -0.54
COL4A3-201ENST00000304990 GPR20Q99678 358 aa11.67□□□□□ -0.54
COL4A3-201ENST00000304990 APOL5Q9BWW9 433 aa11.67□□□□□ -0.54
COL4A3-201ENST00000304990 MFSD1Q9H3U5 465 aa11.67□□□□□ -0.54
COL4A3-201ENST00000304990 EHMT1Q9H9B1 1298 aa11.67□□□□□ -0.54
COL4A3-201ENST00000304990 RC3H2Q9HBD1 1191 aaKnown RBP11.67□□□□□ -0.54
COL4A3-201ENST00000304990 AAASQ9NRG9 546 aa11.67□□□□□ -0.54
COL4A3-201ENST00000304990 PCDHB12Q9Y5F1 795 aa11.67□□□□□ -0.54
COL4A3-201ENST00000304990 PCDHGC5Q9Y5F6 944 aa11.67□□□□□ -0.54
COL4A3-201ENST00000304990 CDY2AQ9Y6F7 541 aa11.67□□□□□ -0.54
COL4A3-201ENST00000304990 C5orf42Q9H799 3197 aa11.67□□□□□ -0.54
COL4A3-201ENST00000304990 ZMYM6O95789 1325 aa11.66□□□□□ -0.54
COL4A3-201ENST00000304990 LAMA4Q16363 1823 aa11.66□□□□□ -0.54
COL4A3-201ENST00000304990 A0A0D9SFI3 127 aa11.66□□□□□ -0.54
COL4A3-201ENST00000304990 FIBPO43427 364 aa11.66□□□□□ -0.54
COL4A3-201ENST00000304990 TECP42680 631 aa11.66□□□□□ -0.54
COL4A3-201ENST00000304990 MFAP1P55081 439 aaKnown RBP11.66□□□□□ -0.54
COL4A3-201ENST00000304990 PPFIA1Q13136 1202 aa11.66□□□□□ -0.54
COL4A3-201ENST00000304990 MTMR3Q13615 1198 aa11.66□□□□□ -0.54
COL4A3-201ENST00000304990 FBXO47Q5MNV8 452 aa11.66□□□□□ -0.54
COL4A3-201ENST00000304990 MCTP2Q6DN12 878 aa11.66□□□□□ -0.54
COL4A3-201ENST00000304990 RUFY4Q6ZNE9 571 aa11.66□□□□□ -0.54
COL4A3-201ENST00000304990 KREMEN2Q8NCW0 462 aa11.66□□□□□ -0.54
COL4A3-201ENST00000304990 DNAJB3Q8WWF6 145 aa11.66□□□□□ -0.54
COL4A3-201ENST00000304990 ZSCAN10Q96SZ4 725 aaPredicted RBP11.66□□□□□ -0.54
COL4A3-201ENST00000304990 FTHL17Q9BXU8 183 aa11.66□□□□□ -0.54
COL4A3-201ENST00000304990 BCAS3Q9H6U6 928 aa11.66□□□□□ -0.54
COL4A3-201ENST00000304990 RTEL1Q9NZ71 1219 aa11.66□□□□□ -0.54
COL4A3-201ENST00000304990 TUBE1Q9UJT0 475 aa11.66□□□□□ -0.54
COL4A3-201ENST00000304990 NR2E1Q9Y466 385 aa11.66□□□□□ -0.54
COL4A3-201ENST00000304990 B4E1Z4 1266 aa11.65□□□□□ -0.54
COL4A3-201ENST00000304990 KLRF2D3W0D1 207 aa11.65□□□□□ -0.54
COL4A3-201ENST00000304990 OPLAHO14841 1288 aa11.65□□□□□ -0.54
COL4A3-201ENST00000304990 ZBTB5O15062 677 aa11.65□□□□□ -0.54
COL4A3-201ENST00000304990 STAM2O75886 525 aa11.65□□□□□ -0.54
COL4A3-201ENST00000304990 MARK3P27448 753 aa11.65□□□□□ -0.54
COL4A3-201ENST00000304990 CD52P31358 61 aa11.65□□□□□ -0.54
COL4A3-201ENST00000304990 NBL1P41271 181 aa11.65□□□□□ -0.54
COL4A3-201ENST00000304990 IGBP1P78318 339 aa11.65□□□□□ -0.54
COL4A3-201ENST00000304990 MRPS6P82932 125 aaKnown RBP11.65□□□□□ -0.54
COL4A3-201ENST00000304990 RBM10P98175 930 aaKnown RBP11.65□□□□□ -0.54
COL4A3-201ENST00000304990 UBE3AQ05086 875 aa11.65□□□□□ -0.54
COL4A3-201ENST00000304990 MGAT3Q09327 533 aa11.65□□□□□ -0.54
COL4A3-201ENST00000304990 C20orf194Q5TEA3 1177 aa11.65□□□□□ -0.54
COL4A3-201ENST00000304990 IER5Q5VY09 327 aa11.65□□□□□ -0.54
COL4A3-201ENST00000304990 LLGL2Q6P1M3 1020 aa11.65□□□□□ -0.54
COL4A3-201ENST00000304990 FRMD5Q7Z6J6 570 aa11.65□□□□□ -0.54
COL4A3-201ENST00000304990 THNSL1Q8IYQ7 743 aa11.65□□□□□ -0.54
COL4A3-201ENST00000304990 ADSSL1Q8N142 457 aa11.65□□□□□ -0.54
COL4A3-201ENST00000304990 CDCA3Q99618 268 aaPredicted RBP11.65□□□□□ -0.54
COL4A3-201ENST00000304990 UBAC1Q9BSL1 405 aa11.65□□□□□ -0.54
COL4A3-201ENST00000304990 FAM49AQ9H0Q0 323 aaPredicted RBP11.65□□□□□ -0.54
COL4A3-201ENST00000304990 SCG2P13521 617 aa11.64□□□□□ -0.55
COL4A3-201ENST00000304990 TCF7P36402 384 aaPredicted RBP11.64□□□□□ -0.55
COL4A3-201ENST00000304990 NT5C2P49902 561 aa11.64□□□□□ -0.55
COL4A3-201ENST00000304990 ADAM17P78536 824 aa11.64□□□□□ -0.55
COL4A3-201ENST00000304990 GHRHRQ02643 423 aa11.64□□□□□ -0.55
COL4A3-201ENST00000304990 PAK2Q13177 524 aa11.64□□□□□ -0.55
COL4A3-201ENST00000304990 NMIQ13287 307 aaPredicted RBP11.64□□□□□ -0.55
COL4A3-201ENST00000304990 GRIK4Q16099 956 aa11.64□□□□□ -0.55
COL4A3-201ENST00000304990 DUSP6Q16828 381 aa11.64□□□□□ -0.55
COL4A3-201ENST00000304990 IFIT1BQ5T764 474 aaKnown RBP11.64□□□□□ -0.55
COL4A3-201ENST00000304990 UBALD2Q8IYN6 164 aa11.64□□□□□ -0.55
COL4A3-201ENST00000304990 ENAHQ8N8S7 591 aaPredicted RBP11.64□□□□□ -0.55
COL4A3-201ENST00000304990 GIMAP8Q8ND71 665 aaPredicted RBP11.64□□□□□ -0.55
COL4A3-201ENST00000304990 SUSD6Q92537 303 aa11.64□□□□□ -0.55
COL4A3-201ENST00000304990 GLG1Q92896 1179 aa11.64□□□□□ -0.55
COL4A3-201ENST00000304990 TMEM260Q9NX78 707 aa11.64□□□□□ -0.55
COL4A3-201ENST00000304990 SORCS3Q9UPU3 1222 aa11.64□□□□□ -0.55
COL4A3-201ENST00000304990 PCDHB7Q9Y5E2 793 aa11.64□□□□□ -0.55
COL4A3-201ENST00000304990 SPATA31C2B4DYI2 1134 aa11.63□□□□□ -0.55
COL4A3-201ENST00000304990 PPP1R11O60927 126 aaPredicted RBP11.63□□□□□ -0.55
COL4A3-201ENST00000304990 FGF18O76093 207 aa11.63□□□□□ -0.55
COL4A3-201ENST00000304990 RPLP2P05387 115 aaKnown RBP11.63□□□□□ -0.55
COL4A3-201ENST00000304990 GATMP50440 423 aa11.63□□□□□ -0.55
COL4A3-201ENST00000304990 TMEM62Q0P6H9 643 aa11.63□□□□□ -0.55
COL4A3-201ENST00000304990 PLPP4Q5VZY2 271 aa11.63□□□□□ -0.55
COL4A3-201ENST00000304990 PDE12Q6L8Q7 609 aaKnown RBP11.63□□□□□ -0.55
COL4A3-201ENST00000304990 CES5AQ6NT32 575 aa11.63□□□□□ -0.55
COL4A3-201ENST00000304990 ANKRD54Q6NXT1 300 aa11.63□□□□□ -0.55
COL4A3-201ENST00000304990 ZNF589Q86UQ0 364 aaPredicted RBP11.63□□□□□ -0.55
COL4A3-201ENST00000304990 NLRX1Q86UT6 975 aa11.63□□□□□ -0.55
COL4A3-201ENST00000304990 STAG2Q8N3U4 1231 aa11.63□□□□□ -0.55
COL4A3-201ENST00000304990 TMEM105Q8N8V8 129 aa11.63□□□□□ -0.55
COL4A3-201ENST00000304990 KCNG4Q8TDN1 519 aa11.63□□□□□ -0.55
COL4A3-201ENST00000304990 ATP8B4Q8TF62 1192 aa11.63□□□□□ -0.55
COL4A3-201ENST00000304990 LINC01599Q8WXQ3 324 aa11.63□□□□□ -0.55
COL4A3-201ENST00000304990 RILPL2Q969X0 211 aa11.63□□□□□ -0.55
COL4A3-201ENST00000304990 AGO3Q9H9G7 860 aaKnown RBP11.63□□□□□ -0.55
COL4A3-201ENST00000304990 ENTPD7Q9NQZ7 604 aa11.63□□□□□ -0.55
COL4A3-201ENST00000304990 ERAP1Q9NZ08 941 aa11.63□□□□□ -0.55
COL4A3-201ENST00000304990 TRPV2Q9Y5S1 764 aa11.63□□□□□ -0.55
COL4A3-201ENST00000304990 USP34Q70CQ2 3546 aa11.63□□□□□ -0.55
COL4A3-201ENST00000304990 ZDBF2Q9HCK1 2354 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms