RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 TESPA1A2RU30 521 aaPredicted RBP24.72■■□□□ 1.55
SMAD1-201ENST00000302085 AKR1B15C9JRZ8 316 aaPredicted RBP24.72■■□□□ 1.55
SMAD1-201ENST00000302085 PPIL2Q13356 520 aa24.72■■□□□ 1.55
SMAD1-201ENST00000302085 LRRC55Q6ZSA7 311 aa24.72■■□□□ 1.55
SMAD1-201ENST00000302085 PPFIBP1Q86W92 1011 aa24.72■■□□□ 1.55
SMAD1-201ENST00000302085 LOC285556D6RIA3 1793 aa24.72■■□□□ 1.55
SMAD1-201ENST00000302085 NKRFO15226 690 aaKnown RBP eCLIP24.71■■□□□ 1.55
SMAD1-201ENST00000302085 NRDCO43847 1150 aa24.71■■□□□ 1.55
SMAD1-201ENST00000302085 P4HBP07237 508 aaKnown RBP24.71■■□□□ 1.55
SMAD1-201ENST00000302085 ARMC9Q7Z3E5 817 aa24.71■■□□□ 1.55
SMAD1-201ENST00000302085 CCAR2Q8N163 923 aaKnown RBP24.71■■□□□ 1.55
SMAD1-201ENST00000302085 CPLX3Q8WVH0 158 aa24.71■■□□□ 1.55
SMAD1-201ENST00000302085 TSG101Q99816 390 aa24.71■■□□□ 1.55
SMAD1-201ENST00000302085 KCNJ6P48051 423 aa24.71■■□□□ 1.55
SMAD1-201ENST00000302085 CASP5P51878 434 aa24.71■■□□□ 1.55
SMAD1-201ENST00000302085 E4F1Q66K89 784 aaPredicted RBP24.71■■□□□ 1.55
SMAD1-201ENST00000302085 PNMA8AQ86V59 439 aaPredicted RBP24.71■■□□□ 1.55
SMAD1-201ENST00000302085 NELFCDQ8IXH7 590 aa24.71■■□□□ 1.55
SMAD1-201ENST00000302085 GPRASP2Q96D09 838 aa24.71■■□□□ 1.55
SMAD1-201ENST00000302085 INPP4AQ96PE3 977 aaPredicted RBP24.71■■□□□ 1.55
SMAD1-201ENST00000302085 KCTD10Q9H3F6 313 aa24.71■■□□□ 1.55
SMAD1-201ENST00000302085 RGS20O76081 388 aa24.7■■□□□ 1.54
SMAD1-201ENST00000302085 FGFR1OPO95684 399 aaKnown RBP24.7■■□□□ 1.54
SMAD1-201ENST00000302085 PRKCSHP14314 528 aaPredicted RBP24.7■■□□□ 1.54
SMAD1-201ENST00000302085 MTIF2P46199 727 aaKnown RBP24.7■■□□□ 1.54
SMAD1-201ENST00000302085 MOGSQ13724 837 aa24.7■■□□□ 1.54
SMAD1-201ENST00000302085 DNTTIP2Q5QJE6 756 aaKnown RBP24.7■■□□□ 1.54
SMAD1-201ENST00000302085 LDLRAD1Q5T700 205 aa24.7■■□□□ 1.54
SMAD1-201ENST00000302085 EPM2AIP1Q7L775 607 aaPredicted RBP24.7■■□□□ 1.54
SMAD1-201ENST00000302085 RIOX2Q8IUF8 465 aa24.7■■□□□ 1.54
SMAD1-201ENST00000302085 OPTNQ96CV9 577 aa24.7■■□□□ 1.54
SMAD1-201ENST00000302085 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.7■■□□□ 1.54
SMAD1-201ENST00000302085 B4DLN1 442 aa24.69■■□□□ 1.54
SMAD1-201ENST00000302085 CCNE2O96020 404 aa24.69■■□□□ 1.54
SMAD1-201ENST00000302085 GYPCP04921 128 aa24.69■■□□□ 1.54
SMAD1-201ENST00000302085 MIIPQ5JXC2 388 aa24.69■■□□□ 1.54
SMAD1-201ENST00000302085 NLRX1Q86UT6 975 aa24.69■■□□□ 1.54
SMAD1-201ENST00000302085 BAG1Q99933 345 aaPredicted RBP24.69■■□□□ 1.54
SMAD1-201ENST00000302085 ASCC2Q9H1I8 757 aaPredicted RBP24.69■■□□□ 1.54
SMAD1-201ENST00000302085 ZSWIM4Q9H7M6 989 aa24.69■■□□□ 1.54
SMAD1-201ENST00000302085 COL4A3BPQ9Y5P4 624 aa24.69■■□□□ 1.54
SMAD1-201ENST00000302085 SFI1A8K8P3 1242 aa24.69■■□□□ 1.54
SMAD1-201ENST00000302085 TBCAO75347 108 aaKnown RBP24.69■■□□□ 1.54
SMAD1-201ENST00000302085 CASP14P31944 242 aa24.69■■□□□ 1.54
SMAD1-201ENST00000302085 DNM2P50570 870 aa24.69■■□□□ 1.54
SMAD1-201ENST00000302085 IRX3P78415 501 aaPredicted RBP24.69■■□□□ 1.54
SMAD1-201ENST00000302085 PANX2Q96RD6 677 aa24.69■■□□□ 1.54
SMAD1-201ENST00000302085 TRMT1Q9NXH9 659 aaKnown RBP24.69■■□□□ 1.54
SMAD1-201ENST00000302085 AGTPBP1Q9UPW5 1226 aa24.69■■□□□ 1.54
SMAD1-201ENST00000302085 SAMM50Q9Y512 469 aa24.69■■□□□ 1.54
SMAD1-201ENST00000302085 A0A1W2PQC6 194 aa24.68■■□□□ 1.54
SMAD1-201ENST00000302085 RNF225M0QZC1 329 aaPredicted RBP24.68■■□□□ 1.54
SMAD1-201ENST00000302085 MAFGO15525 162 aa24.68■■□□□ 1.54
SMAD1-201ENST00000302085 KIF20AO95235 890 aa24.68■■□□□ 1.54
SMAD1-201ENST00000302085 POTEJP0CG39 1038 aa24.68■■□□□ 1.54
SMAD1-201ENST00000302085 HOXD13P35453 343 aa24.68■■□□□ 1.54
SMAD1-201ENST00000302085 FXR1P51114 621 aaKnown RBP eCLIP24.68■■□□□ 1.54
SMAD1-201ENST00000302085 NOC4LQ9BVI4 516 aaKnown RBP24.68■■□□□ 1.54
SMAD1-201ENST00000302085 A0A0G2JMZ2 1700 aa24.68■■□□□ 1.54
SMAD1-201ENST00000302085 PES1O00541 588 aaKnown RBP24.67■■□□□ 1.54
SMAD1-201ENST00000302085 CNMDO75829 334 aa24.67■■□□□ 1.54
SMAD1-201ENST00000302085 MYBP10242 640 aa24.67■■□□□ 1.54
SMAD1-201ENST00000302085 GAP43P17677 238 aa24.67■■□□□ 1.54
SMAD1-201ENST00000302085 FKBP3Q00688 224 aaKnown RBP24.67■■□□□ 1.54
SMAD1-201ENST00000302085 SPATC1LQ9H0A9 340 aa24.67■■□□□ 1.54
SMAD1-201ENST00000302085 CLEC11AQ9Y240 323 aa24.67■■□□□ 1.54
SMAD1-201ENST00000302085 TRAF5O00463 557 aa24.67■■□□□ 1.54
SMAD1-201ENST00000302085 MFAP3LO75121 409 aa24.67■■□□□ 1.54
SMAD1-201ENST00000302085 LYPLA2O95372 231 aa24.67■■□□□ 1.54
SMAD1-201ENST00000302085 GJA5P36382 358 aa24.67■■□□□ 1.54
SMAD1-201ENST00000302085 QARSP47897 775 aaKnown RBP24.67■■□□□ 1.54
SMAD1-201ENST00000302085 HERVK_113P62684 666 aa24.67■■□□□ 1.54
SMAD1-201ENST00000302085 CNTN2Q02246 1040 aa24.67■■□□□ 1.54
SMAD1-201ENST00000302085 ANKRD35Q8N283 1001 aa24.67■■□□□ 1.54
SMAD1-201ENST00000302085 KCND2Q9NZV8 630 aa24.67■■□□□ 1.54
SMAD1-201ENST00000302085 LCTP09848 1927 aa24.66■■□□□ 1.54
SMAD1-201ENST00000302085 ARHGEF35A5YM69 484 aa24.66■■□□□ 1.54
SMAD1-201ENST00000302085 STX10O60499 249 aa24.66■■□□□ 1.54
SMAD1-201ENST00000302085 FAM13AO94988 1023 aa24.66■■□□□ 1.54
SMAD1-201ENST00000302085 TPM2P07951 284 aa24.66■■□□□ 1.54
SMAD1-201ENST00000302085 JAK3P52333 1124 aa24.66■■□□□ 1.54
SMAD1-201ENST00000302085 KRT76Q01546 638 aa24.66■■□□□ 1.54
SMAD1-201ENST00000302085 MRPL44Q9H9J2 332 aaKnown RBP24.66■■□□□ 1.54
SMAD1-201ENST00000302085 FBXO40Q9UH90 709 aa24.66■■□□□ 1.54
SMAD1-201ENST00000302085 R3HCC1Q9Y3T6 440 aaKnown RBP24.66■■□□□ 1.54
SMAD1-201ENST00000302085 ASTN1O14525 1302 aa24.66■■□□□ 1.54
SMAD1-201ENST00000302085 PRPF6O94906 941 aaKnown RBP24.65■■□□□ 1.54
SMAD1-201ENST00000302085 KCNA2P16389 499 aa24.65■■□□□ 1.54
SMAD1-201ENST00000302085 TBC1D8BQ0IIM8 1120 aa24.65■■□□□ 1.54
SMAD1-201ENST00000302085 UGCGQ16739 394 aa24.65■■□□□ 1.54
SMAD1-201ENST00000302085 OLFML3Q9NRN5 406 aa24.65■■□□□ 1.54
SMAD1-201ENST00000302085 DBR1Q9UK59 544 aaKnown RBP24.65■■□□□ 1.54
SMAD1-201ENST00000302085 ARHGAP6O43182 974 aa24.65■■□□□ 1.54
SMAD1-201ENST00000302085 SFNP31947 248 aa24.65■■□□□ 1.54
SMAD1-201ENST00000302085 FSTL1Q12841 308 aa24.65■■□□□ 1.54
SMAD1-201ENST00000302085 GPAT2Q6NUI2 795 aa24.65■■□□□ 1.54
SMAD1-201ENST00000302085 ZC3H3Q8IXZ2 948 aaKnown RBP24.65■■□□□ 1.54
SMAD1-201ENST00000302085 MYCT1Q8N699 235 aa24.65■■□□□ 1.54
SMAD1-201ENST00000302085 DNERQ8NFT8 737 aa24.65■■□□□ 1.54
SMAD1-201ENST00000302085 C16orf45Q96MC5 204 aaPredicted RBP24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms