RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 SLC4A8Q2Y0W8 1093 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 CDCA2Q69YH5 1023 aaPredicted RBP11.89□□□□□ -0.51
ZNF558-201ENST00000301475 LRRC34Q8IZ02 419 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 ATP8B4Q8TF62 1192 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 EPB41L4BQ9H329 900 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 CNOT10Q9H9A5 744 aaKnown RBP11.89□□□□□ -0.51
ZNF558-201ENST00000301475 ABCF3Q9NUQ8 709 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 ROBO1Q9Y6N7 1651 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 KRIT1O00522 736 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 KIF3CO14782 793 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 TOM1O60784 492 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 GCKP35557 465 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 KCNJ2P63252 427 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 KLHL30Q0D2K2 578 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 RIPK1Q13546 671 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 PIGWQ7Z7B1 504 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 SEC14L1Q92503 715 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 ACSBG1Q96GR2 724 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 PBKQ96KB5 322 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.89□□□□□ -0.513e-7■■■■■ 30.2
ZNF558-201ENST00000301475 TRIM51Q9BSJ1 452 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 TXLNGYQ9BZA5 131 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 TRPC6Q9Y210 931 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 ATP8A1Q9Y2Q0 1164 aa11.89□□□□□ -0.51
ZNF558-201ENST00000301475 AFF2P51816 1311 aa11.88□□□□□ -0.51
ZNF558-201ENST00000301475 ZCWPW2Q504Y3 356 aa11.88□□□□□ -0.51
ZNF558-201ENST00000301475 SV2BQ7L1I2 683 aa11.88□□□□□ -0.51
ZNF558-201ENST00000301475 CENPTQ96BT3 561 aa11.88□□□□□ -0.51
ZNF558-201ENST00000301475 PNMA5Q96PV4 448 aa11.88□□□□□ -0.51
ZNF558-201ENST00000301475 NUCKS1Q9H1E3 243 aaKnown RBP11.88□□□□□ -0.51
ZNF558-201ENST00000301475 ZBTB1Q9Y2K1 713 aa11.88□□□□□ -0.51
ZNF558-201ENST00000301475 TSPY2A6NKD2 308 aa11.88□□□□□ -0.51
ZNF558-201ENST00000301475 FGFR1OPO95684 399 aaKnown RBP11.88□□□□□ -0.51
ZNF558-201ENST00000301475 GYG1P46976 350 aa11.88□□□□□ -0.51
ZNF558-201ENST00000301475 ZKSCAN8Q15776 578 aaPredicted RBP11.88□□□□□ -0.51
ZNF558-201ENST00000301475 ARHGAP27Q6ZUM4 889 aa11.88□□□□□ -0.51
ZNF558-201ENST00000301475 EGFL6Q8IUX8 553 aa11.88□□□□□ -0.51
ZNF558-201ENST00000301475 PIGBQ92521 554 aa11.88□□□□□ -0.51
ZNF558-201ENST00000301475 C8orf37Q96NL8 207 aa11.88□□□□□ -0.51
ZNF558-201ENST00000301475 SELENOSQ9BQE4 189 aa11.88□□□□□ -0.51
ZNF558-201ENST00000301475 TRIM31Q9BZY9 425 aa11.88□□□□□ -0.51
ZNF558-201ENST00000301475 COL4A3BPQ9Y5P4 624 aa11.88□□□□□ -0.51
ZNF558-201ENST00000301475 STARD3NLO95772 234 aa11.87□□□□□ -0.51
ZNF558-201ENST00000301475 PEX19P40855 299 aa11.87□□□□□ -0.51
ZNF558-201ENST00000301475 PTK2Q05397 1052 aa11.87□□□□□ -0.51
ZNF558-201ENST00000301475 ITIH4Q14624 930 aa11.87□□□□□ -0.51
ZNF558-201ENST00000301475 ANKS4BQ8N8V4 417 aa11.87□□□□□ -0.51
ZNF558-201ENST00000301475 PNMA1Q8ND90 353 aa11.87□□□□□ -0.51
ZNF558-201ENST00000301475 PRCCQ92733 491 aaPredicted RBP11.87□□□□□ -0.51
ZNF558-201ENST00000301475 KIF9Q9HAQ2 790 aa11.87□□□□□ -0.51
ZNF558-201ENST00000301475 DCP1AQ9NPI6 582 aaPredicted RBP11.87□□□□□ -0.51
ZNF558-201ENST00000301475 BARHL2Q9NY43 387 aa11.87□□□□□ -0.51
ZNF558-201ENST00000301475 MAD2L2Q9UI95 211 aa11.87□□□□□ -0.51
ZNF558-201ENST00000301475 MTMR7Q9Y216 660 aa11.87□□□□□ -0.51
ZNF558-201ENST00000301475 NR2E1Q9Y466 385 aa11.87□□□□□ -0.51
ZNF558-201ENST00000301475 KIAA1551Q9HCM1 1747 aa11.87□□□□□ -0.51
ZNF558-201ENST00000301475 ZNF804BA4D1E1 1349 aa11.87□□□□□ -0.51
ZNF558-201ENST00000301475 PVALEFA0A1B0GWK0 134 aa11.87□□□□□ -0.51
ZNF558-201ENST00000301475 ASAP2O43150 1006 aa11.87□□□□□ -0.51
ZNF558-201ENST00000301475 PPFIA2O75334 1257 aa11.87□□□□□ -0.51
ZNF558-201ENST00000301475 CHRNDQ07001 517 aa11.87□□□□□ -0.51
ZNF558-201ENST00000301475 ZNF268Q14587 947 aaPredicted RBP11.87□□□□□ -0.51
ZNF558-201ENST00000301475 ASIC2Q16515 512 aa11.87□□□□□ -0.51
ZNF558-201ENST00000301475 UBAP2Q5T6F2 1119 aaKnown RBP11.87□□□□□ -0.51
ZNF558-201ENST00000301475 TRPM8Q7Z2W7 1104 aa11.87□□□□□ -0.51
ZNF558-201ENST00000301475 ZNF571Q7Z3V5 609 aaPredicted RBP11.87□□□□□ -0.51
ZNF558-201ENST00000301475 LARP4BQ92615 738 aaKnown RBP11.87□□□□□ -0.51
ZNF558-201ENST00000301475 ELAC2Q9BQ52 826 aaKnown RBP11.87□□□□□ -0.51
ZNF558-201ENST00000301475 FGFBP2Q9BYJ0 223 aa11.87□□□□□ -0.51
ZNF558-201ENST00000301475 GANQ9H2C0 597 aa11.87□□□□□ -0.51
ZNF558-201ENST00000301475 CPVLQ9H3G5 476 aa11.87□□□□□ -0.51
ZNF558-201ENST00000301475 IL17RBQ9NRM6 502 aa11.87□□□□□ -0.51
ZNF558-201ENST00000301475 AIPL1Q9NZN9 384 aa11.87□□□□□ -0.51
ZNF558-201ENST00000301475 GGT7Q9UJ14 662 aa11.87□□□□□ -0.51
ZNF558-201ENST00000301475 ATAD5Q96QE3 1844 aa11.87□□□□□ -0.51
ZNF558-201ENST00000301475 A8MUI8 341 aa11.86□□□□□ -0.51
ZNF558-201ENST00000301475 BTNL10A8MVZ5 291 aa11.86□□□□□ -0.51
ZNF558-201ENST00000301475 CCDC188H7C350 402 aa11.86□□□□□ -0.51
ZNF558-201ENST00000301475 ALADP13716 330 aa11.86□□□□□ -0.51
ZNF558-201ENST00000301475 PDE6BP35913 854 aa11.86□□□□□ -0.51
ZNF558-201ENST00000301475 MMP13P45452 471 aa11.86□□□□□ -0.51
ZNF558-201ENST00000301475 ALDH5A1P51649 535 aaPredicted RBP11.86□□□□□ -0.51
ZNF558-201ENST00000301475 NCALDP61601 193 aa11.86□□□□□ -0.51
ZNF558-201ENST00000301475 POU5F1Q01860 360 aaKnown RBP11.86□□□□□ -0.51
ZNF558-201ENST00000301475 KCNK18Q7Z418 384 aa11.86□□□□□ -0.51
ZNF558-201ENST00000301475 CEP120Q8N960 986 aa11.86□□□□□ -0.51
ZNF558-201ENST00000301475 CALML4Q96GE6 196 aa11.86□□□□□ -0.51
ZNF558-201ENST00000301475 SPAG5Q96R06 1193 aa11.86□□□□□ -0.51
ZNF558-201ENST00000301475 FMO2Q99518 471 aa11.86□□□□□ -0.51
ZNF558-201ENST00000301475 SLITRK6Q9H5Y7 841 aa11.86□□□□□ -0.51
ZNF558-201ENST00000301475 BATF3Q9NR55 127 aa11.86□□□□□ -0.51
ZNF558-201ENST00000301475 DIAPH2O60879 1101 aa11.86□□□□□ -0.51
ZNF558-201ENST00000301475 SMNDC1O75940 238 aaKnown RBP eCLIP11.86□□□□□ -0.51
ZNF558-201ENST00000301475 UBOX5O94941 541 aa11.86□□□□□ -0.51
ZNF558-201ENST00000301475 BIRC2Q13490 618 aa11.86□□□□□ -0.51
ZNF558-201ENST00000301475 SPICE1Q8N0Z3 855 aa11.86□□□□□ -0.51
ZNF558-201ENST00000301475 ARMC2Q8NEN0 867 aa11.86□□□□□ -0.51
ZNF558-201ENST00000301475 TPCN2Q8NHX9 752 aa11.86□□□□□ -0.51
ZNF558-201ENST00000301475 SLC4A9Q96Q91 983 aa11.86□□□□□ -0.51
ZNF558-201ENST00000301475 NOP53Q9NZM5 478 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms