RNA–Protein interactions for RNA: ENST00000300146.9

PATL1-201, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PATL1, Length 4,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-201ENST00000300146 OSMRQ99650 979 aa6.4□□□□□ -1.39
PATL1-201ENST00000300146 MXRA8Q9BRK3 442 aa6.4□□□□□ -1.39
PATL1-201ENST00000300146 KATNAL1Q9BW62 490 aa6.4□□□□□ -1.39
PATL1-201ENST00000300146 SEPT9Q9UHD8 586 aaPredicted RBP6.4□□□□□ -1.39
PATL1-201ENST00000300146 INPP5FQ9Y2H2 1132 aa6.4□□□□□ -1.39
PATL1-201ENST00000300146 YBX2Q9Y2T7 364 aaKnown RBP6.4□□□□□ -1.39
PATL1-201ENST00000300146 COL11A1P12107 1806 aaPredicted RBP6.4□□□□□ -1.39
PATL1-201ENST00000300146 BTBD18B2RXH4 712 aa6.4□□□□□ -1.39
PATL1-201ENST00000300146 MEIS1O00470 390 aa6.4□□□□□ -1.39
PATL1-201ENST00000300146 EDNRBP24530 442 aa6.4□□□□□ -1.39
PATL1-201ENST00000300146 PBX3P40426 434 aa6.4□□□□□ -1.39
PATL1-201ENST00000300146 GATMP50440 423 aa6.4□□□□□ -1.39
PATL1-201ENST00000300146 IKBKEQ14164 716 aa6.4□□□□□ -1.39
PATL1-201ENST00000300146 ZNF174Q15697 407 aa6.4□□□□□ -1.39
PATL1-201ENST00000300146 PSRC1Q6PGN9 363 aaPredicted RBP6.4□□□□□ -1.39
PATL1-201ENST00000300146 MIER3Q7Z3K6 550 aa6.4□□□□□ -1.39
PATL1-201ENST00000300146 TPH2Q8IWU9 490 aa6.4□□□□□ -1.39
PATL1-201ENST00000300146 TMEM87AQ8NBN3 555 aa6.4□□□□□ -1.39
PATL1-201ENST00000300146 PPTC7Q8NI37 304 aa6.4□□□□□ -1.39
PATL1-201ENST00000300146 NLRP4Q96MN2 994 aa6.4□□□□□ -1.39
PATL1-201ENST00000300146 TOX2Q96NM4 488 aa6.4□□□□□ -1.39
PATL1-201ENST00000300146 NECAB3Q96P71 396 aaPredicted RBP6.4□□□□□ -1.39
PATL1-201ENST00000300146 C22orf23Q9BZE7 217 aa6.4□□□□□ -1.39
PATL1-201ENST00000300146 GTF2IRD1Q9UHL9 959 aa6.4□□□□□ -1.39
PATL1-201ENST00000300146 SPDYE4A6NLX3 237 aa6.39□□□□□ -1.39
PATL1-201ENST00000300146 GTPBP6O43824 516 aaPredicted RBP6.39□□□□□ -1.39
PATL1-201ENST00000300146 SRGAP2CP0DJJ0 459 aa6.39□□□□□ -1.39
PATL1-201ENST00000300146 RAD51AP2Q09MP3 1159 aa6.39□□□□□ -1.39
PATL1-201ENST00000300146 ITGB3BPQ13352 177 aaPredicted RBP6.39□□□□□ -1.39
PATL1-201ENST00000300146 PFKFB3Q16875 520 aaPredicted RBP6.39□□□□□ -1.39
PATL1-201ENST00000300146 BLIDQ8IZY5 108 aa6.39□□□□□ -1.39
PATL1-201ENST00000300146 USP38Q8NB14 1042 aa6.39□□□□□ -1.39
PATL1-201ENST00000300146 RASSF8Q8NHQ8 419 aa6.39□□□□□ -1.39
PATL1-201ENST00000300146 RIC8AQ9NPQ8 531 aa6.39□□□□□ -1.39
PATL1-201ENST00000300146 LRFN2Q9ULH4 789 aa6.39□□□□□ -1.39
PATL1-201ENST00000300146 MGAMO43451 1857 aa6.39□□□□□ -1.39
PATL1-201ENST00000300146 GSTTP1A0A1W2PQM5 241 aa6.39□□□□□ -1.39
PATL1-201ENST00000300146 SPATA31C2B4DYI2 1134 aa6.39□□□□□ -1.39
PATL1-201ENST00000300146 ZBTB39O15060 712 aa6.39□□□□□ -1.39
PATL1-201ENST00000300146 NBNO60934 754 aa6.39□□□□□ -1.39
PATL1-201ENST00000300146 ARHGEF15O94989 841 aa6.39□□□□□ -1.39
PATL1-201ENST00000300146 NPEPPSP55786 919 aa6.39□□□□□ -1.39
PATL1-201ENST00000300146 CTTNQ14247 550 aaKnown RBP6.39□□□□□ -1.39
PATL1-201ENST00000300146 PLA2G4FQ68DD2 849 aa6.39□□□□□ -1.39
PATL1-201ENST00000300146 NFRKBQ6P4R8 1299 aa6.39□□□□□ -1.39
PATL1-201ENST00000300146 CCDC60Q8IWA6 550 aaPredicted RBP6.39□□□□□ -1.39
PATL1-201ENST00000300146 CCDC148Q8NFR7 591 aa6.39□□□□□ -1.39
PATL1-201ENST00000300146 INPP4AQ96PE3 977 aaPredicted RBP6.39□□□□□ -1.39
PATL1-201ENST00000300146 ZNF302Q9NR11 478 aa6.39□□□□□ -1.39
PATL1-201ENST00000300146 ERAP1Q9NZ08 941 aa6.39□□□□□ -1.39
PATL1-201ENST00000300146 RGL1Q9NZL6 768 aa6.39□□□□□ -1.39
PATL1-201ENST00000300146 CDC25AP30304 524 aa6.39□□□□□ -1.39
PATL1-201ENST00000300146 NLRP11P59045 1033 aaKnown RBP6.39□□□□□ -1.39
PATL1-201ENST00000300146 PCNX4Q63HM2 1172 aa6.39□□□□□ -1.39
PATL1-201ENST00000300146 KSR1Q8IVT5 923 aa6.39□□□□□ -1.39
PATL1-201ENST00000300146 DHX38Q92620 1227 aaKnown RBP6.39□□□□□ -1.39
PATL1-201ENST00000300146 MTMR8Q96EF0 704 aa6.39□□□□□ -1.39
PATL1-201ENST00000300146 C16orf70Q9BSU1 422 aa6.39□□□□□ -1.39
PATL1-201ENST00000300146 UPF3AQ9H1J1 476 aaKnown RBP6.39□□□□□ -1.39
PATL1-201ENST00000300146 ZSWIM6Q9HCJ5 1215 aa6.39□□□□□ -1.39
PATL1-201ENST00000300146 DISC1Q9NRI5 854 aa6.39□□□□□ -1.39
PATL1-201ENST00000300146 USP20Q9Y2K6 914 aa6.39□□□□□ -1.39
PATL1-201ENST00000300146 CDY2AQ9Y6F7 541 aa6.39□□□□□ -1.39
PATL1-201ENST00000300146 WDR87Q6ZQQ6 2873 aa6.39□□□□□ -1.39
PATL1-201ENST00000300146 DENND3A2RUS2 1198 aa6.38□□□□□ -1.39
PATL1-201ENST00000300146 VPS37CA5D8V6 355 aaPredicted RBP6.38□□□□□ -1.39
PATL1-201ENST00000300146 H3BQ06 376 aaPredicted RBP6.38□□□□□ -1.39
PATL1-201ENST00000300146 H3BQV1 296 aa6.38□□□□□ -1.39
PATL1-201ENST00000300146 TGFB3P10600 412 aa6.38□□□□□ -1.39
PATL1-201ENST00000300146 GNAT1P11488 350 aa6.38□□□□□ -1.39
PATL1-201ENST00000300146 CST5P28325 142 aaPredicted RBP6.38□□□□□ -1.39
PATL1-201ENST00000300146 SAFBQ15424 915 aaKnown RBP eCLIP6.38□□□□□ -1.39
PATL1-201ENST00000300146 PKN1Q16512 942 aa6.38□□□□□ -1.39
PATL1-201ENST00000300146 RSPH3Q86UC2 560 aa6.38□□□□□ -1.39
PATL1-201ENST00000300146 NLRP7Q8WX94 980 aa6.38□□□□□ -1.39
PATL1-201ENST00000300146 GUCD1Q96NT3 240 aa6.38□□□□□ -1.39
PATL1-201ENST00000300146 SMARCAD1Q9H4L7 1026 aa6.38□□□□□ -1.39
PATL1-201ENST00000300146 JADE2Q9NQC1 790 aa6.38□□□□□ -1.39
PATL1-201ENST00000300146 TRIP12Q14669 1992 aaPredicted RBP6.38□□□□□ -1.39
PATL1-201ENST00000300146 DEXIO95424 95 aa6.38□□□□□ -1.39
PATL1-201ENST00000300146 CCNE2O96020 404 aa6.38□□□□□ -1.39
PATL1-201ENST00000300146 FOSP01100 380 aaPredicted RBP6.38□□□□□ -1.39
PATL1-201ENST00000300146 CDHR1Q96JP9 859 aa6.38□□□□□ -1.39
PATL1-201ENST00000300146 C17orf80Q9BSJ5 609 aa6.38□□□□□ -1.39
PATL1-201ENST00000300146 ZHX3Q9H4I2 956 aa6.38□□□□□ -1.39
PATL1-201ENST00000300146 CDHR5Q9HBB8 845 aa6.38□□□□□ -1.39
PATL1-201ENST00000300146 BRMS1Q9HCU9 246 aa6.38□□□□□ -1.39
PATL1-201ENST00000300146 DDX25Q9UHL0 483 aaKnown RBP6.38□□□□□ -1.39
PATL1-201ENST00000300146 MUC3AQ02505 3323 aa6.38□□□□□ -1.39
PATL1-201ENST00000300146 NT5C1B-RDH14C9J2C7 533 aa6.38□□□□□ -1.39
PATL1-201ENST00000300146 PRPF3O43395 683 aaKnown RBP6.38□□□□□ -1.39
PATL1-201ENST00000300146 KPNA6O60684 536 aa6.38□□□□□ -1.39
PATL1-201ENST00000300146 SLC34A2O95436 690 aa6.38□□□□□ -1.39
PATL1-201ENST00000300146 CD4P01730 458 aa6.38□□□□□ -1.39
PATL1-201ENST00000300146 TBC1D8BQ0IIM8 1120 aa6.38□□□□□ -1.39
PATL1-201ENST00000300146 MKRN4PQ13434 485 aaPredicted RBP6.38□□□□□ -1.39
PATL1-201ENST00000300146 BTG3Q14201 252 aaPredicted RBP6.38□□□□□ -1.39
PATL1-201ENST00000300146 NONOQ15233 471 aaKnown RBP eCLIP6.38□□□□□ -1.39
PATL1-201ENST00000300146 LRIT3Q3SXY7 679 aa6.38□□□□□ -1.39
PATL1-201ENST00000300146 KCNV1Q6PIU1 500 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms