RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 GFPT2O94808 682 aa11.13□□□□□ -0.63
GABRB3-201ENST00000299267 EEF1GP26641 437 aaKnown RBP11.13□□□□□ -0.63
GABRB3-201ENST00000299267 PIK3CAP42336 1068 aa11.13□□□□□ -0.63
GABRB3-201ENST00000299267 GCLMP48507 274 aa11.13□□□□□ -0.63
GABRB3-201ENST00000299267 EVCP57679 992 aa11.13□□□□□ -0.63
GABRB3-201ENST00000299267 TCP11X2Q5H9J9 407 aa11.13□□□□□ -0.63
GABRB3-201ENST00000299267 ACRBPQ8NEB7 543 aa11.13□□□□□ -0.63
GABRB3-201ENST00000299267 NOX5Q96PH1 765 aa11.13□□□□□ -0.63
GABRB3-201ENST00000299267 NAPGQ99747 312 aaPredicted RBP11.13□□□□□ -0.63
GABRB3-201ENST00000299267 SYT17Q9BSW7 474 aa11.13□□□□□ -0.63
GABRB3-201ENST00000299267 JPH1Q9HDC5 661 aaPredicted RBP11.13□□□□□ -0.63
GABRB3-201ENST00000299267 SLC9A2Q9UBY0 812 aa11.13□□□□□ -0.63
GABRB3-201ENST00000299267 KCNG1Q9UIX4 513 aa11.13□□□□□ -0.63
GABRB3-201ENST00000299267 MYMKA6NI61 221 aa11.13□□□□□ -0.63
GABRB3-201ENST00000299267 TNNC2P02585 160 aa11.13□□□□□ -0.63
GABRB3-201ENST00000299267 AFPP02771 609 aaKnown RBP11.13□□□□□ -0.63
GABRB3-201ENST00000299267 TTLL4Q14679 1199 aa11.13□□□□□ -0.63
GABRB3-201ENST00000299267 MAP9Q49MG5 647 aa11.13□□□□□ -0.63
GABRB3-201ENST00000299267 SMIM23A6NLE4 172 aa11.12□□□□□ -0.63
GABRB3-201ENST00000299267 JAK3P52333 1124 aa11.12□□□□□ -0.63
GABRB3-201ENST00000299267 FMR1Q06787 632 aaKnown RBP eCLIP11.12□□□□□ -0.63
GABRB3-201ENST00000299267 TFDP1Q14186 410 aa11.12□□□□□ -0.63
GABRB3-201ENST00000299267 LMBRD2Q68DH5 695 aaPredicted RBP11.12□□□□□ -0.63
GABRB3-201ENST00000299267 CLEC17AQ6ZS10 378 aa11.12□□□□□ -0.63
GABRB3-201ENST00000299267 FAM83AQ86UY5 434 aa11.12□□□□□ -0.63
GABRB3-201ENST00000299267 KLHL7Q8IXQ5 586 aa11.12□□□□□ -0.63
GABRB3-201ENST00000299267 RNF34Q969K3 372 aa11.12□□□□□ -0.63
GABRB3-201ENST00000299267 UBE2TQ9NPD8 197 aaPredicted RBP11.12□□□□□ -0.63
GABRB3-201ENST00000299267 ZNF215Q9UL58 517 aaPredicted RBP11.12□□□□□ -0.63
GABRB3-201ENST00000299267 RGPD2P0DJD1 1756 aa11.12□□□□□ -0.63
GABRB3-201ENST00000299267 IGSF3O75054 1194 aa11.12□□□□□ -0.63
GABRB3-201ENST00000299267 TRIM49P0CI25 452 aa11.12□□□□□ -0.63
GABRB3-201ENST00000299267 TRIM49CP0CI26 452 aa11.12□□□□□ -0.63
GABRB3-201ENST00000299267 ARP10275 920 aa11.12□□□□□ -0.63
GABRB3-201ENST00000299267 LMAN1P49257 510 aa11.12□□□□□ -0.63
GABRB3-201ENST00000299267 CKAP4Q07065 602 aaKnown RBP11.12□□□□□ -0.63
GABRB3-201ENST00000299267 TMEM62Q0P6H9 643 aa11.12□□□□□ -0.63
GABRB3-201ENST00000299267 NEDD9Q14511 834 aa11.12□□□□□ -0.63
GABRB3-201ENST00000299267 MTERF4Q7Z6M4 381 aaKnown RBP11.12□□□□□ -0.63
GABRB3-201ENST00000299267 ILDR1Q86SU0 546 aaPredicted RBP11.12□□□□□ -0.63
GABRB3-201ENST00000299267 C7orf31Q8N865 590 aa11.12□□□□□ -0.63
GABRB3-201ENST00000299267 DPF2Q92785 391 aa11.12□□□□□ -0.63
GABRB3-201ENST00000299267 CCDC114Q96M63 670 aa11.12□□□□□ -0.63
GABRB3-201ENST00000299267 NUB1Q9Y5A7 615 aa11.12□□□□□ -0.63
GABRB3-201ENST00000299267 GAKO14976 1311 aa11.12□□□□□ -0.63
GABRB3-201ENST00000299267 ABL1P00519 1130 aa11.12□□□□□ -0.63
GABRB3-201ENST00000299267 MXI1P50539 228 aa11.12□□□□□ -0.63
GABRB3-201ENST00000299267 PSMC5P62195 406 aa11.12□□□□□ -0.63
GABRB3-201ENST00000299267 CATSPER4Q7RTX7 472 aa11.12□□□□□ -0.63
GABRB3-201ENST00000299267 GPC2Q8N158 579 aa11.12□□□□□ -0.63
GABRB3-201ENST00000299267 ZNF384Q8TF68 577 aa11.12□□□□□ -0.63
GABRB3-201ENST00000299267 FAM213AQ9BRX8 229 aa11.12□□□□□ -0.63
GABRB3-201ENST00000299267 MSTO1Q9BUK6 570 aa11.12□□□□□ -0.63
GABRB3-201ENST00000299267 EHD4Q9H223 541 aa11.12□□□□□ -0.63
GABRB3-201ENST00000299267 PDS5AQ29RF7 1337 aaKnown RBP11.11□□□□□ -0.63
GABRB3-201ENST00000299267 HIP1RO75146 1068 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 STAT5BP51692 787 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 MAP2K1Q02750 393 aaPredicted RBP11.11□□□□□ -0.63
GABRB3-201ENST00000299267 PTPAQ15257 358 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 PEX26Q7Z412 305 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 OPTNQ96CV9 577 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 ADAMTS1Q9UHI8 967 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 MYL1P05976 194 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 SLC8A3P57103 927 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 PPP2R3AQ06190 1150 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 ZC2HC1CQ53FD0 456 aaPredicted RBP11.11□□□□□ -0.63
GABRB3-201ENST00000299267 CDR2LQ86X02 465 aaPredicted RBP11.11□□□□□ -0.63
GABRB3-201ENST00000299267 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.11□□□□□ -0.63
GABRB3-201ENST00000299267 GPRC5DQ9NZD1 345 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 SYNJ2BP-COX16A0A087WUM0 186 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 ERICH4A6NGS2 130 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 H0YCG3 227 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 NR3C1P04150 777 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 CYP2C8P10632 490 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 YWHABP31946 246 aaKnown RBP11.11□□□□□ -0.63
GABRB3-201ENST00000299267 LACTBP83111 547 aaPredicted RBP11.11□□□□□ -0.63
GABRB3-201ENST00000299267 ANKRD40Q6AI12 368 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 ERO1BQ86YB8 467 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 NT5C1BQ96P26 610 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 CCSER1Q9C0I3 900 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 TMEM206Q9H813 350 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 ARFGAP3Q9NP61 516 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 PRDM10Q9NQV6 1147 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 COX16Q9P0S2 106 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 MSH4O15457 936 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 C6orf222P0C671 652 aaPredicted RBP11.11□□□□□ -0.63
GABRB3-201ENST00000299267 FDX1P10109 184 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 EPHA7Q15375 998 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 NAA35Q5VZE5 725 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 DAAM2Q86T65 1068 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 MSANTD4Q8NCY6 345 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 GOLGA1Q92805 767 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 PURBQ96QR8 312 aaKnown RBP11.11□□□□□ -0.63
GABRB3-201ENST00000299267 MAP3K14Q99558 947 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 AGTPBP1Q9UPW5 1226 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 PCDHB4Q9Y5E5 795 aa11.11□□□□□ -0.63
GABRB3-201ENST00000299267 A0A1W2PRG0 241 aa11.1□□□□□ -0.63
GABRB3-201ENST00000299267 TLDC2A0PJX2 215 aa11.1□□□□□ -0.63
GABRB3-201ENST00000299267 CLDN3O15551 220 aa11.1□□□□□ -0.63
GABRB3-201ENST00000299267 PDIA5Q14554 519 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms