RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 HAS3O00219 553 aa23.93■■□□□ 1.42
SMCO4-201ENST00000298966 PLEKHA8P1O95397 391 aa23.93■■□□□ 1.42
SMCO4-201ENST00000298966 ZNF286BP0CG31 522 aa23.93■■□□□ 1.42
SMCO4-201ENST00000298966 EPC2Q52LR7 807 aa23.93■■□□□ 1.42
SMCO4-201ENST00000298966 EP400NLQ6ZTU2 488 aa23.93■■□□□ 1.42
SMCO4-201ENST00000298966 DHX37Q8IY37 1157 aaKnown RBP23.93■■□□□ 1.42
SMCO4-201ENST00000298966 BANK1Q8NDB2 785 aa23.93■■□□□ 1.42
SMCO4-201ENST00000298966 DBF4BQ8NFT6 615 aa23.93■■□□□ 1.42
SMCO4-201ENST00000298966 SP7Q8TDD2 431 aaPredicted RBP23.93■■□□□ 1.42
SMCO4-201ENST00000298966 WNT8BQ93098 351 aa23.93■■□□□ 1.42
SMCO4-201ENST00000298966 UBA5Q9GZZ9 404 aa23.93■■□□□ 1.42
SMCO4-201ENST00000298966 MRVI1Q9Y6F6 885 aa23.93■■□□□ 1.42
SMCO4-201ENST00000298966 KLRF2D3W0D1 207 aa23.92■■□□□ 1.42
SMCO4-201ENST00000298966 EIF3JO75822 258 aaKnown RBP23.92■■□□□ 1.42
SMCO4-201ENST00000298966 GOLGA8HP0CJ92 632 aa23.92■■□□□ 1.42
SMCO4-201ENST00000298966 NHLH1Q02575 133 aa23.92■■□□□ 1.42
SMCO4-201ENST00000298966 CDC37Q16543 378 aaPredicted RBP23.92■■□□□ 1.42
SMCO4-201ENST00000298966 ARHGEF16Q5VV41 709 aa23.92■■□□□ 1.42
SMCO4-201ENST00000298966 ATL3Q6DD88 541 aa23.92■■□□□ 1.42
SMCO4-201ENST00000298966 SRBD1Q8N5C6 995 aaKnown RBP23.92■■□□□ 1.42
SMCO4-201ENST00000298966 PPTC7Q8NI37 304 aa23.92■■□□□ 1.42
SMCO4-201ENST00000298966 COL20A1Q9P218 1284 aa23.92■■□□□ 1.42
SMCO4-201ENST00000298966 TCHHQ07283 1943 aa23.92■■□□□ 1.42
SMCO4-201ENST00000298966 POTEB3A0JP26 581 aa23.91■■□□□ 1.42
SMCO4-201ENST00000298966 hCG_1984214I3L0E3 225 aa23.91■■□□□ 1.42
SMCO4-201ENST00000298966 ZNF200P98182 395 aaPredicted RBP23.91■■□□□ 1.42
SMCO4-201ENST00000298966 GPM6BQ13491 265 aa23.91■■□□□ 1.42
SMCO4-201ENST00000298966 SAFBQ15424 915 aaKnown RBP eCLIP23.91■■□□□ 1.42
SMCO4-201ENST00000298966 POTEBQ6S5H4 581 aa23.91■■□□□ 1.42
SMCO4-201ENST00000298966 ZNF713Q8N859 430 aaPredicted RBP23.91■■□□□ 1.42
SMCO4-201ENST00000298966 PABPC5Q96DU9 382 aaKnown RBP23.91■■□□□ 1.42
SMCO4-201ENST00000298966 CPVLQ9H3G5 476 aa23.91■■□□□ 1.42
SMCO4-201ENST00000298966 SH3GLB2Q9NR46 395 aa23.91■■□□□ 1.42
SMCO4-201ENST00000298966 PRKAG3Q9UGI9 489 aa23.91■■□□□ 1.42
SMCO4-201ENST00000298966 MYO7AQ13402 2215 aa23.9■■□□□ 1.42
SMCO4-201ENST00000298966 RSPH10B2B2RC85 870 aa23.9■■□□□ 1.42
SMCO4-201ENST00000298966 RSPH10BP0C881 870 aa23.9■■□□□ 1.42
SMCO4-201ENST00000298966 EIF2AK2P19525 551 aaKnown RBP23.9■■□□□ 1.42
SMCO4-201ENST00000298966 THPOP40225 353 aa23.9■■□□□ 1.42
SMCO4-201ENST00000298966 PFKFB3Q16875 520 aaPredicted RBP23.9■■□□□ 1.42
SMCO4-201ENST00000298966 TCEAL5Q5H9L2 206 aa23.9■■□□□ 1.42
SMCO4-201ENST00000298966 BRAPQ7Z569 592 aa23.9■■□□□ 1.42
SMCO4-201ENST00000298966 FBXL18Q96ME1 805 aa23.9■■□□□ 1.42
SMCO4-201ENST00000298966 YME1L1Q96TA2 773 aa23.9■■□□□ 1.42
SMCO4-201ENST00000298966 V9GY48 417 aaPredicted RBP23.9■■□□□ 1.42
SMCO4-201ENST00000298966 NLRC5Q86WI3 1866 aa23.9■■□□□ 1.42
SMCO4-201ENST00000298966 H3BNC9 293 aa23.89■■□□□ 1.41
SMCO4-201ENST00000298966 DTNBO60941 627 aa23.89■■□□□ 1.41
SMCO4-201ENST00000298966 SCG2P13521 617 aa23.89■■□□□ 1.41
SMCO4-201ENST00000298966 ZP2Q05996 745 aa23.89■■□□□ 1.41
SMCO4-201ENST00000298966 MKRN4PQ13434 485 aaPredicted RBP23.89■■□□□ 1.41
SMCO4-201ENST00000298966 FOXD4L5Q5VV16 416 aaPredicted RBP23.89■■□□□ 1.41
SMCO4-201ENST00000298966 FOXD4L4Q8WXT5 416 aaPredicted RBP23.89■■□□□ 1.41
SMCO4-201ENST00000298966 NSUN3Q9H649 340 aaKnown RBP23.89■■□□□ 1.41
SMCO4-201ENST00000298966 RIOX1Q9H6W3 641 aa23.89■■□□□ 1.41
SMCO4-201ENST00000298966 MRPL11Q9Y3B7 192 aaKnown RBP23.89■■□□□ 1.41
SMCO4-201ENST00000298966 ZNF318Q5VUA4 2279 aa23.88■■□□□ 1.41
SMCO4-201ENST00000298966 PPFIA4O75335 1185 aa23.88■■□□□ 1.41
SMCO4-201ENST00000298966 NR3C2P08235 984 aa23.88■■□□□ 1.41
SMCO4-201ENST00000298966 RESTQ13127 1097 aa23.88■■□□□ 1.41
SMCO4-201ENST00000298966 PLEKHG4Q58EX7 1191 aa23.88■■□□□ 1.41
SMCO4-201ENST00000298966 SERINC5Q86VE9 423 aa23.88■■□□□ 1.41
SMCO4-201ENST00000298966 STAG2Q8N3U4 1231 aa23.88■■□□□ 1.41
SMCO4-201ENST00000298966 CCDC82Q8N4S0 544 aa23.88■■□□□ 1.41
SMCO4-201ENST00000298966 CCDC12Q8WUD4 166 aaPredicted RBP23.88■■□□□ 1.41
SMCO4-201ENST00000298966 SEPT8Q92599 483 aa23.88■■□□□ 1.41
SMCO4-201ENST00000298966 RRP36Q96EU6 259 aaKnown RBP23.88■■□□□ 1.41
SMCO4-201ENST00000298966 SEC63Q9UGP8 760 aaKnown RBP23.88■■□□□ 1.41
SMCO4-201ENST00000298966 BAZ2BQ9UIF8 2168 aaKnown RBP23.87■■□□□ 1.41
SMCO4-201ENST00000298966 RBAK-RBAKDNI3L0D1 243 aa23.87■■□□□ 1.41
SMCO4-201ENST00000298966 PKN1Q16512 942 aa23.87■■□□□ 1.41
SMCO4-201ENST00000298966 GALNT17Q6IS24 598 aa23.87■■□□□ 1.41
SMCO4-201ENST00000298966 FBXO11Q86XK2 927 aa23.87■■□□□ 1.41
SMCO4-201ENST00000298966 ADHFE1Q8IWW8 467 aa23.87■■□□□ 1.41
SMCO4-201ENST00000298966 TMEM192Q8IY95 271 aa23.87■■□□□ 1.41
SMCO4-201ENST00000298966 CCDC148Q8NFR7 591 aa23.87■■□□□ 1.41
SMCO4-201ENST00000298966 BRMS1Q9HCU9 246 aa23.87■■□□□ 1.41
SMCO4-201ENST00000298966 PXMP2Q9NR77 195 aa23.87■■□□□ 1.41
SMCO4-201ENST00000298966 CLDND1Q9NY35 253 aa23.87■■□□□ 1.41
SMCO4-201ENST00000298966 RALGAPA2Q2PPJ7 1873 aa23.86■■□□□ 1.41
SMCO4-201ENST00000298966 C19orf67A6NJJ6 358 aa23.86■■□□□ 1.41
SMCO4-201ENST00000298966 UPP2O95045 317 aa23.86■■□□□ 1.41
SMCO4-201ENST00000298966 MMP1P03956 469 aa23.86■■□□□ 1.41
SMCO4-201ENST00000298966 HOXD8P13378 290 aaPredicted RBP23.86■■□□□ 1.41
SMCO4-201ENST00000298966 KRT85P78386 507 aa23.86■■□□□ 1.41
SMCO4-201ENST00000298966 HIC1Q14526 733 aa23.86■■□□□ 1.41
SMCO4-201ENST00000298966 MCTP1Q6DN14 999 aa23.86■■□□□ 1.41
SMCO4-201ENST00000298966 ADGRF4Q8IZF3 695 aa23.86■■□□□ 1.41
SMCO4-201ENST00000298966 CMTR1Q8N1G2 835 aaKnown RBP23.86■■□□□ 1.41
SMCO4-201ENST00000298966 TOP1MTQ969P6 601 aa23.86■■□□□ 1.41
SMCO4-201ENST00000298966 NCK2O43639 380 aa23.85■■□□□ 1.41
SMCO4-201ENST00000298966 CFBP00751 764 aa23.85■■□□□ 1.41
SMCO4-201ENST00000298966 COL19A1Q14993 1142 aa23.85■■□□□ 1.41
SMCO4-201ENST00000298966 QRICH1Q2TAL8 776 aa23.85■■□□□ 1.41
SMCO4-201ENST00000298966 MYSM1Q5VVJ2 828 aa23.85■■□□□ 1.41
SMCO4-201ENST00000298966 KCNV1Q6PIU1 500 aa23.85■■□□□ 1.41
SMCO4-201ENST00000298966 ATP6V0A1Q93050 837 aa23.85■■□□□ 1.41
SMCO4-201ENST00000298966 SPATA33Q96N06 139 aa23.85■■□□□ 1.41
SMCO4-201ENST00000298966 ZNF396Q96N95 335 aaPredicted RBP23.85■■□□□ 1.41
SMCO4-201ENST00000298966 FOXP1Q9H334 677 aaPredicted RBP23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms