RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 SPDYE6P0CI01 402 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 HSPA8P11142 646 aaKnown RBP11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 PCYT1AP49585 367 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 BBS9Q3SYG4 887 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 GNPTABQ3T906 1256 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 ZBTB41Q5SVQ8 909 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 PBKQ96KB5 322 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 USP44Q9H0E7 712 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 SUGCTQ9HAC7 445 aa11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 DDX25Q9UHL0 483 aaKnown RBP11.58□□□□□ -0.56
PKNOX1-201ENST00000291547 CYP2E1P05181 493 aaPredicted RBP11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 HSPD1P10809 573 aaKnown RBP11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 TRIP13Q15645 432 aaPredicted RBP11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 SEPT12Q8IYM1 358 aa11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 IFNL3Q8IZI9 196 aa11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 CCNYQ8ND76 341 aa11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 FBXL13Q8NEE6 735 aa11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 MCF2LO15068 1137 aa11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 PDIA3P30101 505 aaKnown RBP11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 DRP2Q13474 957 aa11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 C16orf87Q6PH81 154 aa11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 DHTKD1Q96HY7 919 aaPredicted RBP11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 PITPNM3Q9BZ71 974 aa11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 ZMYND12Q9H0C1 365 aa11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 LRRN2O75325 713 aa11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 PIK3CAP42336 1068 aa11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 DYNLT1P63172 113 aa11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 OCRLQ01968 901 aa11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 MAN2A1Q16706 1144 aa11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 C6orf118Q5T5N4 469 aa11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 EMBQ6PCB8 327 aa11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 FAM196AQ6ZSG2 479 aa11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 APLFQ8IW19 511 aaPredicted RBP11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 P2RX5Q93086 422 aa11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 FAM149B1Q96BN6 582 aa11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 TRIM11Q96F44 468 aa11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 THOC1Q96FV9 657 aaKnown RBP11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 OSBPL9Q96SU4 736 aa11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 SUCLA2Q9P2R7 463 aaPredicted RBP11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 PCDHB4Q9Y5E5 795 aa11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 APBA3O96018 575 aa11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 GOLGA8HP0CJ92 632 aa11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 SRGAP2BP0DMP2 458 aa11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 KPNA2P52292 529 aaKnown RBP11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 CYP27A1Q02318 531 aa11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 FAM182BQ5T319 152 aa11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 GALNT17Q6IS24 598 aa11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 MLXIPQ9HAP2 919 aa11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 MAGEF1Q9HAY2 307 aa11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 CAPN11Q9UMQ6 739 aa11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 MAGED2Q9UNF1 606 aaPredicted RBP11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 KIAA1024Q9UPX6 916 aa11.57□□□□□ -0.56
PKNOX1-201ENST00000291547 NRKQ7Z2Y5 1582 aa11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 LRRIQ4A6NIV6 560 aa11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 GOLGA8SH3BPF8 625 aa11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 GYG2O15488 501 aa11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 TTI1O43156 1089 aa11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 EIF4A3P38919 411 aaKnown RBP11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 SEPT2Q15019 361 aa11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 NFU1Q9UMS0 254 aa11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 KIF1AQ12756 1690 aa11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 MROH5Q6ZUA9 1318 aa11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 RGS12O14924 1447 aa11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 LMNAP02545 664 aaKnown RBP11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 KRT1P04264 644 aa11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 PDHA1P08559 390 aa11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 DMP1Q13316 513 aaPredicted RBP11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 KCNF1Q9H3M0 494 aa11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 STOML1Q9UBI4 398 aa11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 PPARGC1AQ9UBK2 798 aaKnown RBP11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 COL3A1P02461 1466 aaPredicted RBP11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 IQSEC2Q5JU85 1478 aa11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 FRMPD2Q68DX3 1309 aaPredicted RBP11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 A0A0G2JND7 137 aa11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 MCF2P10911 925 aa11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 RXRBP28702 533 aa11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 SCRN1Q12765 414 aa11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 CUL4AQ13619 759 aa11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 KRT27Q7Z3Y8 459 aa11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 FAM133AQ8N9E0 248 aa11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 SMCR8Q8TEV9 937 aaPredicted RBP11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 EAF2Q96CJ1 260 aaPredicted RBP11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 NUDCD1Q96RS6 583 aa11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 SPC25Q9HBM1 224 aa11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 DNAJC17Q9NVM6 304 aaKnown RBP11.56□□□□□ -0.56
PKNOX1-201ENST00000291547 DCTN3O75935 186 aa11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 NDUFA10O95299 355 aa11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 ACSL3O95573 720 aa11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 FGAP02671 866 aa11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 AFPP02771 609 aaKnown RBP11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 H2AFXP16104 143 aaPredicted RBP11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 KCNJ6P48051 423 aa11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 ZBED6P86452 979 aa11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 FKBP3Q00688 224 aaKnown RBP11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 DR1Q01658 176 aa11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 ADCY2Q08462 1091 aa11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 PLA2G4DQ86XP0 818 aa11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 AP1M1Q9BXS5 423 aa11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 HNRNPDLO14979 420 aaKnown RBP11.55□□□□□ -0.56
PKNOX1-201ENST00000291547 CRKLP46109 303 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms