RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 IGKV6D-41A0A0C4DH26 115 aa14.51□□□□□ -0.09
SLC28A1-201ENST00000286749 HSPA9P38646 679 aaKnown RBP14.51□□□□□ -0.09
SLC28A1-201ENST00000286749 MMS22LQ6ZRQ5 1243 aa14.51□□□□□ -0.09
SLC28A1-201ENST00000286749 IRF2BP2Q7Z5L9 587 aa14.51□□□□□ -0.09
SLC28A1-201ENST00000286749 ZC3H3Q8IXZ2 948 aaKnown RBP14.51□□□□□ -0.09
SLC28A1-201ENST00000286749 CNBD1Q8NA66 436 aa14.51□□□□□ -0.09
SLC28A1-201ENST00000286749 PROCA1Q8NCQ7 364 aaPredicted RBP14.51□□□□□ -0.09
SLC28A1-201ENST00000286749 FAM163AQ96GL9 167 aaPredicted RBP14.51□□□□□ -0.09
SLC28A1-201ENST00000286749 SPAG5Q96R06 1193 aa14.51□□□□□ -0.09
SLC28A1-201ENST00000286749 EPN3Q9H201 632 aa14.51□□□□□ -0.09
SLC28A1-201ENST00000286749 DAGLAQ9Y4D2 1042 aa14.51□□□□□ -0.09
SLC28A1-201ENST00000286749 POTEFA5A3E0 1075 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 USP17L15C9J2P7 530 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 USP17L13C9JLJ4 530 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 USP17L11C9JVI0 530 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 USP17L18D6R9N7 530 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 USP17L22D6RA61 530 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 USP17L17D6RBQ6 530 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 USP17L19D6RCP7 530 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 USP17L20D6RJB6 530 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 CEP104O60308 925 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 MED24O75448 989 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 TTLL1O95922 423 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 POTEIP0CG38 1075 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 HSPA1LP34931 641 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 GABPAQ06546 454 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 USP17L24Q0WX57 530 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 EDRF1Q3B7T1 1238 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 ARSHQ5FYA8 562 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 FBXW10Q5XX13 1052 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 USP17L6PQ6QN14 398 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 POTEGQ6S5H5 508 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 POTEEQ6S8J3 1075 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 KCTD1Q719H9 257 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 SLF2Q8IX21 1173 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 CENPHQ9H3R5 247 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 GGA1Q9UJY5 639 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 BTNL10A8MVZ5 291 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 PPP1R37O75864 691 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 ECHS1P30084 290 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 USP11P51784 963 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 PTGISQ16647 500 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 KCTD19Q17RG1 926 aaPredicted RBP14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 NAA35Q5VZE5 725 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 DPY19L2P1Q6NXN4 242 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 DDX42Q86XP3 938 aaKnown RBP eCLIP14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 RPGRQ92834 1020 aaKnown RBP14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 AP1M1Q9BXS5 423 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 ISCUQ9H1K1 167 aa14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 CCNL1Q9UK58 526 aaPredicted RBP14.5□□□□□ -0.09
SLC28A1-201ENST00000286749 HMGB1P1B2RPK0 211 aaPredicted RBP14.49□□□□□ -0.09
SLC28A1-201ENST00000286749 ZBTB5O15062 677 aa14.49□□□□□ -0.09
SLC28A1-201ENST00000286749 KIAA0754O94854 1291 aa14.49□□□□□ -0.09
SLC28A1-201ENST00000286749 UCHL3P15374 230 aa14.49□□□□□ -0.09
SLC28A1-201ENST00000286749 HPDP32754 393 aaPredicted RBP14.49□□□□□ -0.09
SLC28A1-201ENST00000286749 SEC24CP53992 1094 aa14.49□□□□□ -0.09
SLC28A1-201ENST00000286749 EMC10Q5UCC4 262 aa14.49□□□□□ -0.09
SLC28A1-201ENST00000286749 PPP4R3CPQ6ZMV5 832 aa14.49□□□□□ -0.09
SLC28A1-201ENST00000286749 NAGPAQ9UK23 515 aa14.49□□□□□ -0.09
SLC28A1-201ENST00000286749 ATF5Q9Y2D1 282 aaPredicted RBP14.49□□□□□ -0.09
SLC28A1-201ENST00000286749 FRMD3A2A2Y4 597 aa14.49□□□□□ -0.09
SLC28A1-201ENST00000286749 CES2O00748 559 aa14.49□□□□□ -0.09
SLC28A1-201ENST00000286749 ATP2B4P23634 1241 aa14.49□□□□□ -0.09
SLC28A1-201ENST00000286749 RFC4P35249 363 aa14.49□□□□□ -0.09
SLC28A1-201ENST00000286749 HSD17B3P37058 310 aa14.49□□□□□ -0.09
SLC28A1-201ENST00000286749 MDH1P40925 334 aaKnown RBP14.49□□□□□ -0.09
SLC28A1-201ENST00000286749 SLC12A3P55017 1021 aa14.49□□□□□ -0.09
SLC28A1-201ENST00000286749 ITGB3BPQ13352 177 aaPredicted RBP14.49□□□□□ -0.09
SLC28A1-201ENST00000286749 C10orf76Q5T2E6 689 aa14.49□□□□□ -0.09
SLC28A1-201ENST00000286749 LRRC57Q8N9N7 239 aa14.49□□□□□ -0.09
SLC28A1-201ENST00000286749 OR2W6PQ8NHA6 318 aa14.49□□□□□ -0.09
SLC28A1-201ENST00000286749 ZNF473Q8WTR7 871 aaKnown RBP14.49□□□□□ -0.09
SLC28A1-201ENST00000286749 SCFD2Q8WU76 684 aa14.49□□□□□ -0.09
SLC28A1-201ENST00000286749 PBKQ96KB5 322 aa14.49□□□□□ -0.09
SLC28A1-201ENST00000286749 DHX36Q9H2U1 1008 aaKnown RBP14.49□□□□□ -0.09
SLC28A1-201ENST00000286749 PLCB1Q9NQ66 1216 aa14.49□□□□□ -0.09
SLC28A1-201ENST00000286749 ARMCX3Q9UH62 379 aaPredicted RBP14.49□□□□□ -0.09
SLC28A1-201ENST00000286749 ATXN2Q99700 1313 aaKnown RBP14.48□□□□□ -0.09
SLC28A1-201ENST00000286749 PPARDQ03181 441 aa14.48□□□□□ -0.09
SLC28A1-201ENST00000286749 OTUD6BQ8N6M0 293 aa14.48□□□□□ -0.09
SLC28A1-201ENST00000286749 RBM46Q8TBY0 533 aaKnown RBP14.48□□□□□ -0.09
SLC28A1-201ENST00000286749 TMBIM4Q9HC24 238 aa14.48□□□□□ -0.09
SLC28A1-201ENST00000286749 DDX4Q9NQI0 724 aaKnown RBP14.48□□□□□ -0.09
SLC28A1-201ENST00000286749 TAF1LQ8IZX4 1826 aa14.48□□□□□ -0.09
SLC28A1-201ENST00000286749 GOLGA6L10A6NI86 522 aa14.48□□□□□ -0.09
SLC28A1-201ENST00000286749 MEFVO15553 781 aaPredicted RBP14.48□□□□□ -0.09
SLC28A1-201ENST00000286749 AFPP02771 609 aaKnown RBP14.48□□□□□ -0.09
SLC28A1-201ENST00000286749 PON1P27169 355 aa14.48□□□□□ -0.09
SLC28A1-201ENST00000286749 UAP1Q16222 522 aaPredicted RBP14.48□□□□□ -0.09
SLC28A1-201ENST00000286749 DCAF17Q5H9S7 520 aaPredicted RBP14.48□□□□□ -0.09
SLC28A1-201ENST00000286749 ALKBH5Q6P6C2 394 aaKnown RBP14.48□□□□□ -0.09
SLC28A1-201ENST00000286749 SUGP1Q8IWZ8 645 aaKnown RBP14.48□□□□□ -0.09
SLC28A1-201ENST00000286749 C1orf131Q8NDD1 294 aaKnown RBP14.48□□□□□ -0.09
SLC28A1-201ENST00000286749 ACTRT1Q8TDG2 376 aa14.48□□□□□ -0.09
SLC28A1-201ENST00000286749 DDX47Q9H0S4 455 aaKnown RBP14.48□□□□□ -0.09
SLC28A1-201ENST00000286749 NEUROG2Q9H2A3 272 aa14.48□□□□□ -0.09
SLC28A1-201ENST00000286749 KCNMB3Q9NPA1 279 aa14.48□□□□□ -0.09
SLC28A1-201ENST00000286749 NOC2LQ9Y3T9 749 aaKnown RBP14.48□□□□□ -0.09
SLC28A1-201ENST00000286749 CAPN7Q9Y6W3 813 aa14.48□□□□□ -0.09
SLC28A1-201ENST00000286749 TMCO5BA8MYB1 307 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms