RNA–Protein interactions for RNA: ENST00000285398.6

ERCC3-201, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC3, Length 2,750 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-201ENST00000285398 PNMA1Q8ND90 353 aa11.54□□□□□ -0.56
ERCC3-201ENST00000285398 WHAMMQ8TF30 809 aa11.54□□□□□ -0.56
ERCC3-201ENST00000285398 TTYH3Q9C0H2 523 aa11.54□□□□□ -0.56
ERCC3-201ENST00000285398 GDF3Q9NR23 364 aa11.54□□□□□ -0.56
ERCC3-201ENST00000285398 AGPAT5Q9NUQ2 364 aa11.54□□□□□ -0.56
ERCC3-201ENST00000285398 RNF14Q9UBS8 474 aa11.54□□□□□ -0.56
ERCC3-201ENST00000285398 LRWD1Q9UFC0 647 aa11.54□□□□□ -0.56
ERCC3-201ENST00000285398 LAMB1P07942 1786 aa11.54□□□□□ -0.56
ERCC3-201ENST00000285398 RPN1P04843 607 aaKnown RBP11.54□□□□□ -0.56
ERCC3-201ENST00000285398 VEGFAP15692 232 aaPredicted RBP11.54□□□□□ -0.56
ERCC3-201ENST00000285398 IBSPP21815 317 aaPredicted RBP11.54□□□□□ -0.56
ERCC3-201ENST00000285398 PRCPP42785 496 aa11.54□□□□□ -0.56
ERCC3-201ENST00000285398 CYP27A1Q02318 531 aa11.54□□□□□ -0.56
ERCC3-201ENST00000285398 SEPT2Q15019 361 aa11.54□□□□□ -0.56
ERCC3-201ENST00000285398 C11orf91Q3C1V1 193 aa11.54□□□□□ -0.56
ERCC3-201ENST00000285398 CERKLQ49MI3 558 aaPredicted RBP11.54□□□□□ -0.56
ERCC3-201ENST00000285398 ANKRD20A8PQ5CZ79 823 aa11.54□□□□□ -0.56
ERCC3-201ENST00000285398 CATIPQ7Z7H3 387 aa11.54□□□□□ -0.56
ERCC3-201ENST00000285398 FAM228AQ86W67 206 aa11.54□□□□□ -0.56
ERCC3-201ENST00000285398 IFIH1Q9BYX4 1025 aaKnown RBP11.54□□□□□ -0.56
ERCC3-201ENST00000285398 DEFB129Q9H1M3 183 aa11.54□□□□□ -0.56
ERCC3-201ENST00000285398 DHX36Q9H2U1 1008 aaKnown RBP11.54□□□□□ -0.56
ERCC3-201ENST00000285398 SH2D4AQ9H788 454 aa11.54□□□□□ -0.56
ERCC3-201ENST00000285398 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.54□□□□□ -0.56
ERCC3-201ENST00000285398 PPANQ9NQ55 473 aaKnown RBP11.54□□□□□ -0.56
ERCC3-201ENST00000285398 EXOC1Q9NV70 894 aa11.54□□□□□ -0.56
ERCC3-201ENST00000285398 TPX2Q9ULW0 747 aaKnown RBP11.54□□□□□ -0.56
ERCC3-201ENST00000285398 NFU1Q9UMS0 254 aa11.54□□□□□ -0.56
ERCC3-201ENST00000285398 GH2P01242 217 aa11.53□□□□□ -0.56
ERCC3-201ENST00000285398 SSBP05455 408 aaKnown RBP eCLIP11.53□□□□□ -0.56
ERCC3-201ENST00000285398 PCP11498 1178 aaKnown RBP11.53□□□□□ -0.56
ERCC3-201ENST00000285398 MRPS25P82663 173 aaKnown RBP11.53□□□□□ -0.56
ERCC3-201ENST00000285398 XRCC4Q13426 336 aa11.53□□□□□ -0.56
ERCC3-201ENST00000285398 PKN1Q16512 942 aa11.53□□□□□ -0.56
ERCC3-201ENST00000285398 CFAP221Q4G0U5 840 aa11.53□□□□□ -0.56
ERCC3-201ENST00000285398 TTC38Q5R3I4 469 aa11.53□□□□□ -0.56
ERCC3-201ENST00000285398 NBPF12Q5TAG4 269 aaPredicted RBP11.53□□□□□ -0.56
ERCC3-201ENST00000285398 TLDC1Q6P9B6 456 aa11.53□□□□□ -0.56
ERCC3-201ENST00000285398 NEDD1Q8NHV4 660 aa11.53□□□□□ -0.56
ERCC3-201ENST00000285398 NOC3LQ8WTT2 800 aaKnown RBP11.53□□□□□ -0.56
ERCC3-201ENST00000285398 FAM151AQ8WW52 585 aa11.53□□□□□ -0.56
ERCC3-201ENST00000285398 TNFRSF25Q93038 417 aa11.53□□□□□ -0.56
ERCC3-201ENST00000285398 BATF3Q9NR55 127 aa11.53□□□□□ -0.56
ERCC3-201ENST00000285398 TSKSQ9UJT2 592 aa11.53□□□□□ -0.56
ERCC3-201ENST00000285398 GDAQ9Y2T3 454 aa11.53□□□□□ -0.56
ERCC3-201ENST00000285398 CAPN6Q9Y6Q1 641 aa11.53□□□□□ -0.56
ERCC3-201ENST00000285398 ENTPD3O75355 529 aa11.53□□□□□ -0.56
ERCC3-201ENST00000285398 SARNPP82979 210 aaKnown RBP11.53□□□□□ -0.56
ERCC3-201ENST00000285398 NAA25Q14CX7 972 aa11.53□□□□□ -0.56
ERCC3-201ENST00000285398 PPP2R5BQ15173 497 aa11.53□□□□□ -0.56
ERCC3-201ENST00000285398 NFRKBQ6P4R8 1299 aa11.53□□□□□ -0.56
ERCC3-201ENST00000285398 USP17L2Q6R6M4 530 aa11.53□□□□□ -0.56
ERCC3-201ENST00000285398 ADSSL1Q8N142 457 aa11.53□□□□□ -0.56
ERCC3-201ENST00000285398 MTMR14Q8NCE2 650 aa11.53□□□□□ -0.56
ERCC3-201ENST00000285398 IQCDQ96DY2 449 aa11.53□□□□□ -0.56
ERCC3-201ENST00000285398 HOOK2Q96ED9 719 aa11.53□□□□□ -0.56
ERCC3-201ENST00000285398 OSBPL7Q9BZF2 842 aa11.53□□□□□ -0.56
ERCC3-201ENST00000285398 ZNF287Q9HBT7 754 aa11.53□□□□□ -0.56
ERCC3-201ENST00000285398 HAUS2Q9NVX0 235 aa11.53□□□□□ -0.56
ERCC3-201ENST00000285398 MAPK8IP1Q9UQF2 711 aa11.53□□□□□ -0.56
ERCC3-201ENST00000285398 CARSP49589 748 aaKnown RBP11.52□□□□□ -0.56
ERCC3-201ENST00000285398 PTGDRQ13258 359 aa11.52□□□□□ -0.56
ERCC3-201ENST00000285398 E2F5Q15329 346 aa11.52□□□□□ -0.56
ERCC3-201ENST00000285398 ZNF174Q15697 407 aa11.52□□□□□ -0.56
ERCC3-201ENST00000285398 LACTB2Q53H82 288 aaPredicted RBP11.52□□□□□ -0.56
ERCC3-201ENST00000285398 NAIF1Q69YI7 327 aaPredicted RBP11.52□□□□□ -0.56
ERCC3-201ENST00000285398 IFT81Q8WYA0 676 aa11.52□□□□□ -0.56
ERCC3-201ENST00000285398 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.52□□□□□ -0.56
ERCC3-201ENST00000285398 SLC24A3Q9HC58 644 aa11.52□□□□□ -0.56
ERCC3-201ENST00000285398 EPB41L5Q9HCM4 733 aa11.52□□□□□ -0.56
ERCC3-201ENST00000285398 POLD4Q9HCU8 107 aa11.52□□□□□ -0.56
ERCC3-201ENST00000285398 RBM12Q9NTZ6 932 aaKnown RBP11.52□□□□□ -0.56
ERCC3-201ENST00000285398 MTMR4Q9NYA4 1195 aa11.52□□□□□ -0.56
ERCC3-201ENST00000285398 FRMPD2Q68DX3 1309 aaPredicted RBP11.52□□□□□ -0.57
ERCC3-201ENST00000285398 A0A1W2PQJ5 194 aa11.52□□□□□ -0.57
ERCC3-201ENST00000285398 TRIM49BA6NDI0 452 aa11.52□□□□□ -0.57
ERCC3-201ENST00000285398 GCOM1H8Y6P7 765 aaPredicted RBP11.52□□□□□ -0.57
ERCC3-201ENST00000285398 DNM1LO00429 736 aa11.52□□□□□ -0.57
ERCC3-201ENST00000285398 HEXIM1O94992 359 aaKnown RBP11.52□□□□□ -0.57
ERCC3-201ENST00000285398 MYZAPP0CAP1 466 aa11.52□□□□□ -0.57
ERCC3-201ENST00000285398 CXCR5P32302 372 aa11.52□□□□□ -0.57
ERCC3-201ENST00000285398 TBC1D8BQ0IIM8 1120 aa11.52□□□□□ -0.57
ERCC3-201ENST00000285398 FIGNQ5HY92 759 aa11.52□□□□□ -0.57
ERCC3-201ENST00000285398 MAATS1Q7Z4T9 603 aa11.52□□□□□ -0.57
ERCC3-201ENST00000285398 CACNA2D3Q8IZS8 1091 aa11.52□□□□□ -0.57
ERCC3-201ENST00000285398 MAB21L3Q8N8X9 362 aa11.52□□□□□ -0.57
ERCC3-201ENST00000285398 SMCR8Q8TEV9 937 aaPredicted RBP11.52□□□□□ -0.57
ERCC3-201ENST00000285398 PIK3R5Q8WYR1 880 aa11.52□□□□□ -0.57
ERCC3-201ENST00000285398 PCMTD1Q96MG8 357 aaPredicted RBP11.52□□□□□ -0.57
ERCC3-201ENST00000285398 PCDHA13Q9Y5I0 950 aa11.52□□□□□ -0.57
ERCC3-201ENST00000285398 FOCADQ5VW36 1801 aa11.52□□□□□ -0.57
ERCC3-201ENST00000285398 B4DLN1 442 aa11.51□□□□□ -0.57
ERCC3-201ENST00000285398 TRAPPC3O43617 180 aa11.51□□□□□ -0.57
ERCC3-201ENST00000285398 MGRN1O60291 552 aa11.51□□□□□ -0.57
ERCC3-201ENST00000285398 MOCS3O95396 460 aa11.51□□□□□ -0.57
ERCC3-201ENST00000285398 GLI1P08151 1106 aa11.51□□□□□ -0.57
ERCC3-201ENST00000285398 FAM153BP0C7A2 387 aa11.51□□□□□ -0.57
ERCC3-201ENST00000285398 HPDP32754 393 aaPredicted RBP11.51□□□□□ -0.57
ERCC3-201ENST00000285398 SCTRP47872 440 aa11.51□□□□□ -0.57
ERCC3-201ENST00000285398 GUCY2DQ02846 1103 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms