RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 KLF18A0A0U1RQI7 1052 aa14.58□□□□□ -0.08
CD44-203ENST00000278386 hCG_1984214I3L0E3 225 aa14.58□□□□□ -0.08
CD44-203ENST00000278386 MAFGO15525 162 aa14.58□□□□□ -0.08
CD44-203ENST00000278386 CDC45O75419 566 aa14.58□□□□□ -0.08
CD44-203ENST00000278386 CHRNA1P02708 482 aa14.58□□□□□ -0.08
CD44-203ENST00000278386 CTNNB1P35222 781 aa14.58□□□□□ -0.08
CD44-203ENST00000278386 FGD1P98174 961 aa14.58□□□□□ -0.08
CD44-203ENST00000278386 MGAT3Q09327 533 aa14.58□□□□□ -0.08
CD44-203ENST00000278386 GPM6BQ13491 265 aa14.58□□□□□ -0.08
CD44-203ENST00000278386 TIGD5Q53EQ6 642 aa14.58□□□□□ -0.08
CD44-203ENST00000278386 TYW1BQ6NUM6 668 aa14.58□□□□□ -0.08
CD44-203ENST00000278386 ZNF713Q8N859 430 aaPredicted RBP14.58□□□□□ -0.08
CD44-203ENST00000278386 MRPL38Q96DV4 380 aaKnown RBP14.58□□□□□ -0.08
CD44-203ENST00000278386 KCNH7Q9NS40 1196 aa14.58□□□□□ -0.08
CD44-203ENST00000278386 M0QZ92 97 aa14.57□□□□□ -0.08
CD44-203ENST00000278386 DDX39AO00148 427 aaKnown RBP14.57□□□□□ -0.08
CD44-203ENST00000278386 STXBP3O00186 592 aa14.57□□□□□ -0.08
CD44-203ENST00000278386 KCNA5P22460 613 aa14.57□□□□□ -0.08
CD44-203ENST00000278386 ZNF76P36508 570 aa14.57□□□□□ -0.08
CD44-203ENST00000278386 MRPS6P82932 125 aaKnown RBP14.57□□□□□ -0.08
CD44-203ENST00000278386 KRT32Q14532 448 aa14.57□□□□□ -0.08
CD44-203ENST00000278386 LPIN1Q14693 890 aa14.57□□□□□ -0.08
CD44-203ENST00000278386 ADCK5Q3MIX3 580 aa14.57□□□□□ -0.08
CD44-203ENST00000278386 TSHZ1Q6ZSZ6 1077 aa14.57□□□□□ -0.08
CD44-203ENST00000278386 DHX32Q7L7V1 743 aaKnown RBP14.57□□□□□ -0.08
CD44-203ENST00000278386 RPAINQ86UA6 219 aa14.57□□□□□ -0.08
CD44-203ENST00000278386 TMEM192Q8IY95 271 aa14.57□□□□□ -0.08
CD44-203ENST00000278386 FIBCD1Q8N539 461 aa14.57□□□□□ -0.08
CD44-203ENST00000278386 ZBTB10Q96DT7 871 aa14.57□□□□□ -0.08
CD44-203ENST00000278386 IL17RAQ96F46 866 aa14.57□□□□□ -0.08
CD44-203ENST00000278386 BRPF3Q9ULD4 1205 aa14.57□□□□□ -0.08
CD44-203ENST00000278386 NFASCO94856 1347 aa14.57□□□□□ -0.08
CD44-203ENST00000278386 ADGRA3Q8IWK6 1321 aa14.57□□□□□ -0.08
CD44-203ENST00000278386 BDP1A6H8Y1 2624 aa14.57□□□□□ -0.08
CD44-203ENST00000278386 MBLAC1A4D2B0 266 aaPredicted RBP14.56□□□□□ -0.08
CD44-203ENST00000278386 SMCO2A6NFE2 343 aa14.56□□□□□ -0.08
CD44-203ENST00000278386 RRN3P2A6NIE6 340 aa14.56□□□□□ -0.08
CD44-203ENST00000278386 FOSP01100 380 aaPredicted RBP14.56□□□□□ -0.08
CD44-203ENST00000278386 RPLP2P05387 115 aaKnown RBP14.56□□□□□ -0.08
CD44-203ENST00000278386 INSRRP14616 1297 aa14.56□□□□□ -0.08
CD44-203ENST00000278386 ACTR2P61160 394 aa14.56□□□□□ -0.08
CD44-203ENST00000278386 AP3B2Q13367 1082 aa14.56□□□□□ -0.08
CD44-203ENST00000278386 CEP55Q53EZ4 464 aa14.56□□□□□ -0.08
CD44-203ENST00000278386 FBXO47Q5MNV8 452 aa14.56□□□□□ -0.08
CD44-203ENST00000278386 EP400NLQ6ZTU2 488 aa14.56□□□□□ -0.08
CD44-203ENST00000278386 RASEFQ8IZ41 740 aa14.56□□□□□ -0.08
CD44-203ENST00000278386 CYP2W1Q8TAV3 490 aa14.56□□□□□ -0.08
CD44-203ENST00000278386 TRAPPC12Q8WVT3 735 aa14.56□□□□□ -0.08
CD44-203ENST00000278386 TNPO1Q92973 898 aaKnown RBP14.56□□□□□ -0.08
CD44-203ENST00000278386 PCYT2Q99447 389 aa14.56□□□□□ -0.08
CD44-203ENST00000278386 C1QTNF1Q9BXJ1 281 aa14.56□□□□□ -0.08
CD44-203ENST00000278386 TMEM260Q9NX78 707 aa14.56□□□□□ -0.08
CD44-203ENST00000278386 BARHL2Q9NY43 387 aa14.56□□□□□ -0.08
CD44-203ENST00000278386 RAPGEFL1Q9UHV5 662 aa14.56□□□□□ -0.08
CD44-203ENST00000278386 TRPV2Q9Y5S1 764 aa14.56□□□□□ -0.08
CD44-203ENST00000278386 V9GY48 417 aaPredicted RBP14.56□□□□□ -0.08
CD44-203ENST00000278386 H3BNC9 293 aa14.55□□□□□ -0.08
CD44-203ENST00000278386 CSPG5O95196 566 aa14.55□□□□□ -0.08
CD44-203ENST00000278386 ARP10275 920 aa14.55□□□□□ -0.08
CD44-203ENST00000278386 CD52P31358 61 aa14.55□□□□□ -0.08
CD44-203ENST00000278386 METAP2P50579 478 aaKnown RBP eCLIP14.55□□□□□ -0.08
CD44-203ENST00000278386 EXOSC10Q01780 885 aaKnown RBP14.55□□□□□ -0.08
CD44-203ENST00000278386 TMEM62Q0P6H9 643 aa14.55□□□□□ -0.08
CD44-203ENST00000278386 FUT2Q10981 343 aa14.55□□□□□ -0.08
CD44-203ENST00000278386 ITGB3BPQ13352 177 aaPredicted RBP14.55□□□□□ -0.08
CD44-203ENST00000278386 PLCB4Q15147 1175 aa14.55□□□□□ -0.08
CD44-203ENST00000278386 MARCH8Q5T0T0 291 aa14.55□□□□□ -0.08
CD44-203ENST00000278386 BANK1Q8NDB2 785 aa14.55□□□□□ -0.08
CD44-203ENST00000278386 GLT8D2Q9H1C3 349 aa14.55□□□□□ -0.08
CD44-203ENST00000278386 AGO4Q9HCK5 861 aaKnown RBP14.55□□□□□ -0.08
CD44-203ENST00000278386 RWDD3Q9Y3V2 267 aa14.55□□□□□ -0.08
CD44-203ENST00000278386 MYO7AQ13402 2215 aa14.54□□□□□ -0.08
CD44-203ENST00000278386 BACH1O14867 736 aa14.54□□□□□ -0.08
CD44-203ENST00000278386 HMGB1P09429 215 aaKnown RBP14.54□□□□□ -0.08
CD44-203ENST00000278386 CDC27P30260 824 aa14.54□□□□□ -0.08
CD44-203ENST00000278386 SREBF1P36956 1147 aa14.54□□□□□ -0.08
CD44-203ENST00000278386 STAT5BP51692 787 aa14.54□□□□□ -0.08
CD44-203ENST00000278386 BTG3Q14201 252 aaPredicted RBP14.54□□□□□ -0.08
CD44-203ENST00000278386 TCEAL5Q5H9L2 206 aa14.54□□□□□ -0.08
CD44-203ENST00000278386 IER5Q5VY09 327 aa14.54□□□□□ -0.08
CD44-203ENST00000278386 JAKMIP3Q5VZ66 844 aa14.54□□□□□ -0.08
CD44-203ENST00000278386 TEX2Q8IWB9 1127 aa14.54□□□□□ -0.08
CD44-203ENST00000278386 C11orf84Q9BUA3 381 aaPredicted RBP14.54□□□□□ -0.08
CD44-203ENST00000278386 NSUN3Q9H649 340 aaKnown RBP14.54□□□□□ -0.08
CD44-203ENST00000278386 TCEAL9Q9UHQ7 104 aa14.54□□□□□ -0.08
CD44-203ENST00000278386 FNDC1Q4ZHG4 1894 aaPredicted RBP14.53□□□□□ -0.08
CD44-203ENST00000278386 PLXNA4Q9HCM2 1894 aa14.53□□□□□ -0.08
CD44-203ENST00000278386 POTEB3A0JP26 581 aa14.53□□□□□ -0.08
CD44-203ENST00000278386 H3BQ06 376 aaPredicted RBP14.53□□□□□ -0.08
CD44-203ENST00000278386 CPA1P15085 419 aa14.53□□□□□ -0.08
CD44-203ENST00000278386 IBSPP21815 317 aaPredicted RBP14.53□□□□□ -0.08
CD44-203ENST00000278386 CLK2P49760 499 aaKnown RBP14.53□□□□□ -0.08
CD44-203ENST00000278386 RCAN1P53805 252 aa14.53□□□□□ -0.08
CD44-203ENST00000278386 APOBRQ0VD83 1088 aa14.53□□□□□ -0.08
CD44-203ENST00000278386 PAK2Q13177 524 aa14.53□□□□□ -0.08
CD44-203ENST00000278386 TSGA10IPQ3SY00 556 aa14.53□□□□□ -0.08
CD44-203ENST00000278386 LEXMQ3ZCV2 418 aa14.53□□□□□ -0.08
CD44-203ENST00000278386 FAM160B1Q5W0V3 765 aa14.53□□□□□ -0.08
CD44-203ENST00000278386 PTCRAQ6ISU1 281 aaPredicted RBP14.53□□□□□ -0.08
CD44-203ENST00000278386 POTEBQ6S5H4 581 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms