RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 SLFN12LQ6IEE8 588 aa12.23□□□□□ -0.45
USP6NL-201ENST00000277575 CAPN12Q6ZSI9 719 aa12.23□□□□□ -0.45
USP6NL-201ENST00000277575 POTEDQ86YR6 584 aa12.23□□□□□ -0.45
USP6NL-201ENST00000277575 ANKRD42Q8N9B4 389 aa12.23□□□□□ -0.45
USP6NL-201ENST00000277575 SNX25Q9H3E2 840 aa12.23□□□□□ -0.45
USP6NL-201ENST00000277575 POLD4Q9HCU8 107 aa12.23□□□□□ -0.45
USP6NL-201ENST00000277575 PASKQ96RG2 1323 aa12.23□□□□□ -0.45
USP6NL-201ENST00000277575 CD58P19256 250 aa12.23□□□□□ -0.45
USP6NL-201ENST00000277575 ORC2Q13416 577 aaPredicted RBP12.23□□□□□ -0.45
USP6NL-201ENST00000277575 SURF1Q15526 300 aa12.23□□□□□ -0.45
USP6NL-201ENST00000277575 THNSL1Q8IYQ7 743 aa12.23□□□□□ -0.45
USP6NL-201ENST00000277575 VPS52Q8N1B4 723 aa12.23□□□□□ -0.45
USP6NL-201ENST00000277575 SRBD1Q8N5C6 995 aaKnown RBP12.23□□□□□ -0.45
USP6NL-201ENST00000277575 MB21D1Q8N884 522 aa12.23□□□□□ -0.45
USP6NL-201ENST00000277575 ZNF512BQ96KM6 892 aaPredicted RBP12.23□□□□□ -0.45
USP6NL-201ENST00000277575 OSBPL5Q9H0X9 879 aaPredicted RBP12.23□□□□□ -0.45
USP6NL-201ENST00000277575 TYW1Q9NV66 732 aaKnown RBP12.23□□□□□ -0.45
USP6NL-201ENST00000277575 TDP2O95551 362 aa12.23□□□□□ -0.45
USP6NL-201ENST00000277575 ATF2P15336 505 aa12.23□□□□□ -0.45
USP6NL-201ENST00000277575 RFX5P48382 616 aaPredicted RBP12.23□□□□□ -0.45
USP6NL-201ENST00000277575 NFX1Q12986 1120 aaKnown RBP12.23□□□□□ -0.45
USP6NL-201ENST00000277575 BANK1Q8NDB2 785 aa12.23□□□□□ -0.45
USP6NL-201ENST00000277575 MXD3Q9BW11 206 aa12.23□□□□□ -0.45
USP6NL-201ENST00000277575 GOLPH3LQ9H4A5 285 aa12.23□□□□□ -0.45
USP6NL-201ENST00000277575 NHEJ1Q9H9Q4 299 aaPredicted RBP12.23□□□□□ -0.45
USP6NL-201ENST00000277575 HOMER3Q9NSC5 361 aa12.23□□□□□ -0.45
USP6NL-201ENST00000277575 ZDHHC9Q9Y397 364 aa12.23□□□□□ -0.45
USP6NL-201ENST00000277575 I3L4J1 428 aa12.23□□□□□ -0.45
USP6NL-201ENST00000277575 SERPING1P05155 500 aa12.23□□□□□ -0.45
USP6NL-201ENST00000277575 SF3A3Q12874 501 aaKnown RBP eCLIP12.23□□□□□ -0.45
USP6NL-201ENST00000277575 ALKBH5Q6P6C2 394 aaKnown RBP12.23□□□□□ -0.45
USP6NL-201ENST00000277575 MRPL47Q9HD33 250 aaKnown RBP12.23□□□□□ -0.45
USP6NL-201ENST00000277575 MTMR4Q9NYA4 1195 aa12.23□□□□□ -0.45
USP6NL-201ENST00000277575 ANAPC4Q9UJX5 808 aa12.23□□□□□ -0.45
USP6NL-201ENST00000277575 PP2D1A8MPX8 630 aa12.22□□□□□ -0.45
USP6NL-201ENST00000277575 IPO5O00410 1097 aaKnown RBP12.22□□□□□ -0.45
USP6NL-201ENST00000277575 FDX1P10109 184 aa12.22□□□□□ -0.45
USP6NL-201ENST00000277575 STX2P32856 288 aa12.22□□□□□ -0.45
USP6NL-201ENST00000277575 GUCY1A2P33402 732 aa12.22□□□□□ -0.45
USP6NL-201ENST00000277575 PHBP35232 272 aa12.22□□□□□ -0.45
USP6NL-201ENST00000277575 MGARPQ8TDB4 240 aa12.22□□□□□ -0.45
USP6NL-201ENST00000277575 OTUD5Q96G74 571 aa12.22□□□□□ -0.45
USP6NL-201ENST00000277575 PANX2Q96RD6 677 aa12.22□□□□□ -0.45
USP6NL-201ENST00000277575 RPF1Q9H9Y2 349 aaKnown RBP12.22□□□□□ -0.45
USP6NL-201ENST00000277575 TRIM49BA6NDI0 452 aa12.22□□□□□ -0.45
USP6NL-201ENST00000277575 KIF11P52732 1056 aa12.22□□□□□ -0.45
USP6NL-201ENST00000277575 RNASELQ05823 741 aaKnown RBP12.22□□□□□ -0.45
USP6NL-201ENST00000277575 SBK1Q52WX2 424 aa12.22□□□□□ -0.45
USP6NL-201ENST00000277575 PPP1R2P3Q6NXS1 205 aa12.22□□□□□ -0.45
USP6NL-201ENST00000277575 DNAJC24Q6P3W2 148 aa12.22□□□□□ -0.45
USP6NL-201ENST00000277575 BBOF1Q8ND07 529 aa12.22□□□□□ -0.45
USP6NL-201ENST00000277575 KIF2CQ99661 725 aa12.22□□□□□ -0.45
USP6NL-201ENST00000277575 FTCDO95954 541 aa12.22□□□□□ -0.45
USP6NL-201ENST00000277575 STAT3P40763 770 aa12.22□□□□□ -0.45
USP6NL-201ENST00000277575 PRCPP42785 496 aa12.22□□□□□ -0.45
USP6NL-201ENST00000277575 QARSP47897 775 aaKnown RBP12.22□□□□□ -0.45
USP6NL-201ENST00000277575 MYO1EQ12965 1108 aa12.22□□□□□ -0.45
USP6NL-201ENST00000277575 CATSPER4Q7RTX7 472 aa12.22□□□□□ -0.45
USP6NL-201ENST00000277575 RAD54LQ92698 747 aa12.22□□□□□ -0.45
USP6NL-201ENST00000277575 DYDC2Q96IM9 177 aa12.22□□□□□ -0.45
USP6NL-201ENST00000277575 FAM167AQ96KS9 214 aa12.22□□□□□ -0.45
USP6NL-201ENST00000277575 SPZ1Q9BXG8 430 aa12.22□□□□□ -0.45
USP6NL-201ENST00000277575 IFT122Q9HBG6 1241 aa12.22□□□□□ -0.45
USP6NL-201ENST00000277575 FLT1P17948 1338 aa12.22□□□□□ -0.45
USP6NL-201ENST00000277575 POTEFA5A3E0 1075 aa12.21□□□□□ -0.45
USP6NL-201ENST00000277575 POTEIP0CG38 1075 aa12.21□□□□□ -0.45
USP6NL-201ENST00000277575 TTBK2Q6IQ55 1244 aa12.21□□□□□ -0.45
USP6NL-201ENST00000277575 POTEGQ6S5H5 508 aa12.21□□□□□ -0.45
USP6NL-201ENST00000277575 POTEEQ6S8J3 1075 aa12.21□□□□□ -0.45
USP6NL-201ENST00000277575 FBXO33Q7Z6M2 555 aa12.21□□□□□ -0.45
USP6NL-201ENST00000277575 C10orf67Q8IYJ2 551 aa12.21□□□□□ -0.45
USP6NL-201ENST00000277575 AFAP1L2Q8N4X5 818 aa12.21□□□□□ -0.45
USP6NL-201ENST00000277575 XXYLT1Q8NBI6 393 aa12.21□□□□□ -0.45
USP6NL-201ENST00000277575 GSDMBQ8TAX9 411 aa12.21□□□□□ -0.45
USP6NL-201ENST00000277575 NEK9Q8TD19 979 aa12.21□□□□□ -0.45
USP6NL-201ENST00000277575 IGDCC4Q8TDY8 1250 aa12.21□□□□□ -0.45
USP6NL-201ENST00000277575 TCP11Q8WWU5 503 aa12.21□□□□□ -0.45
USP6NL-201ENST00000277575 SEPT10Q9P0V9 454 aa12.21□□□□□ -0.45
USP6NL-201ENST00000277575 P4HBP07237 508 aaKnown RBP12.21□□□□□ -0.45
USP6NL-201ENST00000277575 CXCR5P32302 372 aa12.21□□□□□ -0.45
USP6NL-201ENST00000277575 MAPK6Q16659 721 aa12.21□□□□□ -0.45
USP6NL-201ENST00000277575 RINT1Q6NUQ1 792 aa12.21□□□□□ -0.45
USP6NL-201ENST00000277575 ATP6V0A4Q9HBG4 840 aa12.21□□□□□ -0.45
USP6NL-201ENST00000277575 DIP2AQ14689 1571 aa12.21□□□□□ -0.45
USP6NL-201ENST00000277575 KIF28PB7ZC32 967 aa12.21□□□□□ -0.45
USP6NL-201ENST00000277575 PGRMC1O00264 195 aaKnown RBP12.21□□□□□ -0.45
USP6NL-201ENST00000277575 CLDN3O15551 220 aa12.21□□□□□ -0.45
USP6NL-201ENST00000277575 MFAP3LO75121 409 aa12.21□□□□□ -0.45
USP6NL-201ENST00000277575 GMNNO75496 209 aa12.21□□□□□ -0.45
USP6NL-201ENST00000277575 LDHAP00338 332 aaKnown RBP12.21□□□□□ -0.45
USP6NL-201ENST00000277575 USP11P51784 963 aa12.21□□□□□ -0.45
USP6NL-201ENST00000277575 LMNB2Q03252 620 aa12.21□□□□□ -0.45
USP6NL-201ENST00000277575 ITKQ08881 620 aa12.21□□□□□ -0.45
USP6NL-201ENST00000277575 ANKRD20A3Q5VUR7 823 aa12.21□□□□□ -0.45
USP6NL-201ENST00000277575 LDHDQ86WU2 507 aa12.21□□□□□ -0.45
USP6NL-201ENST00000277575 METTL23Q86XA0 190 aa12.21□□□□□ -0.45
USP6NL-201ENST00000277575 PROM2Q8N271 834 aa12.21□□□□□ -0.45
USP6NL-201ENST00000277575 GIMAP8Q8ND71 665 aaPredicted RBP12.21□□□□□ -0.45
USP6NL-201ENST00000277575 LRRC4Q9HBW1 653 aa12.21□□□□□ -0.45
USP6NL-201ENST00000277575 JRKLQ9Y4A0 524 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms