RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 USP17L5A8MUK1 530 aa14.26□□□□□ -0.13
C9orf3-201ENST00000277198 IGF2BP3O00425 579 aaKnown RBP eCLIP14.26□□□□□ -0.13
C9orf3-201ENST00000277198 ENTPD3O75355 529 aa14.26□□□□□ -0.13
C9orf3-201ENST00000277198 GNA14O95837 355 aa14.26□□□□□ -0.13
C9orf3-201ENST00000277198 KIF11P52732 1056 aa14.26□□□□□ -0.13
C9orf3-201ENST00000277198 GABPAQ06546 454 aa14.26□□□□□ -0.13
C9orf3-201ENST00000277198 CCDC96Q2M329 555 aa14.26□□□□□ -0.13
C9orf3-201ENST00000277198 CCNI2Q6ZMN8 369 aaPredicted RBP14.26□□□□□ -0.13
C9orf3-201ENST00000277198 RNF10Q8N5U6 811 aaKnown RBP14.26□□□□□ -0.13
C9orf3-201ENST00000277198 PTPN18Q99952 460 aa14.26□□□□□ -0.13
C9orf3-201ENST00000277198 GLT8D2Q9H1C3 349 aa14.26□□□□□ -0.13
C9orf3-201ENST00000277198 CPVLQ9H3G5 476 aa14.26□□□□□ -0.13
C9orf3-201ENST00000277198 ARHGAP20Q9P2F6 1191 aa14.26□□□□□ -0.13
C9orf3-201ENST00000277198 RNF14Q9UBS8 474 aa14.26□□□□□ -0.13
C9orf3-201ENST00000277198 FAN1Q9Y2M0 1017 aa14.26□□□□□ -0.13
C9orf3-201ENST00000277198 CASP8AP2Q9UKL3 1982 aa14.26□□□□□ -0.13
C9orf3-201ENST00000277198 IGKV6D-41A0A0C4DH26 115 aa14.25□□□□□ -0.13
C9orf3-201ENST00000277198 ZNF263O14978 683 aa14.25□□□□□ -0.13
C9orf3-201ENST00000277198 SRGAP2O75044 1071 aa14.25□□□□□ -0.13
C9orf3-201ENST00000277198 TM4SF4P48230 202 aa14.25□□□□□ -0.13
C9orf3-201ENST00000277198 HYIQ5T013 277 aa14.25□□□□□ -0.13
C9orf3-201ENST00000277198 LRRC55Q6ZSA7 311 aa14.25□□□□□ -0.13
C9orf3-201ENST00000277198 TNS4Q8IZW8 715 aa14.25□□□□□ -0.13
C9orf3-201ENST00000277198 GOLGA6L1Q8N7Z2 621 aa14.25□□□□□ -0.13
C9orf3-201ENST00000277198 ZNF341Q9BYN7 854 aa14.25□□□□□ -0.13
C9orf3-201ENST00000277198 NT5C3AQ9H0P0 336 aa14.25□□□□□ -0.13
C9orf3-201ENST00000277198 VAT1LQ9HCJ6 419 aa14.25□□□□□ -0.13
C9orf3-201ENST00000277198 BMP2KQ9NSY1 1161 aaPredicted RBP14.25□□□□□ -0.13
C9orf3-201ENST00000277198 SWAP70Q9UH65 585 aa14.25□□□□□ -0.13
C9orf3-201ENST00000277198 CSADQ9Y600 493 aa14.25□□□□□ -0.13
C9orf3-201ENST00000277198 KDM3AQ9Y4C1 1321 aa14.25□□□□□ -0.13
C9orf3-201ENST00000277198 MACROD2A1Z1Q3 448 aa14.25□□□□□ -0.13
C9orf3-201ENST00000277198 RBAK-RBAKDNI3L0D1 243 aa14.25□□□□□ -0.13
C9orf3-201ENST00000277198 ZBTB48P10074 688 aaPredicted RBP14.25□□□□□ -0.13
C9orf3-201ENST00000277198 CAPN2P17655 700 aa14.25□□□□□ -0.13
C9orf3-201ENST00000277198 CLK2P49760 499 aaKnown RBP14.25□□□□□ -0.13
C9orf3-201ENST00000277198 MRPL12P52815 198 aaKnown RBP14.25□□□□□ -0.13
C9orf3-201ENST00000277198 FKBP3Q00688 224 aaKnown RBP14.25□□□□□ -0.13
C9orf3-201ENST00000277198 CYP27A1Q02318 531 aa14.25□□□□□ -0.13
C9orf3-201ENST00000277198 DCAF15Q66K64 600 aa14.25□□□□□ -0.13
C9orf3-201ENST00000277198 CREG2Q8IUH2 290 aa14.25□□□□□ -0.13
C9orf3-201ENST00000277198 MYOCDQ8IZQ8 938 aa14.25□□□□□ -0.13
C9orf3-201ENST00000277198 SNX29Q8TEQ0 813 aa14.25□□□□□ -0.13
C9orf3-201ENST00000277198 DDX12PQ92771 950 aa14.25□□□□□ -0.13
C9orf3-201ENST00000277198 CEP63Q96MT8 703 aa14.25□□□□□ -0.13
C9orf3-201ENST00000277198 DEF6Q9H4E7 631 aa14.25□□□□□ -0.13
C9orf3-201ENST00000277198 LUC7LQ9NQ29 371 aaKnown RBP14.25□□□□□ -0.13
C9orf3-201ENST00000277198 HPCAL4Q9UM19 191 aa14.25□□□□□ -0.13
C9orf3-201ENST00000277198 HTTP42858 3142 aa14.24□□□□□ -0.13
C9orf3-201ENST00000277198 PHF20L1A8MW92 1017 aa14.24□□□□□ -0.13
C9orf3-201ENST00000277198 CA12O43570 354 aa14.24□□□□□ -0.13
C9orf3-201ENST00000277198 SLC37A4O43826 429 aa14.24□□□□□ -0.13
C9orf3-201ENST00000277198 AKR1B10O60218 316 aa14.24□□□□□ -0.13
C9orf3-201ENST00000277198 N4BP1O75113 896 aaKnown RBP14.24□□□□□ -0.13
C9orf3-201ENST00000277198 TTLL1O95922 423 aa14.24□□□□□ -0.13
C9orf3-201ENST00000277198 GYS2P54840 703 aa14.24□□□□□ -0.13
C9orf3-201ENST00000277198 MARSP56192 900 aaKnown RBP14.24□□□□□ -0.13
C9orf3-201ENST00000277198 ASTE1Q2TB18 679 aaPredicted RBP14.24□□□□□ -0.13
C9orf3-201ENST00000277198 GPATCH4Q5T3I0 446 aaKnown RBP14.24□□□□□ -0.13
C9orf3-201ENST00000277198 BAP1Q92560 729 aa14.24□□□□□ -0.13
C9orf3-201ENST00000277198 MS4A4AQ96JQ5 239 aa14.24□□□□□ -0.13
C9orf3-201ENST00000277198 UBA5Q9GZZ9 404 aa14.24□□□□□ -0.13
C9orf3-201ENST00000277198 MMRN2Q9H8L6 949 aa14.24□□□□□ -0.13
C9orf3-201ENST00000277198 TMEM260Q9NX78 707 aa14.24□□□□□ -0.13
C9orf3-201ENST00000277198 ZNF112Q9UJU3 913 aa14.24□□□□□ -0.13
C9orf3-201ENST00000277198 FAM184BQ9ULE4 1060 aa14.24□□□□□ -0.13
C9orf3-201ENST00000277198 TFR2Q9UP52 801 aa14.24□□□□□ -0.13
C9orf3-201ENST00000277198 HYOU1Q9Y4L1 999 aa14.24□□□□□ -0.13
C9orf3-201ENST00000277198 DUSP10Q9Y6W6 482 aa14.24□□□□□ -0.13
C9orf3-201ENST00000277198 MYH1P12882 1939 aa14.24□□□□□ -0.13
C9orf3-201ENST00000277198 SPDYE5A6NIY4 337 aa14.23□□□□□ -0.13
C9orf3-201ENST00000277198 IRF6O14896 467 aa14.23□□□□□ -0.13
C9orf3-201ENST00000277198 EDIL3O43854 480 aa14.23□□□□□ -0.13
C9orf3-201ENST00000277198 EIF4A3P38919 411 aaKnown RBP14.23□□□□□ -0.13
C9orf3-201ENST00000277198 RRP1BQ14684 758 aaKnown RBP14.23□□□□□ -0.13
C9orf3-201ENST00000277198 ZCWPW2Q504Y3 356 aa14.23□□□□□ -0.13
C9orf3-201ENST00000277198 PDXDC1Q6P996 788 aa14.23□□□□□ -0.13
C9orf3-201ENST00000277198 IFNL1Q8IU54 200 aa14.23□□□□□ -0.13
C9orf3-201ENST00000277198 EEF2KMTQ96G04 330 aa14.23□□□□□ -0.13
C9orf3-201ENST00000277198 CAPZA3Q96KX2 299 aa14.23□□□□□ -0.13
C9orf3-201ENST00000277198 FAM207AQ9NSI2 230 aaPredicted RBP14.23□□□□□ -0.13
C9orf3-201ENST00000277198 SAGE1Q9NXZ1 904 aa14.23□□□□□ -0.13
C9orf3-201ENST00000277198 PDE2AO00408 941 aaPredicted RBP14.23□□□□□ -0.13
C9orf3-201ENST00000277198 PRPF6O94906 941 aaKnown RBP14.23□□□□□ -0.13
C9orf3-201ENST00000277198 CLSTN1O94985 981 aa14.23□□□□□ -0.13
C9orf3-201ENST00000277198 TDP2O95551 362 aa14.23□□□□□ -0.13
C9orf3-201ENST00000277198 SYF2O95926 243 aaKnown RBP14.23□□□□□ -0.13
C9orf3-201ENST00000277198 MAGEA1P43355 309 aa14.23□□□□□ -0.13
C9orf3-201ENST00000277198 SLC20A2Q08357 652 aa14.23□□□□□ -0.13
C9orf3-201ENST00000277198 ZNF543Q08ER8 600 aa14.23□□□□□ -0.13
C9orf3-201ENST00000277198 RAD51AP2Q09MP3 1159 aa14.23□□□□□ -0.13
C9orf3-201ENST00000277198 SHROOM1Q2M3G4 852 aaPredicted RBP14.23□□□□□ -0.13
C9orf3-201ENST00000277198 GLE1Q53GS7 698 aaKnown RBP14.23□□□□□ -0.13
C9orf3-201ENST00000277198 BRI3BPQ8WY22 251 aa14.23□□□□□ -0.13
C9orf3-201ENST00000277198 CUL5Q93034 780 aa14.23□□□□□ -0.13
C9orf3-201ENST00000277198 HPS3Q969F9 1004 aa14.23□□□□□ -0.13
C9orf3-201ENST00000277198 CRACR2AQ9BSW2 395 aa14.23□□□□□ -0.13
C9orf3-201ENST00000277198 CEP72Q9P209 647 aa14.23□□□□□ -0.13
C9orf3-201ENST00000277198 COL4A3BPQ9Y5P4 624 aa14.23□□□□□ -0.13
C9orf3-201ENST00000277198 MANSC4A6NHS7 340 aaPredicted RBP14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms