RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 RXRBP28702 533 aa12.38□□□□□ -0.43
USP53-201ENST00000274030 TDRD3Q9H7E2 651 aaKnown RBP12.38□□□□□ -0.43
USP53-201ENST00000274030 NEDD4P46934 1319 aa12.38□□□□□ -0.43
USP53-201ENST00000274030 SMIM24O75264 130 aa12.38□□□□□ -0.43
USP53-201ENST00000274030 SERPING1P05155 500 aa12.38□□□□□ -0.43
USP53-201ENST00000274030 CYP2E1P05181 493 aaPredicted RBP12.38□□□□□ -0.43
USP53-201ENST00000274030 FAM133BQ5BKY9 247 aaKnown RBP12.38□□□□□ -0.43
USP53-201ENST00000274030 ZNF668Q96K58 619 aaPredicted RBP12.38□□□□□ -0.43
USP53-201ENST00000274030 THAP9Q9H5L6 903 aa12.38□□□□□ -0.43
USP53-201ENST00000274030 MRPL47Q9HD33 250 aaKnown RBP12.38□□□□□ -0.43
USP53-201ENST00000274030 ZFYVE16Q7Z3T8 1539 aa12.38□□□□□ -0.43
USP53-201ENST00000274030 PRPSAP2O60256 369 aa12.38□□□□□ -0.43
USP53-201ENST00000274030 TOM1L1O75674 476 aa12.38□□□□□ -0.43
USP53-201ENST00000274030 IGKV5-2P06315 115 aa12.38□□□□□ -0.43
USP53-201ENST00000274030 RPSAP08865 295 aaKnown RBP12.38□□□□□ -0.43
USP53-201ENST00000274030 MAP2K2P36507 400 aa12.38□□□□□ -0.43
USP53-201ENST00000274030 ALKBH5Q6P6C2 394 aaKnown RBP12.38□□□□□ -0.43
USP53-201ENST00000274030 BANK1Q8NDB2 785 aa12.38□□□□□ -0.43
USP53-201ENST00000274030 HSPH1Q92598 858 aa12.38□□□□□ -0.43
USP53-201ENST00000274030 CDHR1Q96JP9 859 aa12.38□□□□□ -0.43
USP53-201ENST00000274030 UBN1Q9NPG3 1134 aa12.38□□□□□ -0.43
USP53-201ENST00000274030 CPSF3Q9UKF6 684 aaKnown RBP12.38□□□□□ -0.43
USP53-201ENST00000274030 H7C1W4 665 aa12.38□□□□□ -0.43
USP53-201ENST00000274030 CYB5R4Q7L1T6 521 aa12.38□□□□□ -0.43
USP53-201ENST00000274030 PCGF5Q86SE9 256 aa12.38□□□□□ -0.43
USP53-201ENST00000274030 SIX6OS1Q8N1H7 587 aa12.38□□□□□ -0.43
USP53-201ENST00000274030 NOVA2Q9UNW9 492 aaKnown RBP12.38□□□□□ -0.43
USP53-201ENST00000274030 SPATA31E1Q6ZUB1 1445 aa12.37□□□□□ -0.43
USP53-201ENST00000274030 PALLDQ8WX93 1383 aa12.37□□□□□ -0.43
USP53-201ENST00000274030 CYP27B1O15528 508 aa12.37□□□□□ -0.43
USP53-201ENST00000274030 FAM83BQ5T0W9 1011 aa12.37□□□□□ -0.43
USP53-201ENST00000274030 CIAPIN1Q6FI81 312 aa12.37□□□□□ -0.43
USP53-201ENST00000274030 BBS5Q8N3I7 341 aa12.37□□□□□ -0.43
USP53-201ENST00000274030 OXER1Q8TDS5 423 aa12.37□□□□□ -0.43
USP53-201ENST00000274030 E2F5Q15329 346 aa12.37□□□□□ -0.43
USP53-201ENST00000274030 RNF207Q6ZRF8 634 aa12.37□□□□□ -0.43
USP53-201ENST00000274030 TMC4Q7Z404 712 aa12.37□□□□□ -0.43
USP53-201ENST00000274030 SEPT12Q8IYM1 358 aa12.37□□□□□ -0.43
USP53-201ENST00000274030 MB21D1Q8N884 522 aa12.37□□□□□ -0.43
USP53-201ENST00000274030 PPWD1Q96BP3 646 aaKnown RBP12.37□□□□□ -0.43
USP53-201ENST00000274030 LRGUKQ96M69 825 aa12.37□□□□□ -0.43
USP53-201ENST00000274030 NGRNQ9NPE2 291 aaKnown RBP12.37□□□□□ -0.43
USP53-201ENST00000274030 JRKLQ9Y4A0 524 aa12.37□□□□□ -0.43
USP53-201ENST00000274030 TYW5A2RUC4 315 aaKnown RBP12.37□□□□□ -0.43
USP53-201ENST00000274030 ACSL3O95573 720 aa12.37□□□□□ -0.43
USP53-201ENST00000274030 MT-ND3P03897 115 aa12.37□□□□□ -0.43
USP53-201ENST00000274030 S100BP04271 92 aaPredicted RBP12.37□□□□□ -0.43
USP53-201ENST00000274030 TOB2Q14106 344 aaPredicted RBP12.37□□□□□ -0.43
USP53-201ENST00000274030 IQCB1Q15051 598 aa12.37□□□□□ -0.43
USP53-201ENST00000274030 DACT3Q96B18 629 aaPredicted RBP12.37□□□□□ -0.43
USP53-201ENST00000274030 THOC1Q96FV9 657 aaKnown RBP12.37□□□□□ -0.43
USP53-201ENST00000274030 APBA1Q02410 837 aa12.37□□□□□ -0.43
USP53-201ENST00000274030 MYO1EQ12965 1108 aa12.37□□□□□ -0.43
USP53-201ENST00000274030 NNTQ13423 1086 aa12.37□□□□□ -0.43
USP53-201ENST00000274030 PASD1Q8IV76 773 aa12.37□□□□□ -0.43
USP53-201ENST00000274030 RPF1Q9H9Y2 349 aaKnown RBP12.37□□□□□ -0.43
USP53-201ENST00000274030 ZNF521Q96K83 1311 aa12.37□□□□□ -0.43
USP53-201ENST00000274030 SRGAP2BP0DMP2 458 aa12.36□□□□□ -0.43
USP53-201ENST00000274030 COG7P83436 770 aa12.36□□□□□ -0.43
USP53-201ENST00000274030 ARMC9Q7Z3E5 817 aa12.36□□□□□ -0.43
USP53-201ENST00000274030 EXOC8Q8IYI6 725 aa12.36□□□□□ -0.43
USP53-201ENST00000274030 hCG_1984214I3L0E3 225 aa12.36□□□□□ -0.43
USP53-201ENST00000274030 MED7O43513 233 aa12.36□□□□□ -0.43
USP53-201ENST00000274030 SRGAP2O75044 1071 aa12.36□□□□□ -0.43
USP53-201ENST00000274030 PPP6R3Q5H9R7 873 aaPredicted RBP12.36□□□□□ -0.43
USP53-201ENST00000274030 ZNF713Q8N859 430 aaPredicted RBP12.36□□□□□ -0.43
USP53-201ENST00000274030 OR6B3Q8NGW1 331 aa12.36□□□□□ -0.43
USP53-201ENST00000274030 ABCA5Q8WWZ7 1642 aa12.36□□□□□ -0.43
USP53-201ENST00000274030 EXOC1LA0A1B0GW35 172 aa12.36□□□□□ -0.43
USP53-201ENST00000274030 SPOPLQ6IQ16 392 aa12.36□□□□□ -0.43
USP53-201ENST00000274030 TMTC3Q6ZXV5 915 aa12.36□□□□□ -0.43
USP53-201ENST00000274030 TMEM47Q9BQJ4 181 aa12.36□□□□□ -0.43
USP53-201ENST00000274030 RAVER2Q9HCJ3 691 aaKnown RBP12.36□□□□□ -0.43
USP53-201ENST00000274030 TLK1Q9UKI8 766 aa12.36□□□□□ -0.43
USP53-201ENST00000274030 PCDHA6Q9UN73 950 aa12.36□□□□□ -0.43
USP53-201ENST00000274030 PCDHA8Q9Y5H6 950 aa12.36□□□□□ -0.43
USP53-201ENST00000274030 SPECC1L-ADORA2AF8WAN1 911 aa12.36□□□□□ -0.43
USP53-201ENST00000274030 DR1Q01658 176 aa12.36□□□□□ -0.43
USP53-201ENST00000274030 THOC5Q13769 683 aaKnown RBP12.36□□□□□ -0.43
USP53-201ENST00000274030 DALRD3Q5D0E6 543 aaKnown RBP12.36□□□□□ -0.43
USP53-201ENST00000274030 GINM1Q9NU53 330 aa12.36□□□□□ -0.43
USP53-201ENST00000274030 TMEM260Q9NX78 707 aa12.36□□□□□ -0.43
USP53-201ENST00000274030 NFU1Q9UMS0 254 aa12.36□□□□□ -0.43
USP53-201ENST00000274030 PHLPP2Q6ZVD8 1323 aa12.36□□□□□ -0.43
USP53-201ENST00000274030 NLRP1Q9C000 1473 aa12.36□□□□□ -0.43
USP53-201ENST00000274030 ARAP3Q8WWN8 1544 aa12.36□□□□□ -0.43
USP53-201ENST00000274030 E9PMD0 336 aa12.36□□□□□ -0.43
USP53-201ENST00000274030 MYL1P05976 194 aa12.36□□□□□ -0.43
USP53-201ENST00000274030 NPR1P16066 1061 aa12.36□□□□□ -0.43
USP53-201ENST00000274030 PEX19P40855 299 aa12.36□□□□□ -0.43
USP53-201ENST00000274030 HEMGNQ9BXL5 484 aa12.36□□□□□ -0.43
USP53-201ENST00000274030 COA1Q9GZY4 146 aa12.36□□□□□ -0.43
USP53-201ENST00000274030 PLEKHG1Q9ULL1 1385 aa12.36□□□□□ -0.43
USP53-201ENST00000274030 ZNF233A6NK53 670 aa12.35□□□□□ -0.43
USP53-201ENST00000274030 FGGP02679 453 aa12.35□□□□□ -0.43
USP53-201ENST00000274030 CRKP46108 304 aa12.35□□□□□ -0.43
USP53-201ENST00000274030 PSMD2Q13200 908 aa12.35□□□□□ -0.43
USP53-201ENST00000274030 FOXP4Q8IVH2 680 aaPredicted RBP12.35□□□□□ -0.43
USP53-201ENST00000274030 SEPT2Q15019 361 aa12.35□□□□□ -0.43
USP53-201ENST00000274030 RAB44Q7Z6P3 723 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms