RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 METTL23Q86XA0 190 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 CCDC60Q8IWA6 550 aaPredicted RBP16.9■□□□□ 0.3
UBR3-201ENST00000272793 GTF2A1LQ9UNN4 478 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 SERPIND1P05546 499 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 MYL1P05976 194 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 HSD3B2P26439 372 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 TADA1Q96BN2 335 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 TEX13AQ9BXU3 409 aaPredicted RBP16.9■□□□□ 0.3
UBR3-201ENST00000272793 FLT3P36888 993 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 RARS2Q5T160 578 aaKnown RBP16.9■□□□□ 0.3
UBR3-201ENST00000272793 C11orf74Q86VG3 221 aa16.9■□□□□ 0.3
UBR3-201ENST00000272793 ENO4A6NNW6 628 aa16.89■□□□□ 0.29
UBR3-201ENST00000272793 GOLGA8MH3BSY2 632 aa16.89■□□□□ 0.29
UBR3-201ENST00000272793 CXCR5P32302 372 aa16.89■□□□□ 0.29
UBR3-201ENST00000272793 FAM167BQ9BTA0 163 aa16.89■□□□□ 0.29
UBR3-201ENST00000272793 ZNF394Q53GI3 561 aa16.89■□□□□ 0.29
UBR3-201ENST00000272793 RNF139Q8WU17 664 aa16.89■□□□□ 0.29
UBR3-201ENST00000272793 OLFM3Q96PB7 478 aa16.89■□□□□ 0.29
UBR3-201ENST00000272793 FSD1LQ9BXM9 530 aa16.89■□□□□ 0.29
UBR3-201ENST00000272793 PANK4Q9NVE7 773 aa16.89■□□□□ 0.29
UBR3-201ENST00000272793 C18orf25Q96B23 403 aaPredicted RBP16.89■□□□□ 0.29
UBR3-201ENST00000272793 PKD2L2Q9NZM6 624 aa16.89■□□□□ 0.29
UBR3-201ENST00000272793 NIP7Q9Y221 180 aaKnown RBP eCLIP16.89■□□□□ 0.29
UBR3-201ENST00000272793 PPP2R2CQ9Y2T4 447 aa16.89■□□□□ 0.29
UBR3-201ENST00000272793 MAPK4P31152 587 aa16.89■□□□□ 0.29
UBR3-201ENST00000272793 PHKA1P46020 1223 aa16.89■□□□□ 0.29
UBR3-201ENST00000272793 TTLL7Q6ZT98 887 aa16.89■□□□□ 0.29
UBR3-201ENST00000272793 C1orf131Q8NDD1 294 aaKnown RBP16.89■□□□□ 0.29
UBR3-201ENST00000272793 CCDC88CQ9P219 2028 aa16.89■□□□□ 0.29
UBR3-201ENST00000272793 LINC00854A0A1B0GVQ3 168 aa16.89■□□□□ 0.29
UBR3-201ENST00000272793 RASSF9O75901 435 aa16.89■□□□□ 0.29
UBR3-201ENST00000272793 EHHADHQ08426 723 aa16.89■□□□□ 0.29
UBR3-201ENST00000272793 CBFBQ13951 182 aa16.89■□□□□ 0.29
UBR3-201ENST00000272793 ARL13BQ3SXY8 428 aa16.89■□□□□ 0.29
UBR3-201ENST00000272793 FAM149B1Q96BN6 582 aa16.89■□□□□ 0.29
UBR3-201ENST00000272793 FOXO3O43524 673 aa16.89■□□□□ 0.29
UBR3-201ENST00000272793 APPL2Q8NEU8 664 aa16.89■□□□□ 0.29
UBR3-201ENST00000272793 EPB41L5Q9HCM4 733 aa16.89■□□□□ 0.29
UBR3-201ENST00000272793 LRRIQ4A6NIV6 560 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 SNRPA1P09661 255 aaKnown RBP16.88■□□□□ 0.29
UBR3-201ENST00000272793 ATL3Q6DD88 541 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 C7orf31Q8N865 590 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 MDM1Q8TC05 714 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 FAM129BQ96TA1 746 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 REXO4Q9GZR2 422 aaKnown RBP16.88■□□□□ 0.29
UBR3-201ENST00000272793 SUGCTQ9HAC7 445 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 KCNJ14Q9UNX9 436 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 CCDC195A0A1B0GUA6 201 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 SYNCRIPO60506 623 aaKnown RBP16.88■□□□□ 0.29
UBR3-201ENST00000272793 EIF2S1P05198 315 aaKnown RBP16.88■□□□□ 0.29
UBR3-201ENST00000272793 RASSF7Q02833 373 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 PUDPQ08623 228 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 TCP10Q12799 353 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 PKN3Q6P5Z2 889 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 TTC17Q96AE7 1141 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 CUTAO60888 179 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 DNAJC3Q13217 504 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 TMEM154Q6P9G4 183 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 SUPT20HQ8NEM7 779 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 PYROXD1Q8WU10 500 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 HSPH1Q92598 858 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 CCDC127Q96BQ5 260 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 SLC5A4Q9NY91 659 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 PEX1O43933 1283 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 MBD4O95243 580 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 ANKRD36BP1Q96IX9 119 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.88■□□□□ 0.29
UBR3-201ENST00000272793 ZNF233A6NK53 670 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 C16orf96A6NNT2 1141 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 KCNJ18B7U540 433 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 NDUFB5O43674 189 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 CHMLP26374 656 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 MYO1EQ12965 1108 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 KCNJ12Q14500 433 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 THEMIS2Q5TEJ8 643 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 EXD1Q8NHP7 514 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 RERGLQ9H628 205 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 INTS13Q9NVM9 706 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 PCDHGB4Q9UN71 923 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 TNNQ9UQP3 1299 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 AKT3Q9Y243 479 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 MYO1FO00160 1098 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 CLK1P49759 484 aaKnown RBP16.88■□□□□ 0.29
UBR3-201ENST00000272793 TP53BP2Q13625 1128 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 CNGA2Q16280 664 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 CYP4F11Q9HBI6 524 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 LRFN2Q9ULH4 789 aa16.88■□□□□ 0.29
UBR3-201ENST00000272793 DEXIO95424 95 aa16.87■□□□□ 0.29
UBR3-201ENST00000272793 TMPRSS15P98073 1019 aa16.87■□□□□ 0.29
UBR3-201ENST00000272793 SPDYAQ5MJ70 313 aa16.87■□□□□ 0.29
UBR3-201ENST00000272793 FAM32AQ9Y421 112 aaKnown RBP16.87■□□□□ 0.29
UBR3-201ENST00000272793 ALFQ53S48 1182 aa16.87■□□□□ 0.29
UBR3-201ENST00000272793 TEDDM1Q5T9Z0 273 aa16.87■□□□□ 0.29
UBR3-201ENST00000272793 TMC5Q6UXY8 1006 aa16.87■□□□□ 0.29
UBR3-201ENST00000272793 LRRC8AQ8IWT6 810 aa16.87■□□□□ 0.29
UBR3-201ENST00000272793 ANKRD13CQ8N6S4 541 aa16.87■□□□□ 0.29
UBR3-201ENST00000272793 ANKRD44Q8N8A2 993 aa16.87■□□□□ 0.29
UBR3-201ENST00000272793 SPDYE5A6NIY4 337 aa16.87■□□□□ 0.29
UBR3-201ENST00000272793 SPDYE7PQ495Y7 208 aa16.87■□□□□ 0.29
UBR3-201ENST00000272793 CLEC4FQ8N1N0 589 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms