RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 EPHA7Q15375 998 aa13.93□□□□□ -0.18
CAPN9-201ENST00000271971 ANKRD23Q86SG2 305 aa13.93□□□□□ -0.18
CAPN9-201ENST00000271971 NLRX1Q86UT6 975 aa13.93□□□□□ -0.18
CAPN9-201ENST00000271971 GLIS3Q8NEA6 775 aa13.93□□□□□ -0.18
CAPN9-201ENST00000271971 ENOX1Q8TC92 643 aaKnown RBP13.93□□□□□ -0.18
CAPN9-201ENST00000271971 NELFBQ8WX92 580 aa13.93□□□□□ -0.18
CAPN9-201ENST00000271971 FGD4Q96M96 766 aa13.93□□□□□ -0.18
CAPN9-201ENST00000271971 MMP19Q99542 508 aa13.93□□□□□ -0.18
CAPN9-201ENST00000271971 TUFT1Q9NNX1 390 aa13.93□□□□□ -0.18
CAPN9-201ENST00000271971 SLC39A2Q9NP94 309 aa13.93□□□□□ -0.18
CAPN9-201ENST00000271971 STK24Q9Y6E0 443 aa13.93□□□□□ -0.18
CAPN9-201ENST00000271971 KCNA2P16389 499 aa13.93□□□□□ -0.18
CAPN9-201ENST00000271971 PAK1Q13153 545 aa13.93□□□□□ -0.18
CAPN9-201ENST00000271971 EEPD1Q7L9B9 569 aa13.93□□□□□ -0.18
CAPN9-201ENST00000271971 ADSSL1Q8N142 457 aa13.93□□□□□ -0.18
CAPN9-201ENST00000271971 RUSC1Q9BVN2 902 aa13.93□□□□□ -0.18
CAPN9-201ENST00000271971 POLD4Q9HCU8 107 aa13.93□□□□□ -0.18
CAPN9-201ENST00000271971 TBC1D22BQ9NU19 505 aa13.93□□□□□ -0.18
CAPN9-201ENST00000271971 KRT18P05783 430 aaKnown RBP13.92□□□□□ -0.18
CAPN9-201ENST00000271971 PMS1P54277 932 aaKnown RBP13.92□□□□□ -0.18
CAPN9-201ENST00000271971 COASYQ13057 564 aa13.92□□□□□ -0.18
CAPN9-201ENST00000271971 KCTD2Q14681 263 aa13.92□□□□□ -0.18
CAPN9-201ENST00000271971 STXBP2Q15833 593 aa13.92□□□□□ -0.18
CAPN9-201ENST00000271971 UGCGQ16739 394 aa13.92□□□□□ -0.18
CAPN9-201ENST00000271971 SEPT14Q6ZU15 432 aa13.92□□□□□ -0.18
CAPN9-201ENST00000271971 SAPCD2Q86UD0 394 aa13.92□□□□□ -0.18
CAPN9-201ENST00000271971 SYT2Q8N9I0 419 aaPredicted RBP13.92□□□□□ -0.18
CAPN9-201ENST00000271971 GPRC5AQ8NFJ5 357 aa13.92□□□□□ -0.18
CAPN9-201ENST00000271971 CCDC47Q96A33 483 aaKnown RBP13.92□□□□□ -0.18
CAPN9-201ENST00000271971 IWS1Q96ST2 819 aa13.92□□□□□ -0.18
CAPN9-201ENST00000271971 TBC1D7Q9P0N9 293 aa13.92□□□□□ -0.18
CAPN9-201ENST00000271971 IFNKQ9P0W0 207 aa13.92□□□□□ -0.18
CAPN9-201ENST00000271971 SLC45A1Q9Y2W3 748 aa13.92□□□□□ -0.18
CAPN9-201ENST00000271971 MYH9P35579 1960 aaKnown RBP13.92□□□□□ -0.18
CAPN9-201ENST00000271971 ECM2O94769 699 aaPredicted RBP13.91□□□□□ -0.18
CAPN9-201ENST00000271971 EYA4O95677 639 aa13.91□□□□□ -0.18
CAPN9-201ENST00000271971 SP2Q02086 613 aa13.91□□□□□ -0.18
CAPN9-201ENST00000271971 CNNM4Q6P4Q7 775 aa13.91□□□□□ -0.18
CAPN9-201ENST00000271971 TRMT1LQ7Z2T5 733 aaKnown RBP13.91□□□□□ -0.18
CAPN9-201ENST00000271971 REEP2Q9BRK0 252 aa13.91□□□□□ -0.18
CAPN9-201ENST00000271971 FGFBP2Q9BYJ0 223 aa13.91□□□□□ -0.18
CAPN9-201ENST00000271971 LRRC27Q9C0I9 530 aa13.91□□□□□ -0.18
CAPN9-201ENST00000271971 MAF1Q9H063 256 aa13.91□□□□□ -0.18
CAPN9-201ENST00000271971 ZHX3Q9H4I2 956 aa13.91□□□□□ -0.18
CAPN9-201ENST00000271971 GPBP1L1Q9HC44 474 aaPredicted RBP13.91□□□□□ -0.18
CAPN9-201ENST00000271971 PANK4Q9NVE7 773 aa13.91□□□□□ -0.18
CAPN9-201ENST00000271971 PASKQ96RG2 1323 aa13.91□□□□□ -0.18
CAPN9-201ENST00000271971 CENPFP49454 3210 aa13.91□□□□□ -0.18
CAPN9-201ENST00000271971 PVALEFA0A1B0GWK0 134 aa13.91□□□□□ -0.18
CAPN9-201ENST00000271971 FANCCQ00597 558 aa13.91□□□□□ -0.18
CAPN9-201ENST00000271971 EHHADHQ08426 723 aa13.91□□□□□ -0.18
CAPN9-201ENST00000271971 GNPTABQ3T906 1256 aa13.91□□□□□ -0.18
CAPN9-201ENST00000271971 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.91□□□□□ -0.18
CAPN9-201ENST00000271971 XPO4Q9C0E2 1151 aaKnown RBP13.91□□□□□ -0.18
CAPN9-201ENST00000271971 MROH8Q9H579 483 aa13.91□□□□□ -0.18
CAPN9-201ENST00000271971 ADD3Q9UEY8 706 aaKnown RBP13.91□□□□□ -0.18
CAPN9-201ENST00000271971 TCEAL9Q9UHQ7 104 aa13.91□□□□□ -0.18
CAPN9-201ENST00000271971 DOCK3Q8IZD9 2030 aa13.91□□□□□ -0.18
CAPN9-201ENST00000271971 TMEM150BA6NC51 233 aa13.9□□□□□ -0.18
CAPN9-201ENST00000271971 RSPH10B2B2RC85 870 aa13.9□□□□□ -0.18
CAPN9-201ENST00000271971 IGF2BP3O00425 579 aaKnown RBP eCLIP13.9□□□□□ -0.18
CAPN9-201ENST00000271971 EIF3JO75822 258 aaKnown RBP13.9□□□□□ -0.18
CAPN9-201ENST00000271971 RSPH10BP0C881 870 aa13.9□□□□□ -0.18
CAPN9-201ENST00000271971 ZNF18P17022 549 aa13.9□□□□□ -0.18
CAPN9-201ENST00000271971 EDNRBP24530 442 aa13.9□□□□□ -0.18
CAPN9-201ENST00000271971 COPB2P35606 906 aa13.9□□□□□ -0.18
CAPN9-201ENST00000271971 LRRC41Q15345 812 aa13.9□□□□□ -0.18
CAPN9-201ENST00000271971 PTPN21Q16825 1174 aa13.9□□□□□ -0.18
CAPN9-201ENST00000271971 SPATA1Q5VX52 437 aa13.9□□□□□ -0.18
CAPN9-201ENST00000271971 PARK7Q99497 189 aaKnown RBP13.9□□□□□ -0.18
CAPN9-201ENST00000271971 SH2D3AQ9BRG2 576 aa13.9□□□□□ -0.18
CAPN9-201ENST00000271971 BMP2KQ9NSY1 1161 aaPredicted RBP13.9□□□□□ -0.18
CAPN9-201ENST00000271971 RWDD2AQ9UIY3 292 aa13.9□□□□□ -0.18
CAPN9-201ENST00000271971 PAXBP1Q9Y5B6 917 aa13.9□□□□□ -0.18
CAPN9-201ENST00000271971 ARID2Q68CP9 1835 aa13.9□□□□□ -0.18
CAPN9-201ENST00000271971 DNAJC25-GNG10A0A024R161 153 aa13.9□□□□□ -0.18
CAPN9-201ENST00000271971 WDR64B1ANS9 1081 aa13.9□□□□□ -0.18
CAPN9-201ENST00000271971 SPATA31C2B4DYI2 1134 aa13.9□□□□□ -0.18
CAPN9-201ENST00000271971 STAM2O75886 525 aa13.9□□□□□ -0.18
CAPN9-201ENST00000271971 KRT76Q01546 638 aa13.9□□□□□ -0.18
CAPN9-201ENST00000271971 GIT2Q14161 759 aa13.9□□□□□ -0.18
CAPN9-201ENST00000271971 DRC7Q8IY82 874 aa13.9□□□□□ -0.18
CAPN9-201ENST00000271971 GTF3C2Q8WUA4 911 aaPredicted RBP13.9□□□□□ -0.18
CAPN9-201ENST00000271971 JPH1Q9HDC5 661 aaPredicted RBP13.9□□□□□ -0.18
CAPN9-201ENST00000271971 CGNQ9P2M7 1197 aaKnown RBP13.9□□□□□ -0.18
CAPN9-201ENST00000271971 PSMA7O14818 248 aa13.89□□□□□ -0.19
CAPN9-201ENST00000271971 SERPINC1P01008 464 aa13.89□□□□□ -0.19
CAPN9-201ENST00000271971 P4HBP07237 508 aaKnown RBP13.89□□□□□ -0.19
CAPN9-201ENST00000271971 STIM1Q13586 685 aa13.89□□□□□ -0.19
CAPN9-201ENST00000271971 CT47A1Q5JQC4 288 aaPredicted RBP13.89□□□□□ -0.19
CAPN9-201ENST00000271971 RINT1Q6NUQ1 792 aa13.89□□□□□ -0.19
CAPN9-201ENST00000271971 RGMBQ6NW40 437 aa13.89□□□□□ -0.19
CAPN9-201ENST00000271971 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.89□□□□□ -0.19
CAPN9-201ENST00000271971 SHCBP1Q8NEM2 672 aa13.89□□□□□ -0.19
CAPN9-201ENST00000271971 NEK9Q8TD19 979 aa13.89□□□□□ -0.19
CAPN9-201ENST00000271971 EEF2KMTQ96G04 330 aa13.89□□□□□ -0.19
CAPN9-201ENST00000271971 KIF3CO14782 793 aa13.89□□□□□ -0.19
CAPN9-201ENST00000271971 MAFGO15525 162 aa13.89□□□□□ -0.19
CAPN9-201ENST00000271971 QARSP47897 775 aaKnown RBP13.89□□□□□ -0.19
CAPN9-201ENST00000271971 JAK3P52333 1124 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms