RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 PASKQ96RG2 1323 aa13.09□□□□□ -0.31
ERBB2-201ENST00000269571 USP17L3A6NCW0 530 aa13.09□□□□□ -0.31
ERBB2-201ENST00000269571 USP17L4A6NCW7 530 aa13.09□□□□□ -0.31
ERBB2-201ENST00000269571 PPP2R2AP63151 447 aa13.09□□□□□ -0.31
ERBB2-201ENST00000269571 PPP2R5EQ16537 467 aa13.09□□□□□ -0.31
ERBB2-201ENST00000269571 DOK7Q18PE1 504 aa13.09□□□□□ -0.31
ERBB2-201ENST00000269571 USP17L1Q7RTZ2 530 aa13.09□□□□□ -0.31
ERBB2-201ENST00000269571 DDX42Q86XP3 938 aaKnown RBP eCLIP13.09□□□□□ -0.31
ERBB2-201ENST00000269571 ARL8AQ96BM9 186 aa13.09□□□□□ -0.31
ERBB2-201ENST00000269571 DDX23Q9BUQ8 820 aaKnown RBP13.09□□□□□ -0.31
ERBB2-201ENST00000269571 GLT8D2Q9H1C3 349 aa13.09□□□□□ -0.31
ERBB2-201ENST00000269571 EHD4Q9H223 541 aa13.09□□□□□ -0.31
ERBB2-201ENST00000269571 USP17L8P0C7I0 530 aa13.08□□□□□ -0.32
ERBB2-201ENST00000269571 ATF2P15336 505 aa13.08□□□□□ -0.32
ERBB2-201ENST00000269571 KLK7P49862 253 aa13.08□□□□□ -0.32
ERBB2-201ENST00000269571 ANTXR2P58335 489 aa13.08□□□□□ -0.32
ERBB2-201ENST00000269571 CYB5D1Q6P9G0 228 aa13.08□□□□□ -0.32
ERBB2-201ENST00000269571 LARGE2Q8N3Y3 721 aa13.08□□□□□ -0.32
ERBB2-201ENST00000269571 P3H4Q92791 437 aa13.08□□□□□ -0.32
ERBB2-201ENST00000269571 ZIM3Q96PE6 472 aa13.08□□□□□ -0.32
ERBB2-201ENST00000269571 RBM12Q9NTZ6 932 aaKnown RBP13.08□□□□□ -0.32
ERBB2-201ENST00000269571 ZNF148Q9UQR1 794 aa13.08□□□□□ -0.32
ERBB2-201ENST00000269571 PALLDQ8WX93 1383 aa13.08□□□□□ -0.32
ERBB2-201ENST00000269571 AGLP35573 1532 aa13.08□□□□□ -0.32
ERBB2-201ENST00000269571 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.08□□□□□ -0.32
ERBB2-201ENST00000269571 NBPF26B4DH59 902 aa13.08□□□□□ -0.32
ERBB2-201ENST00000269571 NBPF15Q8N660 670 aa13.08□□□□□ -0.32
ERBB2-201ENST00000269571 SH2D4AQ9H788 454 aa13.08□□□□□ -0.32
ERBB2-201ENST00000269571 CNOT10Q9H9A5 744 aaKnown RBP13.08□□□□□ -0.32
ERBB2-201ENST00000269571 MYO3AQ8NEV4 1616 aa13.08□□□□□ -0.32
ERBB2-201ENST00000269571 MDH1P40925 334 aaKnown RBP13.08□□□□□ -0.32
ERBB2-201ENST00000269571 BTDP43251 543 aa13.08□□□□□ -0.32
ERBB2-201ENST00000269571 GRM1Q13255 1194 aa13.08□□□□□ -0.32
ERBB2-201ENST00000269571 TMCO4Q5TGY1 634 aa13.08□□□□□ -0.32
ERBB2-201ENST00000269571 ARMCX6Q7L4S7 300 aa13.08□□□□□ -0.32
ERBB2-201ENST00000269571 PDCD7Q8N8D1 485 aaKnown RBP13.08□□□□□ -0.32
ERBB2-201ENST00000269571 B4GALNT2Q8NHY0 566 aa13.08□□□□□ -0.32
ERBB2-201ENST00000269571 PIGSQ96S52 555 aa13.08□□□□□ -0.32
ERBB2-201ENST00000269571 SALL3Q9BXA9 1300 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 USP42Q9H9J4 1324 aaKnown RBP13.07□□□□□ -0.32
ERBB2-201ENST00000269571 I3L4J1 428 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 STXBP3O00186 592 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 IL9RQ01113 521 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 MKRN4PQ13434 485 aaPredicted RBP13.07□□□□□ -0.32
ERBB2-201ENST00000269571 EZH2Q15910 746 aaKnown RBP13.07□□□□□ -0.32
ERBB2-201ENST00000269571 SMIM5Q71RC9 77 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 SEPT12Q8IYM1 358 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 PBKQ96KB5 322 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.07□□□□□ -0.32
ERBB2-201ENST00000269571 PPP1R9AQ9ULJ8 1098 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 OVOS2A0A0J9YW53 1432 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 OVOS2Q6IE36 1432 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 POTEMA6NI47 508 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 GAS7O60861 476 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 CYP2D6P10635 497 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 ERVK-24P63145 666 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.07□□□□□ -0.32
ERBB2-201ENST00000269571 FAM178BQ8IXR5 827 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 FBXO41Q8TF61 875 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 RNPC3Q96LT9 517 aaKnown RBP13.07□□□□□ -0.32
ERBB2-201ENST00000269571 MAK16Q9BXY0 300 aaKnown RBP13.07□□□□□ -0.32
ERBB2-201ENST00000269571 GOLPH3Q9H4A6 298 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 AZI2Q9H6S1 392 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 ANKZF1Q9H8Y5 726 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 DMGDHQ9UI17 866 aaKnown RBP13.07□□□□□ -0.32
ERBB2-201ENST00000269571 KCNG1Q9UIX4 513 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 ANAPC4Q9UJX5 808 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 RABGAP1Q9Y3P9 1069 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 CRB1P82279 1406 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 FERP16591 822 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 FAM83BQ5T0W9 1011 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 LIN9Q5TKA1 542 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 BSPRYQ5W0U4 402 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 PALM2Q8IXS6 379 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 EPN3Q9H201 632 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 PAPOLBQ9NRJ5 636 aaKnown RBP13.07□□□□□ -0.32
ERBB2-201ENST00000269571 ATP8A2Q9NTI2 1148 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 GCNT4Q9P109 453 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 AFPP02771 609 aaKnown RBP13.07□□□□□ -0.32
ERBB2-201ENST00000269571 CD19P15391 556 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 SLC16A2P36021 539 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 CUL1Q13616 776 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 ENAHQ8N8S7 591 aaPredicted RBP13.07□□□□□ -0.32
ERBB2-201ENST00000269571 RUNDC3BQ96NL0 473 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 EMILIN3Q9NT22 766 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 CAPN11Q9UMQ6 739 aa13.07□□□□□ -0.32
ERBB2-201ENST00000269571 ZNF804BA4D1E1 1349 aa13.06□□□□□ -0.32
ERBB2-201ENST00000269571 TARSL2A2RTX5 802 aaKnown RBP13.06□□□□□ -0.32
ERBB2-201ENST00000269571 MSH2P43246 934 aa13.06□□□□□ -0.32
ERBB2-201ENST00000269571 TXNRD1Q16881 649 aa13.06□□□□□ -0.32
ERBB2-201ENST00000269571 GLE1Q53GS7 698 aaKnown RBP13.06□□□□□ -0.32
ERBB2-201ENST00000269571 ANKRD40Q6AI12 368 aa13.06□□□□□ -0.32
ERBB2-201ENST00000269571 MIER3Q7Z3K6 550 aa13.06□□□□□ -0.32
ERBB2-201ENST00000269571 CUEDC2Q9H467 287 aa13.06□□□□□ -0.32
ERBB2-201ENST00000269571 ADGRB1O14514 1584 aa13.06□□□□□ -0.32
ERBB2-201ENST00000269571 PRPF6O94906 941 aaKnown RBP13.06□□□□□ -0.32
ERBB2-201ENST00000269571 HSP90AA5PQ58FG0 334 aa13.06□□□□□ -0.32
ERBB2-201ENST00000269571 GSDMBQ8TAX9 411 aa13.06□□□□□ -0.32
ERBB2-201ENST00000269571 TEKT1Q969V4 418 aa13.06□□□□□ -0.32
ERBB2-201ENST00000269571 TAF1DQ9H5J8 278 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms