RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 RPS8P62241 208 aaKnown RBP13.55□□□□□ -0.24
CDH11-201ENST00000268603 HDAC1Q13547 482 aaPredicted RBP13.55□□□□□ -0.24
CDH11-201ENST00000268603 HIPK4Q8NE63 616 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 TRIM11Q96F44 468 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 VPS39Q96JC1 886 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 SPZ1Q9BXG8 430 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 CBX8Q9HC52 389 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 COPRSQ9NQ92 184 aa13.55□□□□□ -0.24
CDH11-201ENST00000268603 ARHGAP10A1A4S6 786 aa13.54□□□□□ -0.24
CDH11-201ENST00000268603 PPEF1O14829 653 aaPredicted RBP13.54□□□□□ -0.24
CDH11-201ENST00000268603 RASSF7Q02833 373 aa13.54□□□□□ -0.24
CDH11-201ENST00000268603 PPP2R5BQ15173 497 aa13.54□□□□□ -0.24
CDH11-201ENST00000268603 SLC10A5Q5PT55 438 aa13.54□□□□□ -0.24
CDH11-201ENST00000268603 FAM173BQ6P4H8 233 aa13.54□□□□□ -0.24
CDH11-201ENST00000268603 TCP11Q8WWU5 503 aa13.54□□□□□ -0.24
CDH11-201ENST00000268603 ING2Q9H160 280 aa13.54□□□□□ -0.24
CDH11-201ENST00000268603 TNNQ9UQP3 1299 aa13.54□□□□□ -0.24
CDH11-201ENST00000268603 SBNO1A3KN83 1393 aa13.54□□□□□ -0.24
CDH11-201ENST00000268603 ZBED1O96006 694 aa13.54□□□□□ -0.24
CDH11-201ENST00000268603 PLS3P13797 630 aa13.54□□□□□ -0.24
CDH11-201ENST00000268603 TSPY1Q01534 308 aa13.54□□□□□ -0.24
CDH11-201ENST00000268603 KRT24Q2M2I5 525 aa13.54□□□□□ -0.24
CDH11-201ENST00000268603 PEG3Q9GZU2 1588 aa13.54□□□□□ -0.24
CDH11-201ENST00000268603 KRT4P19013 534 aa13.54□□□□□ -0.24
CDH11-201ENST00000268603 GYG1P46976 350 aa13.54□□□□□ -0.24
CDH11-201ENST00000268603 EHHADHQ08426 723 aa13.54□□□□□ -0.24
CDH11-201ENST00000268603 ST13P4Q8IZP2 240 aaPredicted RBP13.54□□□□□ -0.24
CDH11-201ENST00000268603 CYTH2Q99418 400 aa13.54□□□□□ -0.24
CDH11-201ENST00000268603 F5H423 210 aaPredicted RBP13.54□□□□□ -0.24
CDH11-201ENST00000268603 NDUFB5O43674 189 aa13.54□□□□□ -0.24
CDH11-201ENST00000268603 CUL1Q13616 776 aa13.54□□□□□ -0.24
CDH11-201ENST00000268603 GRAMD1BQ3KR37 738 aa13.54□□□□□ -0.24
CDH11-201ENST00000268603 MEI1Q5TIA1 1274 aa13.54□□□□□ -0.24
CDH11-201ENST00000268603 CATSPER4Q7RTX7 472 aa13.54□□□□□ -0.24
CDH11-201ENST00000268603 KIAA2013Q8IYS2 634 aa13.54□□□□□ -0.24
CDH11-201ENST00000268603 C17orf53Q8N3J3 647 aaPredicted RBP13.54□□□□□ -0.24
CDH11-201ENST00000268603 ASPSCR1Q9BZE9 553 aa13.54□□□□□ -0.24
CDH11-201ENST00000268603 SNX5Q9Y5X3 404 aa13.54□□□□□ -0.24
CDH11-201ENST00000268603 GUCA1CO95843 209 aa13.54□□□□□ -0.24
CDH11-201ENST00000268603 SLC9A1P19634 815 aa13.54□□□□□ -0.24
CDH11-201ENST00000268603 CLIC2O15247 247 aa13.53□□□□□ -0.24
CDH11-201ENST00000268603 IFT88Q13099 833 aa13.53□□□□□ -0.24
CDH11-201ENST00000268603 CATSPER3Q86XQ3 398 aa13.53□□□□□ -0.24
CDH11-201ENST00000268603 TRPV6Q9H1D0 765 aa13.53□□□□□ -0.24
CDH11-201ENST00000268603 KDM2BQ8NHM5 1336 aa13.53□□□□□ -0.24
CDH11-201ENST00000268603 PRR23D1E9PI22 279 aaPredicted RBP13.53□□□□□ -0.24
CDH11-201ENST00000268603 GDF11O95390 407 aa13.53□□□□□ -0.24
CDH11-201ENST00000268603 PRR23D2P0DMB1 279 aaPredicted RBP13.53□□□□□ -0.24
CDH11-201ENST00000268603 ZNF790Q6PG37 636 aa13.53□□□□□ -0.24
CDH11-201ENST00000268603 OR8K1Q8NGG5 319 aa13.53□□□□□ -0.24
CDH11-201ENST00000268603 SCG3Q8WXD2 468 aaKnown RBP13.53□□□□□ -0.24
CDH11-201ENST00000268603 TRIM8Q9BZR9 551 aa13.53□□□□□ -0.24
CDH11-201ENST00000268603 KLC2Q9H0B6 622 aa13.53□□□□□ -0.24
CDH11-201ENST00000268603 COBLO75128 1261 aa13.53□□□□□ -0.24
CDH11-201ENST00000268603 GUCY2DQ02846 1103 aa13.53□□□□□ -0.24
CDH11-201ENST00000268603 LRRC31Q6UY01 552 aa13.53□□□□□ -0.24
CDH11-201ENST00000268603 PNMA1Q8ND90 353 aa13.53□□□□□ -0.24
CDH11-201ENST00000268603 TRPC7Q9HCX4 862 aa13.53□□□□□ -0.24
CDH11-201ENST00000268603 GINM1Q9NU53 330 aa13.53□□□□□ -0.24
CDH11-201ENST00000268603 SATB2Q9UPW6 733 aa13.53□□□□□ -0.24
CDH11-201ENST00000268603 TRAF3IP3Q9Y228 551 aa13.53□□□□□ -0.24
CDH11-201ENST00000268603 SOS1Q07889 1333 aaPredicted RBP13.53□□□□□ -0.24
CDH11-201ENST00000268603 PYGBP11216 843 aa13.53□□□□□ -0.24
CDH11-201ENST00000268603 PKN3Q6P5Z2 889 aa13.53□□□□□ -0.24
CDH11-201ENST00000268603 MAN1C1Q9NR34 630 aa13.53□□□□□ -0.24
CDH11-201ENST00000268603 GSNP06396 782 aa13.53□□□□□ -0.24
CDH11-201ENST00000268603 GNAT1P11488 350 aa13.53□□□□□ -0.24
CDH11-201ENST00000268603 PSMC2P35998 433 aaKnown RBP13.53□□□□□ -0.24
CDH11-201ENST00000268603 MFSD4BQ5TF39 518 aa13.53□□□□□ -0.24
CDH11-201ENST00000268603 DESI2Q9BSY9 194 aa13.53□□□□□ -0.24
CDH11-201ENST00000268603 CCT5P48643 541 aa13.53□□□□□ -0.24
CDH11-201ENST00000268603 MTBPQ96DY7 904 aa13.53□□□□□ -0.24
CDH11-201ENST00000268603 YTHDC2Q9H6S0 1430 aaKnown RBP13.53□□□□□ -0.24
CDH11-201ENST00000268603 EFCAB8A8MWE9 144 aa13.52□□□□□ -0.24
CDH11-201ENST00000268603 GCKRQ14397 625 aa13.52□□□□□ -0.24
CDH11-201ENST00000268603 CC2D2BQ6DHV5 1058 aa13.52□□□□□ -0.24
CDH11-201ENST00000268603 MIGA2Q7L4E1 593 aa13.52□□□□□ -0.24
CDH11-201ENST00000268603 APPL2Q8NEU8 664 aa13.52□□□□□ -0.24
CDH11-201ENST00000268603 FAF2Q96CS3 445 aa13.52□□□□□ -0.24
CDH11-201ENST00000268603 MID2Q9UJV3 735 aa13.52□□□□□ -0.24
CDH11-201ENST00000268603 GRIN2AQ12879 1464 aa13.52□□□□□ -0.24
CDH11-201ENST00000268603 HOXD10P28358 340 aa13.52□□□□□ -0.24
CDH11-201ENST00000268603 CACNB1Q02641 598 aaPredicted RBP13.52□□□□□ -0.24
CDH11-201ENST00000268603 KRT72Q14CN4 511 aa13.52□□□□□ -0.24
CDH11-201ENST00000268603 KCTD16Q68DU8 428 aa13.52□□□□□ -0.24
CDH11-201ENST00000268603 TBC1D19Q8N5T2 526 aa13.52□□□□□ -0.24
CDH11-201ENST00000268603 KLHL8Q9P2G9 620 aaPredicted RBP13.52□□□□□ -0.24
CDH11-201ENST00000268603 MKL2Q9ULH7 1088 aa13.52□□□□□ -0.24
CDH11-201ENST00000268603 UBA6A0AVT1 1052 aaPredicted RBP13.52□□□□□ -0.25
CDH11-201ENST00000268603 GTF2H3Q13889 308 aa13.52□□□□□ -0.25
CDH11-201ENST00000268603 C10orf76Q5T2E6 689 aa13.52□□□□□ -0.25
CDH11-201ENST00000268603 TWF2Q6IBS0 349 aaKnown RBP13.52□□□□□ -0.25
CDH11-201ENST00000268603 EXOC4Q96A65 974 aa13.52□□□□□ -0.25
CDH11-201ENST00000268603 COA7Q96BR5 231 aa13.52□□□□□ -0.25
CDH11-201ENST00000268603 POLR3EQ9NVU0 708 aa13.52□□□□□ -0.25
CDH11-201ENST00000268603 MRPS15P82914 257 aaKnown RBP13.52□□□□□ -0.25
CDH11-201ENST00000268603 PPP2R3CQ969Q6 453 aa13.52□□□□□ -0.25
CDH11-201ENST00000268603 UBE2TQ9NPD8 197 aaPredicted RBP13.52□□□□□ -0.25
CDH11-201ENST00000268603 DBNLQ9UJU6 430 aaKnown RBP13.52□□□□□ -0.25
CDH11-201ENST00000268603 LRRC53A6NM62 1247 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms