RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 FSTL1Q12841 308 aa18.2■□□□□ 0.5
TPM1-201ENST00000267996 TPD52L1Q16890 204 aaPredicted RBP18.2■□□□□ 0.5
TPM1-201ENST00000267996 HSP90AA4PQ58FG1 418 aa18.2■□□□□ 0.5
TPM1-201ENST00000267996 C1orf186Q6ZWK4 172 aa18.2■□□□□ 0.5
TPM1-201ENST00000267996 REEP2Q9BRK0 252 aa18.2■□□□□ 0.5
TPM1-201ENST00000267996 RUSC1Q9BVN2 902 aa18.2■□□□□ 0.5
TPM1-201ENST00000267996 IMPACTQ9P2X3 320 aa18.2■□□□□ 0.5
TPM1-201ENST00000267996 ZKSCAN5Q9Y2L8 839 aa18.2■□□□□ 0.5
TPM1-201ENST00000267996 TRIM49BA6NDI0 452 aa18.19■□□□□ 0.5
TPM1-201ENST00000267996 DCAF8L1A6NGE4 600 aa18.19■□□□□ 0.5
TPM1-201ENST00000267996 KRT18P05783 430 aaKnown RBP18.19■□□□□ 0.5
TPM1-201ENST00000267996 QARSP47897 775 aaKnown RBP18.19■□□□□ 0.5
TPM1-201ENST00000267996 CCDC144BQ3MJ40 725 aa18.19■□□□□ 0.5
TPM1-201ENST00000267996 CCDC186Q7Z3E2 898 aa18.19■□□□□ 0.5
TPM1-201ENST00000267996 IRF2BP1Q8IU81 584 aa18.19■□□□□ 0.5
TPM1-201ENST00000267996 BANK1Q8NDB2 785 aa18.19■□□□□ 0.5
TPM1-201ENST00000267996 NOC3LQ8WTT2 800 aaKnown RBP18.19■□□□□ 0.5
TPM1-201ENST00000267996 FGD4Q96M96 766 aa18.19■□□□□ 0.5
TPM1-201ENST00000267996 SEMA6BQ9H3T3 888 aa18.19■□□□□ 0.5
TPM1-201ENST00000267996 THAP9Q9H5L6 903 aa18.19■□□□□ 0.5
TPM1-201ENST00000267996 KCND2Q9NZV8 630 aa18.19■□□□□ 0.5
TPM1-201ENST00000267996 LIMA1Q9UHB6 759 aaKnown RBP18.19■□□□□ 0.5
TPM1-201ENST00000267996 A0A1B0GTH6 734 aa18.18■□□□□ 0.5
TPM1-201ENST00000267996 ZBTB39O15060 712 aa18.18■□□□□ 0.5
TPM1-201ENST00000267996 SPAG1Q07617 926 aa18.18■□□□□ 0.5
TPM1-201ENST00000267996 ANKRD40Q6AI12 368 aa18.18■□□□□ 0.5
TPM1-201ENST00000267996 MORF4L1Q9UBU8 362 aa18.18■□□□□ 0.5
TPM1-201ENST00000267996 DBR1Q9UK59 544 aaKnown RBP18.18■□□□□ 0.5
TPM1-201ENST00000267996 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.18■□□□□ 0.5
TPM1-201ENST00000267996 PTGS1P23219 599 aa18.18■□□□□ 0.5
TPM1-201ENST00000267996 GCLCP48506 637 aaPredicted RBP18.18■□□□□ 0.5
TPM1-201ENST00000267996 MKRN3Q13064 507 aaKnown RBP18.18■□□□□ 0.5
TPM1-201ENST00000267996 NR1I3Q14994 352 aa18.18■□□□□ 0.5
TPM1-201ENST00000267996 HERC4Q5GLZ8 1057 aaPredicted RBP18.18■□□□□ 0.5
TPM1-201ENST00000267996 VSTM4Q8IW00 320 aa18.18■□□□□ 0.5
TPM1-201ENST00000267996 C4orf19Q8IY42 314 aa18.18■□□□□ 0.5
TPM1-201ENST00000267996 SMAP1Q8IYB5 467 aaPredicted RBP18.18■□□□□ 0.5
TPM1-201ENST00000267996 GLIS3Q8NEA6 775 aa18.18■□□□□ 0.5
TPM1-201ENST00000267996 GPRC5AQ8NFJ5 357 aa18.18■□□□□ 0.5
TPM1-201ENST00000267996 ZNF526Q8TF50 670 aaPredicted RBP18.18■□□□□ 0.5
TPM1-201ENST00000267996 CTAGE1Q96RT6 745 aa18.18■□□□□ 0.5
TPM1-201ENST00000267996 MMP19Q99542 508 aa18.18■□□□□ 0.5
TPM1-201ENST00000267996 TCEAL9Q9UHQ7 104 aa18.18■□□□□ 0.5
TPM1-201ENST00000267996 LRRC37A2A6NM11 1700 aa18.17■□□□□ 0.5
TPM1-201ENST00000267996 LOC102724159A0A0B4J2E5 919 aa18.17■□□□□ 0.5
TPM1-201ENST00000267996 B4DLN1 442 aa18.17■□□□□ 0.5
TPM1-201ENST00000267996 CACNB1Q02641 598 aaPredicted RBP18.17■□□□□ 0.5
TPM1-201ENST00000267996 RAD51AP2Q09MP3 1159 aa18.17■□□□□ 0.5
TPM1-201ENST00000267996 PWP2Q15269 919 aaKnown RBP18.17■□□□□ 0.5
TPM1-201ENST00000267996 TCP11X2Q5H9J9 407 aa18.17■□□□□ 0.5
TPM1-201ENST00000267996 MYOCDQ8IZQ8 938 aa18.17■□□□□ 0.5
TPM1-201ENST00000267996 FAM43AQ8N2R8 423 aa18.17■□□□□ 0.5
TPM1-201ENST00000267996 SMCR8Q8TEV9 937 aaPredicted RBP18.17■□□□□ 0.5
TPM1-201ENST00000267996 TRIM47Q96LD4 638 aa18.17■□□□□ 0.5
TPM1-201ENST00000267996 PORCNQ9H237 461 aa18.17■□□□□ 0.5
TPM1-201ENST00000267996 KCNF1Q9H3M0 494 aa18.17■□□□□ 0.5
TPM1-201ENST00000267996 SAMM50Q9Y512 469 aa18.17■□□□□ 0.5
TPM1-201ENST00000267996 PCDHA10Q9Y5I2 948 aa18.17■□□□□ 0.5
TPM1-201ENST00000267996 GAP43P17677 238 aa18.16■□□□□ 0.5
TPM1-201ENST00000267996 GUCY2CP25092 1073 aa18.16■□□□□ 0.5
TPM1-201ENST00000267996 HUNKP57058 714 aa18.16■□□□□ 0.5
TPM1-201ENST00000267996 PSMC5P62195 406 aa18.16■□□□□ 0.5
TPM1-201ENST00000267996 CCNA1P78396 465 aa18.16■□□□□ 0.5
TPM1-201ENST00000267996 LRRC63Q05C16 580 aa18.16■□□□□ 0.5
TPM1-201ENST00000267996 KCTD2Q14681 263 aa18.16■□□□□ 0.5
TPM1-201ENST00000267996 PTPN18Q99952 460 aa18.16■□□□□ 0.5
TPM1-201ENST00000267996 SRRTQ9BXP5 876 aaKnown RBP18.16■□□□□ 0.5
TPM1-201ENST00000267996 FGFBP2Q9BYJ0 223 aa18.16■□□□□ 0.5
TPM1-201ENST00000267996 JPH1Q9HDC5 661 aaPredicted RBP18.16■□□□□ 0.5
TPM1-201ENST00000267996 COL4A3BPQ9Y5P4 624 aa18.16■□□□□ 0.5
TPM1-201ENST00000267996 ZNFX1Q9P2E3 1918 aaKnown RBP18.16■□□□□ 0.5
TPM1-201ENST00000267996 KCNJ18B7U540 433 aa18.15■□□□□ 0.5
TPM1-201ENST00000267996 EEF1GP26641 437 aaKnown RBP18.15■□□□□ 0.5
TPM1-201ENST00000267996 ZNF131P52739 623 aa18.15■□□□□ 0.5
TPM1-201ENST00000267996 SP2Q02086 613 aa18.15■□□□□ 0.5
TPM1-201ENST00000267996 KCNJ12Q14500 433 aa18.15■□□□□ 0.5
TPM1-201ENST00000267996 KRT31Q15323 416 aa18.15■□□□□ 0.5
TPM1-201ENST00000267996 LRRC41Q15345 812 aa18.15■□□□□ 0.5
TPM1-201ENST00000267996 UGCGQ16739 394 aa18.15■□□□□ 0.5
TPM1-201ENST00000267996 ZCWPW2Q504Y3 356 aa18.15■□□□□ 0.5
TPM1-201ENST00000267996 EPM2AIP1Q7L775 607 aaPredicted RBP18.15■□□□□ 0.5
TPM1-201ENST00000267996 TMC6Q7Z403 805 aa18.15■□□□□ 0.5
TPM1-201ENST00000267996 CSGALNACT2Q8N6G5 542 aa18.15■□□□□ 0.5
TPM1-201ENST00000267996 MORC4Q8TE76 937 aa18.15■□□□□ 0.5
TPM1-201ENST00000267996 SCFD1Q8WVM8 642 aa18.15■□□□□ 0.5
TPM1-201ENST00000267996 ZNF830Q96NB3 372 aaPredicted RBP18.15■□□□□ 0.5
TPM1-201ENST00000267996 BCAS3Q9H6U6 928 aa18.15■□□□□ 0.5
TPM1-201ENST00000267996 RTN4Q9NQC3 1192 aaKnown RBP18.15■□□□□ 0.5
TPM1-201ENST00000267996 OLFML3Q9NRN5 406 aa18.15■□□□□ 0.5
TPM1-201ENST00000267996 SLC9A2Q9UBY0 812 aa18.15■□□□□ 0.5
TPM1-201ENST00000267996 ODF2LQ9ULJ1 636 aa18.15■□□□□ 0.5
TPM1-201ENST00000267996 WDR81Q562E7 1941 aa18.15■□□□□ 0.5
TPM1-201ENST00000267996 ARHGEF35A5YM69 484 aa18.15■□□□□ 0.5
TPM1-201ENST00000267996 RSPH10B2B2RC85 870 aa18.15■□□□□ 0.5
TPM1-201ENST00000267996 TBCAO75347 108 aaKnown RBP18.15■□□□□ 0.5
TPM1-201ENST00000267996 PGK2P07205 417 aa18.15■□□□□ 0.5
TPM1-201ENST00000267996 RSPH10BP0C881 870 aa18.15■□□□□ 0.5
TPM1-201ENST00000267996 RARRES1P49788 294 aa18.15■□□□□ 0.5
TPM1-201ENST00000267996 GSDMDP57764 484 aa18.15■□□□□ 0.5
TPM1-201ENST00000267996 FILIP1Q7Z7B0 1213 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms