RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 MAGEC2Q9UBF1 373 aaPredicted RBP12.84□□□□□ -0.35
SCAF11-201ENST00000266589 N4BP3O15049 544 aa12.84□□□□□ -0.35
SCAF11-201ENST00000266589 P4HBP07237 508 aaKnown RBP12.84□□□□□ -0.35
SCAF11-201ENST00000266589 OSBPP22059 807 aa12.84□□□□□ -0.35
SCAF11-201ENST00000266589 CCZ1BP86790 482 aa12.84□□□□□ -0.35
SCAF11-201ENST00000266589 CCZ1P86791 482 aaPredicted RBP12.84□□□□□ -0.35
SCAF11-201ENST00000266589 GPAT2Q6NUI2 795 aa12.84□□□□□ -0.35
SCAF11-201ENST00000266589 EEF2KMTQ96G04 330 aa12.84□□□□□ -0.35
SCAF11-201ENST00000266589 MOV10L1Q9BXT6 1211 aaKnown RBP12.84□□□□□ -0.35
SCAF11-201ENST00000266589 RRAGCQ9HB90 399 aa12.84□□□□□ -0.35
SCAF11-201ENST00000266589 TCEAL9Q9UHQ7 104 aa12.84□□□□□ -0.35
SCAF11-201ENST00000266589 DOCK5Q9H7D0 1870 aa12.83□□□□□ -0.36
SCAF11-201ENST00000266589 RSPH10B2B2RC85 870 aa12.83□□□□□ -0.36
SCAF11-201ENST00000266589 TBCAO75347 108 aaKnown RBP12.83□□□□□ -0.36
SCAF11-201ENST00000266589 STAM2O75886 525 aa12.83□□□□□ -0.36
SCAF11-201ENST00000266589 RGS20O76081 388 aa12.83□□□□□ -0.36
SCAF11-201ENST00000266589 RSPH10BP0C881 870 aa12.83□□□□□ -0.36
SCAF11-201ENST00000266589 SKILP12757 684 aa12.83□□□□□ -0.36
SCAF11-201ENST00000266589 KRT76Q01546 638 aa12.83□□□□□ -0.36
SCAF11-201ENST00000266589 CNTN2Q02246 1040 aa12.83□□□□□ -0.36
SCAF11-201ENST00000266589 LRRC63Q05C16 580 aa12.83□□□□□ -0.36
SCAF11-201ENST00000266589 TBX2Q13207 712 aaPredicted RBP12.83□□□□□ -0.36
SCAF11-201ENST00000266589 SFR1Q86XK3 245 aa12.83□□□□□ -0.36
SCAF11-201ENST00000266589 FAM114A1Q8IWE2 563 aa12.83□□□□□ -0.36
SCAF11-201ENST00000266589 DNERQ8NFT8 737 aa12.83□□□□□ -0.36
SCAF11-201ENST00000266589 ASTN1O14525 1302 aa12.82□□□□□ -0.36
SCAF11-201ENST00000266589 UNCXA6NJT0 531 aa12.82□□□□□ -0.36
SCAF11-201ENST00000266589 WDR64B1ANS9 1081 aa12.82□□□□□ -0.36
SCAF11-201ENST00000266589 MAFGO15525 162 aa12.82□□□□□ -0.36
SCAF11-201ENST00000266589 CCNE2O96020 404 aa12.82□□□□□ -0.36
SCAF11-201ENST00000266589 ERCC3P19447 782 aa12.82□□□□□ -0.36
SCAF11-201ENST00000266589 PBX1P40424 430 aa12.82□□□□□ -0.36
SCAF11-201ENST00000266589 JAK3P52333 1124 aa12.82□□□□□ -0.36
SCAF11-201ENST00000266589 NOLC1Q14978 699 aaKnown RBP eCLIP12.82□□□□□ -0.36
SCAF11-201ENST00000266589 C1orf186Q6ZWK4 172 aa12.82□□□□□ -0.36
SCAF11-201ENST00000266589 IWS1Q96ST2 819 aa12.82□□□□□ -0.36
SCAF11-201ENST00000266589 TSG101Q99816 390 aa12.82□□□□□ -0.36
SCAF11-201ENST00000266589 ZSWIM4Q9H7M6 989 aa12.82□□□□□ -0.36
SCAF11-201ENST00000266589 TXNRD2Q9NNW7 524 aa12.82□□□□□ -0.36
SCAF11-201ENST00000266589 KIF20AO95235 890 aa12.82□□□□□ -0.36
SCAF11-201ENST00000266589 SLC25A27O95847 323 aa12.82□□□□□ -0.36
SCAF11-201ENST00000266589 KCNA2P16389 499 aa12.82□□□□□ -0.36
SCAF11-201ENST00000266589 SFNP31947 248 aa12.82□□□□□ -0.36
SCAF11-201ENST00000266589 QARSP47897 775 aaKnown RBP12.82□□□□□ -0.36
SCAF11-201ENST00000266589 GOLGA8FQ08AF8 430 aa12.82□□□□□ -0.36
SCAF11-201ENST00000266589 GOLGA8DPQ0D2H9 430 aa12.82□□□□□ -0.36
SCAF11-201ENST00000266589 GNPTABQ3T906 1256 aa12.82□□□□□ -0.36
SCAF11-201ENST00000266589 NELFCDQ8IXH7 590 aa12.82□□□□□ -0.36
SCAF11-201ENST00000266589 SCFD1Q8WVM8 642 aa12.82□□□□□ -0.36
SCAF11-201ENST00000266589 CDHR1Q96JP9 859 aa12.82□□□□□ -0.36
SCAF11-201ENST00000266589 CNOT6LQ96LI5 555 aaKnown RBP12.82□□□□□ -0.36
SCAF11-201ENST00000266589 POLD4Q9HCU8 107 aa12.82□□□□□ -0.36
SCAF11-201ENST00000266589 RBPJLQ9UBG7 517 aa12.82□□□□□ -0.36
SCAF11-201ENST00000266589 COL4A3BPQ9Y5P4 624 aa12.82□□□□□ -0.36
SCAF11-201ENST00000266589 LRRC37A2A6NM11 1700 aa12.81□□□□□ -0.36
SCAF11-201ENST00000266589 ARHGEF35A5YM69 484 aa12.81□□□□□ -0.36
SCAF11-201ENST00000266589 FAM13AO94988 1023 aa12.81□□□□□ -0.36
SCAF11-201ENST00000266589 ALDH5A1P51649 535 aaPredicted RBP12.81□□□□□ -0.36
SCAF11-201ENST00000266589 STXBP2Q15833 593 aa12.81□□□□□ -0.36
SCAF11-201ENST00000266589 UGCGQ16739 394 aa12.81□□□□□ -0.36
SCAF11-201ENST00000266589 ZCWPW2Q504Y3 356 aa12.81□□□□□ -0.36
SCAF11-201ENST00000266589 ZNF746Q6NUN9 644 aaPredicted RBP12.81□□□□□ -0.36
SCAF11-201ENST00000266589 GBA2Q9HCG7 927 aaPredicted RBP12.81□□□□□ -0.36
SCAF11-201ENST00000266589 KCND2Q9NZV8 630 aa12.81□□□□□ -0.36
SCAF11-201ENST00000266589 WDR81Q562E7 1941 aa12.81□□□□□ -0.36
SCAF11-201ENST00000266589 LGALS16A8MUM7 142 aa12.81□□□□□ -0.36
SCAF11-201ENST00000266589 SPATA31C2B4DYI2 1134 aa12.81□□□□□ -0.36
SCAF11-201ENST00000266589 POTEB2H3BUK9 544 aa12.81□□□□□ -0.36
SCAF11-201ENST00000266589 FGFR1OPO95684 399 aaKnown RBP12.81□□□□□ -0.36
SCAF11-201ENST00000266589 GAP43P17677 238 aa12.81□□□□□ -0.36
SCAF11-201ENST00000266589 CASP5P51878 434 aa12.81□□□□□ -0.36
SCAF11-201ENST00000266589 FKBP1BP68106 108 aa12.81□□□□□ -0.36
SCAF11-201ENST00000266589 UBXN1Q04323 297 aa12.81□□□□□ -0.36
SCAF11-201ENST00000266589 FSTL1Q12841 308 aa12.81□□□□□ -0.36
SCAF11-201ENST00000266589 Q3C1V9 767 aa12.81□□□□□ -0.36
SCAF11-201ENST00000266589 FOXR2Q6PJQ5 311 aa12.81□□□□□ -0.36
SCAF11-201ENST00000266589 LRRC55Q6ZSA7 311 aa12.81□□□□□ -0.36
SCAF11-201ENST00000266589 TUBGCP2Q9BSJ2 902 aa12.81□□□□□ -0.36
SCAF11-201ENST00000266589 R3HDMLQ9H3Y0 253 aa12.81□□□□□ -0.36
SCAF11-201ENST00000266589 BCAS3Q9H6U6 928 aa12.81□□□□□ -0.36
SCAF11-201ENST00000266589 SPTLC3Q9NUV7 552 aa12.81□□□□□ -0.36
SCAF11-201ENST00000266589 PNMA3Q9UL41 463 aa12.81□□□□□ -0.36
SCAF11-201ENST00000266589 NFASCO94856 1347 aa12.8□□□□□ -0.36
SCAF11-201ENST00000266589 ITIH6Q6UXX5 1313 aa12.8□□□□□ -0.36
SCAF11-201ENST00000266589 MYH11P35749 1972 aa12.8□□□□□ -0.36
SCAF11-201ENST00000266589 SOWAHBA6NEL2 793 aa12.8□□□□□ -0.36
SCAF11-201ENST00000266589 PES1O00541 588 aaKnown RBP12.8□□□□□ -0.36
SCAF11-201ENST00000266589 NRDCO43847 1150 aa12.8□□□□□ -0.36
SCAF11-201ENST00000266589 EIF3JO75822 258 aaKnown RBP12.8□□□□□ -0.36
SCAF11-201ENST00000266589 LYPLA2O95372 231 aa12.8□□□□□ -0.36
SCAF11-201ENST00000266589 TPM2P07951 284 aa12.8□□□□□ -0.36
SCAF11-201ENST00000266589 COPB2P35606 906 aa12.8□□□□□ -0.36
SCAF11-201ENST00000266589 MTIF2P46199 727 aaKnown RBP12.8□□□□□ -0.36
SCAF11-201ENST00000266589 PSMC5P62195 406 aa12.8□□□□□ -0.36
SCAF11-201ENST00000266589 MKRN3Q13064 507 aaKnown RBP12.8□□□□□ -0.36
SCAF11-201ENST00000266589 RDM1Q8NG50 284 aa12.8□□□□□ -0.36
SCAF11-201ENST00000266589 SENP7Q9BQF6 1050 aa12.8□□□□□ -0.36
SCAF11-201ENST00000266589 KCTD10Q9H3F6 313 aa12.8□□□□□ -0.36
SCAF11-201ENST00000266589 MRPL44Q9H9J2 332 aaKnown RBP12.8□□□□□ -0.36
SCAF11-201ENST00000266589 JPH1Q9HDC5 661 aaPredicted RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms