RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 SPATA31A6Q5VVP1 1343 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 MYBP10242 640 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 PCK1P35558 622 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 SLC1A4P43007 532 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 CCNG1P51959 295 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 KIF11P52732 1056 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 TSR1Q2NL82 804 aaKnown RBP9.57□□□□□ -0.88
VAPB-201ENST00000265619 GALNTL6Q49A17 601 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 AKNAD1Q5T1N1 836 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 RETREG2Q8NC44 543 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 NCOA7Q8NI08 942 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 WHAMMQ8TF30 809 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 P3H4Q92791 437 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 KIFAP3Q92845 792 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 CELF1Q92879 486 aaKnown RBP9.57□□□□□ -0.88
VAPB-201ENST00000265619 KLHL29Q96CT2 875 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 CCDC42Q96M95 316 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 SELENOSQ9BQE4 189 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 AP1M1Q9BXS5 423 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 LRP2BPQ9P2M1 347 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 SLIT2O94813 1529 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 PDS5AQ29RF7 1337 aaKnown RBP9.57□□□□□ -0.88
VAPB-201ENST00000265619 COL22A1Q8NFW1 1626 aaPredicted RBP9.57□□□□□ -0.88
VAPB-201ENST00000265619 hCG_2014768A0A024R1R8 64 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 CFAP73A6NFT4 308 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 CYP1A1P04798 512 aaPredicted RBP9.57□□□□□ -0.88
VAPB-201ENST00000265619 KIF5BP33176 963 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 TRIM29Q14134 588 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 ZNF34Q8IZ26 560 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 LRRC42Q9Y546 428 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 ADAMTS3O15072 1205 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 RAD23BP54727 409 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 SLMAPQ14BN4 828 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 IMMTQ16891 758 aaKnown RBP9.57□□□□□ -0.88
VAPB-201ENST00000265619 CFAP221Q4G0U5 840 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 SPTY2D1Q68D10 685 aaPredicted RBP9.57□□□□□ -0.88
VAPB-201ENST00000265619 LRIG3Q6UXM1 1119 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 FITM2Q8N6M3 262 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 ZNF579Q8NAF0 562 aaKnown RBP9.57□□□□□ -0.88
VAPB-201ENST00000265619 PCMTD1Q96MG8 357 aaPredicted RBP9.57□□□□□ -0.88
VAPB-201ENST00000265619 ARHGEF3Q9NR81 526 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 GALNT8Q9NY28 637 aa9.57□□□□□ -0.88
VAPB-201ENST00000265619 SHANK3Q9BYB0 1731 aa9.56□□□□□ -0.88
VAPB-201ENST00000265619 DAPK3O43293 454 aa9.56□□□□□ -0.88
VAPB-201ENST00000265619 PALMO75781 387 aa9.56□□□□□ -0.88
VAPB-201ENST00000265619 VIMP08670 466 aaKnown RBP9.56□□□□□ -0.88
VAPB-201ENST00000265619 MCAMP43121 646 aa9.56□□□□□ -0.88
VAPB-201ENST00000265619 CHRNDQ07001 517 aa9.56□□□□□ -0.88
VAPB-201ENST00000265619 LRRC14Q15048 493 aa9.56□□□□□ -0.88
VAPB-201ENST00000265619 KANK3Q6NY19 840 aa9.56□□□□□ -0.88
VAPB-201ENST00000265619 ASRGL1Q7L266 308 aa9.56□□□□□ -0.88
VAPB-201ENST00000265619 RALYLQ86SE5 291 aaKnown RBP9.56□□□□□ -0.88
VAPB-201ENST00000265619 TRIM42Q8IWZ5 723 aa9.56□□□□□ -0.88
VAPB-201ENST00000265619 TTC8Q8TAM2 541 aa9.56□□□□□ -0.88
VAPB-201ENST00000265619 UHMK1Q8TAS1 419 aaKnown RBP9.56□□□□□ -0.88
VAPB-201ENST00000265619 MAIP1Q8WWC4 291 aa9.56□□□□□ -0.88
VAPB-201ENST00000265619 RMDN2Q96LZ7 410 aa9.56□□□□□ -0.88
VAPB-201ENST00000265619 GOLGA8AA7E2F4 631 aa9.56□□□□□ -0.88
VAPB-201ENST00000265619 PEX11AO75192 247 aa9.56□□□□□ -0.88
VAPB-201ENST00000265619 LUC7L3O95232 432 aaKnown RBP9.56□□□□□ -0.88
VAPB-201ENST00000265619 SRGNP10124 158 aa9.56□□□□□ -0.88
VAPB-201ENST00000265619 SLC5A1P13866 664 aa9.56□□□□□ -0.88
VAPB-201ENST00000265619 BPIFB4P59827 614 aa9.56□□□□□ -0.88
VAPB-201ENST00000265619 MGAT5Q09328 741 aa9.56□□□□□ -0.88
VAPB-201ENST00000265619 ZNF174Q15697 407 aa9.56□□□□□ -0.88
VAPB-201ENST00000265619 IL17AQ16552 155 aa9.56□□□□□ -0.88
VAPB-201ENST00000265619 SPIRE2Q8WWL2 714 aa9.56□□□□□ -0.88
VAPB-201ENST00000265619 TLCD1Q96CP7 247 aa9.56□□□□□ -0.88
VAPB-201ENST00000265619 INPP4AQ96PE3 977 aaPredicted RBP9.56□□□□□ -0.88
VAPB-201ENST00000265619 CELF4Q9BZC1 486 aaKnown RBP9.56□□□□□ -0.88
VAPB-201ENST00000265619 MAF1Q9H063 256 aa9.56□□□□□ -0.88
VAPB-201ENST00000265619 MLXIPLQ9NP71 852 aa9.56□□□□□ -0.88
VAPB-201ENST00000265619 RHBDL2Q9NX52 303 aa9.56□□□□□ -0.88
VAPB-201ENST00000265619 PPP1R1BQ9UD71 204 aaPredicted RBP9.56□□□□□ -0.88
VAPB-201ENST00000265619 PHF24Q9UPV7 400 aa9.56□□□□□ -0.88
VAPB-201ENST00000265619 ERVV-1B6SEH8 477 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 PDE8BO95263 885 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 ETS2P15036 469 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 EHHADHQ08426 723 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 BNIP1Q12981 228 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 SPA17Q15506 151 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 CCDC38Q502W7 563 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 CCDC178Q5BJE1 867 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 PDXDC2PQ6P474 469 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 NDNQ99608 321 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 DDX50Q9BQ39 737 aaKnown RBP9.55□□□□□ -0.88
VAPB-201ENST00000265619 DDX47Q9H0S4 455 aaKnown RBP9.55□□□□□ -0.88
VAPB-201ENST00000265619 ISCUQ9H1K1 167 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 MYH14Q7Z406 1995 aaKnown RBP9.55□□□□□ -0.88
VAPB-201ENST00000265619 F8VZ95 297 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 PRDM1O75626 825 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 NTSR2O95665 410 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 ITGA4P13612 1032 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 KLRK1P26718 216 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 COPS2P61201 443 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 BIRC3Q13489 604 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 ITIH4Q14624 930 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 MIIPQ5JXC2 388 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 AGBL2Q5U5Z8 902 aa9.55□□□□□ -0.88
VAPB-201ENST00000265619 MAGEB6Q8N7X4 407 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms