RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 DAAM1Q9Y4D1 1078 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 LRRC37A2A6NM11 1700 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 PPIP5K2O43314 1243 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 ZBTB48P10074 688 aaPredicted RBP12.32□□□□□ -0.44
MSH3-201ENST00000265081 EIF4A3P38919 411 aaKnown RBP12.32□□□□□ -0.44
MSH3-201ENST00000265081 PRKCIP41743 596 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 SETQ01105 290 aaPredicted RBP12.32□□□□□ -0.44
MSH3-201ENST00000265081 MMGT1Q8N4V1 131 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 TRIM34Q9BYJ4 488 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 SIX2Q9NPC8 291 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 TYW1Q9NV66 732 aaKnown RBP12.32□□□□□ -0.44
MSH3-201ENST00000265081 FEM1BQ9UK73 627 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 DUSP10Q9Y6W6 482 aa12.32□□□□□ -0.44
MSH3-201ENST00000265081 ZC3H4Q9UPT8 1303 aaKnown RBP12.31□□□□□ -0.44
MSH3-201ENST00000265081 MEIS1O00470 390 aa12.31□□□□□ -0.44
MSH3-201ENST00000265081 PPP1R37O75864 691 aa12.31□□□□□ -0.44
MSH3-201ENST00000265081 FAM83BQ5T0W9 1011 aa12.31□□□□□ -0.44
MSH3-201ENST00000265081 SECISBP2LQ93073 1101 aaKnown RBP12.31□□□□□ -0.44
MSH3-201ENST00000265081 RUSC1Q9BVN2 902 aa12.31□□□□□ -0.44
MSH3-201ENST00000265081 VIPAS39Q9H9C1 493 aa12.31□□□□□ -0.44
MSH3-201ENST00000265081 DMAC2Q9NW81 257 aa12.31□□□□□ -0.44
MSH3-201ENST00000265081 IDEP14735 1019 aa12.31□□□□□ -0.44
MSH3-201ENST00000265081 RXRBP28702 533 aa12.31□□□□□ -0.44
MSH3-201ENST00000265081 TNFRSF8P28908 595 aa12.31□□□□□ -0.44
MSH3-201ENST00000265081 CAP2P40123 477 aa12.31□□□□□ -0.44
MSH3-201ENST00000265081 RBM5P52756 815 aaKnown RBP eCLIP12.31□□□□□ -0.44
MSH3-201ENST00000265081 EPHA7Q15375 998 aa12.31□□□□□ -0.44
MSH3-201ENST00000265081 RINT1Q6NUQ1 792 aa12.31□□□□□ -0.44
MSH3-201ENST00000265081 NEK11Q8NG66 645 aa12.31□□□□□ -0.44
MSH3-201ENST00000265081 ACER1Q8TDN7 264 aa12.31□□□□□ -0.44
MSH3-201ENST00000265081 EEF2KMTQ96G04 330 aa12.31□□□□□ -0.44
MSH3-201ENST00000265081 CCDC42Q96M95 316 aa12.31□□□□□ -0.44
MSH3-201ENST00000265081 MMS19Q96T76 1030 aa12.31□□□□□ -0.44
MSH3-201ENST00000265081 CKAP4Q07065 602 aaKnown RBP12.31□□□□□ -0.44
MSH3-201ENST00000265081 NCAPH2Q6IBW4 605 aa12.31□□□□□ -0.44
MSH3-201ENST00000265081 MAP3K20Q9NYL2 800 aaKnown RBP12.31□□□□□ -0.44
MSH3-201ENST00000265081 SEL1LQ9UBV2 794 aa12.31□□□□□ -0.44
MSH3-201ENST00000265081 SALL4Q9UJQ4 1053 aa12.31□□□□□ -0.44
MSH3-201ENST00000265081 CAPN6Q9Y6Q1 641 aa12.31□□□□□ -0.44
MSH3-201ENST00000265081 CES2O00748 559 aa12.3□□□□□ -0.44
MSH3-201ENST00000265081 SNAP25P60880 206 aa12.3□□□□□ -0.44
MSH3-201ENST00000265081 CYP2W1Q8TAV3 490 aa12.3□□□□□ -0.44
MSH3-201ENST00000265081 IFIH1Q9BYX4 1025 aaKnown RBP12.3□□□□□ -0.44
MSH3-201ENST00000265081 FAM207AQ9NSI2 230 aaPredicted RBP12.3□□□□□ -0.44
MSH3-201ENST00000265081 HDAC6Q9UBN7 1215 aa12.3□□□□□ -0.44
MSH3-201ENST00000265081 RGS17Q9UGC6 210 aaPredicted RBP12.3□□□□□ -0.44
MSH3-201ENST00000265081 PUF60Q9UHX1 559 aaKnown RBP12.3□□□□□ -0.44
MSH3-201ENST00000265081 USP20Q9Y2K6 914 aa12.3□□□□□ -0.44
MSH3-201ENST00000265081 PCDHGC5Q9Y5F6 944 aa12.3□□□□□ -0.44
MSH3-201ENST00000265081 TGFB1I1O43294 461 aa12.3□□□□□ -0.44
MSH3-201ENST00000265081 VSNL1P62760 191 aa12.3□□□□□ -0.44
MSH3-201ENST00000265081 HERC4Q5GLZ8 1057 aaPredicted RBP12.3□□□□□ -0.44
MSH3-201ENST00000265081 IRF2BP2Q7Z5L9 587 aa12.3□□□□□ -0.44
MSH3-201ENST00000265081 SFR1Q86XK3 245 aa12.3□□□□□ -0.44
MSH3-201ENST00000265081 BHMG1C9JSJ3 638 aaPredicted RBP12.3□□□□□ -0.44
MSH3-201ENST00000265081 PDE2AO00408 941 aaPredicted RBP12.3□□□□□ -0.44
MSH3-201ENST00000265081 AARSP49588 968 aaKnown RBP eCLIP12.3□□□□□ -0.44
MSH3-201ENST00000265081 KIF5AQ12840 1032 aa12.3□□□□□ -0.44
MSH3-201ENST00000265081 TXLNBQ8N3L3 684 aa12.3□□□□□ -0.44
MSH3-201ENST00000265081 TTLL6Q8N841 843 aa12.3□□□□□ -0.44
MSH3-201ENST00000265081 MKNK1Q9BUB5 465 aa12.3□□□□□ -0.44
MSH3-201ENST00000265081 ODF2LQ9ULJ1 636 aa12.3□□□□□ -0.44
MSH3-201ENST00000265081 TRAF5O00463 557 aa12.29□□□□□ -0.44
MSH3-201ENST00000265081 GUCY2CP25092 1073 aa12.29□□□□□ -0.44
MSH3-201ENST00000265081 POLD1P28340 1107 aa12.29□□□□□ -0.44
MSH3-201ENST00000265081 ZNF280AP59817 542 aaPredicted RBP12.29□□□□□ -0.44
MSH3-201ENST00000265081 ADAM9Q13443 819 aa12.29□□□□□ -0.44
MSH3-201ENST00000265081 KRT26Q7Z3Y9 468 aa12.29□□□□□ -0.44
MSH3-201ENST00000265081 KIAA1328Q86T90 577 aa12.29□□□□□ -0.44
MSH3-201ENST00000265081 SLC9A9Q8IVB4 645 aa12.29□□□□□ -0.44
MSH3-201ENST00000265081 NEK9Q8TD19 979 aa12.29□□□□□ -0.44
MSH3-201ENST00000265081 CHURC1Q8WUH1 139 aa12.29□□□□□ -0.44
MSH3-201ENST00000265081 SYT11Q9BT88 431 aa12.29□□□□□ -0.44
MSH3-201ENST00000265081 CALUO43852 315 aaPredicted RBP12.29□□□□□ -0.44
MSH3-201ENST00000265081 MYBP10242 640 aa12.29□□□□□ -0.44
MSH3-201ENST00000265081 MAPTP10636 758 aaKnown RBP12.29□□□□□ -0.44
MSH3-201ENST00000265081 PRELPP51888 382 aa12.29□□□□□ -0.44
MSH3-201ENST00000265081 MYBPC2Q14324 1141 aa12.29□□□□□ -0.44
MSH3-201ENST00000265081 NAB2Q15742 525 aa12.29□□□□□ -0.44
MSH3-201ENST00000265081 EZH2Q15910 746 aaKnown RBP12.29□□□□□ -0.44
MSH3-201ENST00000265081 SLC18A3Q16572 532 aa12.29□□□□□ -0.44
MSH3-201ENST00000265081 USH1GQ495M9 461 aa12.29□□□□□ -0.44
MSH3-201ENST00000265081 C10orf76Q5T2E6 689 aa12.29□□□□□ -0.44
MSH3-201ENST00000265081 RRAGAQ7L523 313 aa12.29□□□□□ -0.44
MSH3-201ENST00000265081 CLEC4DQ8WXI8 215 aa12.29□□□□□ -0.44
MSH3-201ENST00000265081 TEPSINQ96N21 525 aa12.29□□□□□ -0.44
MSH3-201ENST00000265081 RIT2Q99578 217 aa12.29□□□□□ -0.44
MSH3-201ENST00000265081 MRPL11Q9Y3B7 192 aaKnown RBP12.29□□□□□ -0.44
MSH3-201ENST00000265081 GCOM1H8Y6P7 765 aaPredicted RBP12.29□□□□□ -0.44
MSH3-201ENST00000265081 C21orf2O43822 256 aa12.29□□□□□ -0.44
MSH3-201ENST00000265081 CLSTN1O94985 981 aa12.29□□□□□ -0.44
MSH3-201ENST00000265081 LYPLA2O95372 231 aa12.29□□□□□ -0.44
MSH3-201ENST00000265081 ICAM1P05362 532 aa12.29□□□□□ -0.44
MSH3-201ENST00000265081 POLR2MP0CAP2 368 aa12.29□□□□□ -0.44
MSH3-201ENST00000265081 TAL1P17542 331 aaPredicted RBP12.29□□□□□ -0.44
MSH3-201ENST00000265081 CYP27A1Q02318 531 aa12.29□□□□□ -0.44
MSH3-201ENST00000265081 ST7Q9NRC1 585 aa12.29□□□□□ -0.44
MSH3-201ENST00000265081 WRAP73Q9P2S5 460 aaPredicted RBP12.29□□□□□ -0.44
MSH3-201ENST00000265081 DICER1Q9UPY3 1922 aaKnown RBP12.29□□□□□ -0.44
MSH3-201ENST00000265081 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms