RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.67■□□□□ 0.423e-7■■□□□ 14
GPC1-201ENST00000264039 C6orf50Q9HD87 102 aa17.67■□□□□ 0.42
GPC1-201ENST00000264039 COL4A3BPQ9Y5P4 624 aa17.67■□□□□ 0.42
GPC1-201ENST00000264039 ABCA9Q8IUA7 1624 aa17.67■□□□□ 0.42
GPC1-201ENST00000264039 TNFAIP3P21580 790 aa17.67■□□□□ 0.42
GPC1-201ENST00000264039 FKBP3Q00688 224 aaKnown RBP17.67■□□□□ 0.42
GPC1-201ENST00000264039 LAMB3Q13751 1172 aa17.67■□□□□ 0.42
GPC1-201ENST00000264039 CALCRLQ16602 461 aa17.67■□□□□ 0.42
GPC1-201ENST00000264039 FAM26FQ5R3K3 315 aa17.67■□□□□ 0.42
GPC1-201ENST00000264039 TMTC3Q6ZXV5 915 aa17.67■□□□□ 0.42
GPC1-201ENST00000264039 TAB3Q8N5C8 712 aaPredicted RBP17.67■□□□□ 0.42
GPC1-201ENST00000264039 ABTB1Q969K4 478 aaPredicted RBP17.67■□□□□ 0.42
GPC1-201ENST00000264039 CYTH2Q99418 400 aa17.67■□□□□ 0.42
GPC1-201ENST00000264039 PITPNM3Q9BZ71 974 aa17.67■□□□□ 0.42
GPC1-201ENST00000264039 METTL5Q9NRN9 209 aaKnown RBP17.67■□□□□ 0.42
GPC1-201ENST00000264039 SAP30BPQ9UHR5 308 aaKnown RBP17.67■□□□□ 0.42
GPC1-201ENST00000264039 ATP6V0A2Q9Y487 856 aa17.67■□□□□ 0.42
GPC1-201ENST00000264039 LRRN2O75325 713 aa17.66■□□□□ 0.42
GPC1-201ENST00000264039 UAP1Q16222 522 aaPredicted RBP17.66■□□□□ 0.42
GPC1-201ENST00000264039 LARP4BQ92615 738 aaKnown RBP17.66■□□□□ 0.42
GPC1-201ENST00000264039 USP15Q9Y4E8 981 aaPredicted RBP17.66■□□□□ 0.42
GPC1-201ENST00000264039 PIK3C2BO00750 1634 aa17.66■□□□□ 0.42
GPC1-201ENST00000264039 HSPA9P38646 679 aaKnown RBP17.66■□□□□ 0.42
GPC1-201ENST00000264039 RCN2Q14257 317 aa17.66■□□□□ 0.42
GPC1-201ENST00000264039 MESDQ14696 234 aa17.66■□□□□ 0.42
GPC1-201ENST00000264039 WLSQ5T9L3 541 aa17.66■□□□□ 0.42
GPC1-201ENST00000264039 KDM4CQ9H3R0 1056 aa17.66■□□□□ 0.42
GPC1-201ENST00000264039 JCADQ9P266 1359 aa17.66■□□□□ 0.42
GPC1-201ENST00000264039 PLEKHG1Q9ULL1 1385 aa17.66■□□□□ 0.42
GPC1-201ENST00000264039 GSTA5Q7RTV2 222 aa17.65■□□□□ 0.42
GPC1-201ENST00000264039 APBB1IPQ7Z5R6 666 aaPredicted RBP17.65■□□□□ 0.42
GPC1-201ENST00000264039 P3H4Q92791 437 aa17.65■□□□□ 0.42
GPC1-201ENST00000264039 GJA10Q969M2 543 aa17.65■□□□□ 0.42
GPC1-201ENST00000264039 PBKQ96KB5 322 aa17.65■□□□□ 0.42
GPC1-201ENST00000264039 NEUROG2Q9H2A3 272 aa17.65■□□□□ 0.42
GPC1-201ENST00000264039 POC1B-GALNT4F8VUJ3 575 aa17.65■□□□□ 0.42
GPC1-201ENST00000264039 THAP12O43422 761 aa17.65■□□□□ 0.42
GPC1-201ENST00000264039 OPHN1O60890 802 aa17.65■□□□□ 0.42
GPC1-201ENST00000264039 CYP2D6P10635 497 aa17.65■□□□□ 0.42
GPC1-201ENST00000264039 SEMA3FQ13275 785 aa17.65■□□□□ 0.42
GPC1-201ENST00000264039 BYSLQ13895 437 aaKnown RBP17.65■□□□□ 0.42
GPC1-201ENST00000264039 CFAP157Q5JU67 520 aa17.65■□□□□ 0.42
GPC1-201ENST00000264039 TMEM237Q96Q45 408 aa17.65■□□□□ 0.42
GPC1-201ENST00000264039 CRNKL1Q9BZJ0 848 aaKnown RBP17.65■□□□□ 0.42
GPC1-201ENST00000264039 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.65■□□□□ 0.42
GPC1-201ENST00000264039 LMTK2Q8IWU2 1503 aa17.65■□□□□ 0.42
GPC1-201ENST00000264039 DLC1Q96QB1 1528 aa17.65■□□□□ 0.42
GPC1-201ENST00000264039 RHOBTB3O94955 611 aa17.65■□□□□ 0.42
GPC1-201ENST00000264039 DRD4P21917 467 aa17.65■□□□□ 0.42
GPC1-201ENST00000264039 NR2F2P24468 414 aa17.65■□□□□ 0.42
GPC1-201ENST00000264039 TARSP26639 723 aaKnown RBP17.65■□□□□ 0.42
GPC1-201ENST00000264039 SEL1L2Q5TEA6 688 aa17.65■□□□□ 0.42
GPC1-201ENST00000264039 TGS1Q96RS0 853 aaKnown RBP17.65■□□□□ 0.42
GPC1-201ENST00000264039 FAM129AQ9BZQ8 928 aa17.65■□□□□ 0.42
GPC1-201ENST00000264039 BRAFP15056 766 aa17.64■□□□□ 0.42
GPC1-201ENST00000264039 PRLRP16471 622 aa17.64■□□□□ 0.42
GPC1-201ENST00000264039 KCNJ1P48048 391 aa17.64■□□□□ 0.42
GPC1-201ENST00000264039 EIF3BP55884 814 aaKnown RBP17.64■□□□□ 0.42
GPC1-201ENST00000264039 PPP2R5BQ15173 497 aa17.64■□□□□ 0.42
GPC1-201ENST00000264039 PKN1Q16512 942 aa17.64■□□□□ 0.42
GPC1-201ENST00000264039 EXOC3L4Q17RC7 722 aa17.64■□□□□ 0.42
GPC1-201ENST00000264039 LRIG3Q6UXM1 1119 aa17.64■□□□□ 0.42
GPC1-201ENST00000264039 CEP120Q8N960 986 aa17.64■□□□□ 0.42
GPC1-201ENST00000264039 FBXO25Q8TCJ0 367 aa17.64■□□□□ 0.42
GPC1-201ENST00000264039 ERP27Q96DN0 273 aa17.64■□□□□ 0.42
GPC1-201ENST00000264039 ARMCX3Q9UH62 379 aaPredicted RBP17.64■□□□□ 0.42
GPC1-201ENST00000264039 FOXO6A8MYZ6 492 aa17.64■□□□□ 0.41
GPC1-201ENST00000264039 CLIC2O15247 247 aa17.64■□□□□ 0.41
GPC1-201ENST00000264039 KRT16P08779 473 aa17.64■□□□□ 0.41
GPC1-201ENST00000264039 TRAPPC10P48553 1259 aa17.64■□□□□ 0.41
GPC1-201ENST00000264039 XRCC4Q13426 336 aa17.64■□□□□ 0.41
GPC1-201ENST00000264039 SLMAPQ14BN4 828 aa17.64■□□□□ 0.41
GPC1-201ENST00000264039 SLC18A3Q16572 532 aa17.64■□□□□ 0.41
GPC1-201ENST00000264039 CCDC77Q9BR77 488 aa17.64■□□□□ 0.41
GPC1-201ENST00000264039 DCTN4Q9UJW0 460 aa17.64■□□□□ 0.41
GPC1-201ENST00000264039 FBXO3Q9UK99 471 aa17.64■□□□□ 0.41
GPC1-201ENST00000264039 ASAP1Q9ULH1 1129 aa17.64■□□□□ 0.41
GPC1-201ENST00000264039 PCDHA4Q9UN74 947 aa17.64■□□□□ 0.41
GPC1-201ENST00000264039 CHADLQ6NUI6 762 aa17.64■□□□□ 0.41
GPC1-201ENST00000264039 FBXL16Q8N461 479 aa17.64■□□□□ 0.41
GPC1-201ENST00000264039 CCT6BQ92526 530 aa17.64■□□□□ 0.41
GPC1-201ENST00000264039 DDX12PQ92771 950 aa17.64■□□□□ 0.41
GPC1-201ENST00000264039 ERGIC2Q96RQ1 377 aa17.64■□□□□ 0.41
GPC1-201ENST00000264039 CTSWP56202 376 aa17.63■□□□□ 0.41
GPC1-201ENST00000264039 COPS2P61201 443 aa17.63■□□□□ 0.41
GPC1-201ENST00000264039 NAB2Q15742 525 aa17.63■□□□□ 0.41
GPC1-201ENST00000264039 IL17AQ16552 155 aa17.63■□□□□ 0.41
GPC1-201ENST00000264039 C6orf118Q5T5N4 469 aa17.63■□□□□ 0.41
GPC1-201ENST00000264039 SPATA21Q7Z572 469 aa17.63■□□□□ 0.41
GPC1-201ENST00000264039 SYCE1Q8N0S2 351 aa17.63■□□□□ 0.41
GPC1-201ENST00000264039 C3orf20Q8ND61 904 aa17.63■□□□□ 0.41
GPC1-201ENST00000264039 TBCKQ8TEA7 893 aa17.63■□□□□ 0.41
GPC1-201ENST00000264039 SEMA4AQ9H3S1 761 aa17.63■□□□□ 0.41
GPC1-201ENST00000264039 SEMA6BQ9H3T3 888 aa17.63■□□□□ 0.41
GPC1-201ENST00000264039 GRID2IPA4D2P6 1211 aa17.63■□□□□ 0.41
GPC1-201ENST00000264039 PPP1R2P41236 205 aa17.63■□□□□ 0.41
GPC1-201ENST00000264039 STAT1P42224 750 aa17.63■□□□□ 0.41
GPC1-201ENST00000264039 PTK2Q05397 1052 aa17.63■□□□□ 0.41
GPC1-201ENST00000264039 KLC1Q07866 573 aa17.63■□□□□ 0.41
GPC1-201ENST00000264039 ARL6IP4Q66PJ3 421 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms