RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 TECPR2O15040 1411 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 ATP8B1O43520 1251 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 ALKBH5Q6P6C2 394 aaKnown RBP15.18■□□□□ 0.02
CDH3-201ENST00000264012 ZBTB33Q86T24 672 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 ATP2A3Q93084 1043 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 WRNIP1Q96S55 665 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 RNF14Q9UBS8 474 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 CIB2O75838 187 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 ZNF131P52739 623 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 ITPK1Q13572 414 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 PDZD4Q76G19 769 aaPredicted RBP15.18■□□□□ 0.02
CDH3-201ENST00000264012 VPS52Q8N1B4 723 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 FAM71BQ8TC56 605 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 CRAMP1Q96RY5 1269 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 EPB41L5Q9HCM4 733 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 ANAPC4Q9UJX5 808 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 DAAM1Q9Y4D1 1078 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 CD2APQ9Y5K6 639 aa15.18■□□□□ 0.02
CDH3-201ENST00000264012 SEC31AO94979 1220 aaKnown RBP15.17■□□□□ 0.02
CDH3-201ENST00000264012 TDP2O95551 362 aa15.17■□□□□ 0.02
CDH3-201ENST00000264012 IL25Q9H293 177 aa15.17■□□□□ 0.02
CDH3-201ENST00000264012 DAGLAQ9Y4D2 1042 aa15.17■□□□□ 0.02
CDH3-201ENST00000264012 RNF40O75150 1001 aa15.17■□□□□ 0.02
CDH3-201ENST00000264012 APBA1Q02410 837 aa15.17■□□□□ 0.02
CDH3-201ENST00000264012 IFRD2Q12894 506 aaPredicted RBP15.17■□□□□ 0.02
CDH3-201ENST00000264012 PROM2Q8N271 834 aa15.17■□□□□ 0.02
CDH3-201ENST00000264012 MXD3Q9BW11 206 aa15.17■□□□□ 0.02
CDH3-201ENST00000264012 ADGRB1O14514 1584 aa15.17■□□□□ 0.02
CDH3-201ENST00000264012 KIAA1210Q9ULL0 1709 aa15.17■□□□□ 0.02
CDH3-201ENST00000264012 GOLGA8SH3BPF8 625 aa15.17■□□□□ 0.02
CDH3-201ENST00000264012 OSTNP61366 133 aa15.17■□□□□ 0.02
CDH3-201ENST00000264012 GABPAQ06546 454 aa15.17■□□□□ 0.02
CDH3-201ENST00000264012 CCDC13Q8IYE1 715 aa15.17■□□□□ 0.02
CDH3-201ENST00000264012 PPFIBP2Q8ND30 876 aa15.17■□□□□ 0.02
CDH3-201ENST00000264012 RUNDC3BQ96NL0 473 aa15.17■□□□□ 0.02
CDH3-201ENST00000264012 HAUS2Q9NVX0 235 aa15.17■□□□□ 0.02
CDH3-201ENST00000264012 COASYQ13057 564 aa15.17■□□□□ 0.02
CDH3-201ENST00000264012 ZSCAN26Q16670 478 aa15.17■□□□□ 0.02
CDH3-201ENST00000264012 ZNF233A6NK53 670 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 H7C0C1 242 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 FOXN1O15353 648 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 ZBTB7AO95365 584 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 SRGAP2CP0DJJ0 459 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 MAN1A1P33908 653 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 ATP5OP48047 213 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 SLC12A2P55011 1212 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 LLGL1Q15334 1064 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 BANK1Q8NDB2 785 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 FAM193BQ96PV7 902 aaPredicted RBP15.16■□□□□ 0.02
CDH3-201ENST00000264012 FAM114A2Q9NRY5 505 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 SYNJ2BP-COX16A0A087WUM0 186 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 GIPC1O14908 333 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 SPP2Q13103 211 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 SBK1Q52WX2 424 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 CCDC62Q6P9F0 684 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 PADI6Q6TGC4 694 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 NLRP7Q8WX94 980 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 TBC1D22BQ9NU19 505 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 HOXC10Q9NYD6 342 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 COX16Q9P0S2 106 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 WDR64B1ANS9 1081 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 MARK3P27448 753 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 EPHB4P54760 987 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 ATP11AP98196 1134 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 LMNB2Q03252 620 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 C2orf54Q08AI8 447 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 NKX1-1Q15270 411 aaPredicted RBP15.16■□□□□ 0.02
CDH3-201ENST00000264012 Q3C1V9 767 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 ANKRD20A3Q5VUR7 823 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 SNRNP48Q6IEG0 339 aaKnown RBP15.16■□□□□ 0.02
CDH3-201ENST00000264012 FAM149B1Q96BN6 582 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 SLC10A4Q96EP9 437 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 SPZ1Q9BXG8 430 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 ABCB11O95342 1321 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 A6NJR5 290 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 ABL1P00519 1130 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 NR3C1P04150 777 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 PPP1R2P3Q6NXS1 205 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 RSPH3Q86UC2 560 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 PNMA8AQ86V59 439 aaPredicted RBP15.16■□□□□ 0.02
CDH3-201ENST00000264012 NME8Q8N427 588 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 MCUR1Q96AQ8 359 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 MSTO1Q9BUK6 570 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 CAPS2Q9BXY5 557 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 POLD4Q9HCU8 107 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 MRPL47Q9HD33 250 aaKnown RBP15.16■□□□□ 0.02
CDH3-201ENST00000264012 HERC5Q9UII4 1024 aaKnown RBP15.16■□□□□ 0.02
CDH3-201ENST00000264012 TAF6LQ9Y6J9 622 aa15.16■□□□□ 0.02
CDH3-201ENST00000264012 USP32Q8NFA0 1604 aa15.15■□□□□ 0.02
CDH3-201ENST00000264012 POTEFA5A3E0 1075 aa15.15■□□□□ 0.02
CDH3-201ENST00000264012 POTEIP0CG38 1075 aa15.15■□□□□ 0.02
CDH3-201ENST00000264012 TTBK2Q6IQ55 1244 aa15.15■□□□□ 0.02
CDH3-201ENST00000264012 POTEGQ6S5H5 508 aa15.15■□□□□ 0.02
CDH3-201ENST00000264012 POTEEQ6S8J3 1075 aa15.15■□□□□ 0.02
CDH3-201ENST00000264012 PLCD3Q8N3E9 789 aa15.15■□□□□ 0.02
CDH3-201ENST00000264012 DYDC2Q96IM9 177 aa15.15■□□□□ 0.02
CDH3-201ENST00000264012 PBKQ96KB5 322 aa15.15■□□□□ 0.02
CDH3-201ENST00000264012 RNF146Q9NTX7 359 aa15.15■□□□□ 0.02
CDH3-201ENST00000264012 ABHD10Q9NUJ1 306 aa15.15■□□□□ 0.02
CDH3-201ENST00000264012 POLR1AO95602 1720 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms