RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 SMAPO00193 183 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 PRC1O43663 620 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 HEXIM1O94992 359 aaKnown RBP9.09□□□□□ -0.95
LDB3-201ENST00000263066 LINGO3P0C6S8 592 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 EEF2P13639 858 aaKnown RBP9.09□□□□□ -0.95
LDB3-201ENST00000263066 RFC1P35251 1148 aaPredicted RBP9.09□□□□□ -0.95
LDB3-201ENST00000263066 SH3BGRP55822 239 aaPredicted RBP9.09□□□□□ -0.95
LDB3-201ENST00000263066 RBM43Q6ZSC3 357 aaKnown RBP9.09□□□□□ -0.95
LDB3-201ENST00000263066 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.09□□□□□ -0.95
LDB3-201ENST00000263066 SPATA24Q86W54 205 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 CLEC10AQ8IUN9 316 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 DNAJC9Q8WXX5 260 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 CTAGE1Q96RT6 745 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 GPHNQ9NQX3 736 aaPredicted RBP9.09□□□□□ -0.95
LDB3-201ENST00000263066 LRP6O75581 1613 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 FANCGO15287 622 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 COBLO75128 1261 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 GSTO1P78417 241 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 IFIT1BQ5T764 474 aaKnown RBP9.09□□□□□ -0.95
LDB3-201ENST00000263066 TRIM22Q8IYM9 498 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 LRRC47Q8N1G4 583 aaKnown RBP9.09□□□□□ -0.95
LDB3-201ENST00000263066 SMC1BQ8NDV3 1235 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 UHMK1Q8TAS1 419 aaKnown RBP9.09□□□□□ -0.95
LDB3-201ENST00000263066 WDR60Q8WVS4 1066 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 APPBP2Q92624 585 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 P3H4Q92791 437 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 CCDC42Q96M95 316 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 IWS1Q96ST2 819 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 CENPKQ9BS16 269 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.09□□□□□ -0.95
LDB3-201ENST00000263066 CTTNBP2NLQ9P2B4 639 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 POLLQ9UGP5 575 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 R3HDM2Q9Y2K5 976 aaKnown RBP9.09□□□□□ -0.95
LDB3-201ENST00000263066 SLIT3O75094 1523 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 POLRMTO00411 1230 aaKnown RBP9.09□□□□□ -0.95
LDB3-201ENST00000263066 ETS2P15036 469 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 EIF4BP23588 611 aaKnown RBP9.09□□□□□ -0.95
LDB3-201ENST00000263066 RESTQ13127 1097 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 WTAPQ15007 396 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 ATG9AQ7Z3C6 839 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 NCOA7Q8NI08 942 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 KIFAP3Q92845 792 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 ZNF570Q96NI8 536 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 CSRNP1Q96S65 589 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 CPVLQ9H3G5 476 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 HAUS4Q9H6D7 363 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 ETNK1Q9HBU6 452 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 ZSWIM6Q9HCJ5 1215 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 LEMD3Q9Y2U8 911 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 PCDHA5Q9Y5H7 936 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 TOGARAM1Q9Y4F4 1720 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 TCHHQ07283 1943 aa9.09□□□□□ -0.95
LDB3-201ENST00000263066 TUFMP49411 452 aaKnown RBP9.08□□□□□ -0.96
LDB3-201ENST00000263066 MAGOHP61326 146 aaKnown RBP9.08□□□□□ -0.96
LDB3-201ENST00000263066 TFAP4Q01664 338 aa9.08□□□□□ -0.96
LDB3-201ENST00000263066 TDRD12Q587J7 1177 aaKnown RBP9.08□□□□□ -0.96
LDB3-201ENST00000263066 MAGEC3Q8TD91 643 aa9.08□□□□□ -0.96
LDB3-201ENST00000263066 MAGOHBQ96A72 148 aaKnown RBP9.08□□□□□ -0.96
LDB3-201ENST00000263066 LRRC45Q96CN5 670 aa9.08□□□□□ -0.96
LDB3-201ENST00000263066 OSBPL7Q9BZF2 842 aa9.08□□□□□ -0.96
LDB3-201ENST00000263066 INTS9Q9NV88 658 aaKnown RBP9.08□□□□□ -0.96
LDB3-201ENST00000263066 CNTNAP4Q9C0A0 1308 aa9.08□□□□□ -0.96
LDB3-201ENST00000263066 P4HA2O15460 535 aa9.08□□□□□ -0.96
LDB3-201ENST00000263066 FGAP02671 866 aa9.08□□□□□ -0.96
LDB3-201ENST00000263066 ZNF24P17028 368 aa9.08□□□□□ -0.96
LDB3-201ENST00000263066 ZNF131P52739 623 aa9.08□□□□□ -0.96
LDB3-201ENST00000263066 ZBTB17Q13105 803 aa9.08□□□□□ -0.96
LDB3-201ENST00000263066 KIAA0753Q2KHM9 967 aa9.08□□□□□ -0.96
LDB3-201ENST00000263066 TTMPQ5BVD1 217 aa9.08□□□□□ -0.96
LDB3-201ENST00000263066 TLDC1Q6P9B6 456 aa9.08□□□□□ -0.96
LDB3-201ENST00000263066 MTHFD1LQ6UB35 978 aa9.08□□□□□ -0.96
LDB3-201ENST00000263066 OR2W6PQ8NHA6 318 aa9.08□□□□□ -0.96
LDB3-201ENST00000263066 RAB3IL1Q8TBN0 382 aa9.08□□□□□ -0.96
LDB3-201ENST00000263066 PRPF31Q8WWY3 499 aaKnown RBP9.08□□□□□ -0.96
LDB3-201ENST00000263066 PAGR1Q9BTK6 254 aa9.08□□□□□ -0.96
LDB3-201ENST00000263066 ABT1Q9ULW3 272 aaKnown RBP9.08□□□□□ -0.96
LDB3-201ENST00000263066 MAPK8IP1Q9UQF2 711 aa9.08□□□□□ -0.96
LDB3-201ENST00000263066 CLIC4Q9Y696 253 aa9.08□□□□□ -0.96
LDB3-201ENST00000263066 FAM170AA1A519 330 aa9.08□□□□□ -0.96
LDB3-201ENST00000263066 RPS6KB1P23443 525 aa9.08□□□□□ -0.96
LDB3-201ENST00000263066 TSPY1Q01534 308 aa9.08□□□□□ -0.96
LDB3-201ENST00000263066 ZNF280DQ6N043 979 aa9.08□□□□□ -0.96
LDB3-201ENST00000263066 KDM7AQ6ZMT4 941 aa9.08□□□□□ -0.96
LDB3-201ENST00000263066 ANKRD13CQ8N6S4 541 aa9.08□□□□□ -0.96
LDB3-201ENST00000263066 CHMP6Q96FZ7 201 aa9.08□□□□□ -0.96
LDB3-201ENST00000263066 MPHOSPH6Q99547 160 aaKnown RBP9.08□□□□□ -0.96
LDB3-201ENST00000263066 LSG1Q9H089 658 aaKnown RBP9.08□□□□□ -0.96
LDB3-201ENST00000263066 ABCF3Q9NUQ8 709 aa9.08□□□□□ -0.96
LDB3-201ENST00000263066 TAB2Q9NYJ8 693 aa9.08□□□□□ -0.96
LDB3-201ENST00000263066 RABL2AQ9UBK7 228 aaPredicted RBP9.08□□□□□ -0.96
LDB3-201ENST00000263066 DMGDHQ9UI17 866 aaKnown RBP9.08□□□□□ -0.96
LDB3-201ENST00000263066 ZBTB21Q9ULJ3 1066 aa9.08□□□□□ -0.96
LDB3-201ENST00000263066 USP17L3A6NCW0 530 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 USP17L4A6NCW7 530 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 TEX33O43247 280 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 DNAJC6O75061 913 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 SUN1O94901 812 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 BAG2O95816 211 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 SRGNP10124 158 aa9.07□□□□□ -0.96
LDB3-201ENST00000263066 ZNF76P36508 570 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms