RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 TANGO6Q9C0B7 1094 aa24.85■■□□□ 1.57
MCF2L-201ENST00000261963 KCTD10Q9H3F6 313 aa24.85■■□□□ 1.57
MCF2L-201ENST00000261963 SERPINA10Q9UK55 444 aa24.85■■□□□ 1.57
MCF2L-201ENST00000261963 ZNF646O15015 1829 aaPredicted RBP24.85■■□□□ 1.57
MCF2L-201ENST00000261963 GOLGB1Q14789 3259 aaKnown RBP24.85■■□□□ 1.57
MCF2L-201ENST00000261963 GNGT1P63211 74 aa24.84■■□□□ 1.57
MCF2L-201ENST00000261963 ABCB5Q2M3G0 1257 aa24.84■■□□□ 1.57
MCF2L-201ENST00000261963 PRR16Q569H4 304 aa24.84■■□□□ 1.57
MCF2L-201ENST00000261963 HERC4Q5GLZ8 1057 aaPredicted RBP24.84■■□□□ 1.57
MCF2L-201ENST00000261963 CEP63Q96MT8 703 aa24.84■■□□□ 1.57
MCF2L-201ENST00000261963 SH2D4AQ9H788 454 aa24.84■■□□□ 1.57
MCF2L-201ENST00000261963 ASTE1Q2TB18 679 aaPredicted RBP24.84■■□□□ 1.57
MCF2L-201ENST00000261963 GSPT2Q8IYD1 628 aaKnown RBP24.84■■□□□ 1.57
MCF2L-201ENST00000261963 EDEM3Q9BZQ6 932 aa24.84■■□□□ 1.57
MCF2L-201ENST00000261963 ZNF219Q9P2Y4 722 aaPredicted RBP24.84■■□□□ 1.57
MCF2L-201ENST00000261963 CAPN6Q9Y6Q1 641 aa24.84■■□□□ 1.57
MCF2L-201ENST00000261963 RRP1BQ14684 758 aaKnown RBP24.83■■□□□ 1.57
MCF2L-201ENST00000261963 CCDC40Q4G0X9 1142 aa24.83■■□□□ 1.57
MCF2L-201ENST00000261963 CATSPER3Q86XQ3 398 aa24.83■■□□□ 1.57
MCF2L-201ENST00000261963 MLXIPQ9HAP2 919 aa24.83■■□□□ 1.57
MCF2L-201ENST00000261963 DONSONQ9NYP3 566 aa24.83■■□□□ 1.57
MCF2L-201ENST00000261963 PDE2AO00408 941 aaPredicted RBP24.83■■□□□ 1.56
MCF2L-201ENST00000261963 ZNF185O15231 689 aa24.83■■□□□ 1.56
MCF2L-201ENST00000261963 NOL4O94818 638 aa24.83■■□□□ 1.56
MCF2L-201ENST00000261963 MYBL2P10244 700 aa24.83■■□□□ 1.56
MCF2L-201ENST00000261963 USH1GQ495M9 461 aa24.83■■□□□ 1.56
MCF2L-201ENST00000261963 Q4G0T1 1027 aa24.83■■□□□ 1.56
MCF2L-201ENST00000261963 SYDE2Q5VT97 1194 aa24.83■■□□□ 1.56
MCF2L-201ENST00000261963 RPAINQ86UA6 219 aa24.83■■□□□ 1.56
MCF2L-201ENST00000261963 FBXO11Q86XK2 927 aa24.83■■□□□ 1.56
MCF2L-201ENST00000261963 TRIM59Q8IWR1 403 aa24.83■■□□□ 1.56
MCF2L-201ENST00000261963 GRIN2DO15399 1336 aa24.83■■□□□ 1.56
MCF2L-201ENST00000261963 FAM86B1E9PN63 330 aa24.82■■□□□ 1.56
MCF2L-201ENST00000261963 OPLAHO14841 1288 aa24.82■■□□□ 1.56
MCF2L-201ENST00000261963 FAM86B2P0C5J1 330 aa24.82■■□□□ 1.56
MCF2L-201ENST00000261963 MARSP56192 900 aaKnown RBP24.82■■□□□ 1.56
MCF2L-201ENST00000261963 HGSNATQ68CP4 663 aa24.82■■□□□ 1.56
MCF2L-201ENST00000261963 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.82■■□□□ 1.56
MCF2L-201ENST00000261963 ZC3H3Q8IXZ2 948 aaKnown RBP24.82■■□□□ 1.56
MCF2L-201ENST00000261963 PRPF38AQ8NAV1 312 aaKnown RBP24.82■■□□□ 1.56
MCF2L-201ENST00000261963 FLAD1Q8NFF5 587 aa24.82■■□□□ 1.56
MCF2L-201ENST00000261963 TDRD3Q9H7E2 651 aaKnown RBP24.82■■□□□ 1.56
MCF2L-201ENST00000261963 GOLGA8KD6RF30 607 aa24.82■■□□□ 1.56
MCF2L-201ENST00000261963 USO1O60763 962 aaKnown RBP24.82■■□□□ 1.56
MCF2L-201ENST00000261963 SPATA31C1P0DKV0 1188 aa24.82■■□□□ 1.56
MCF2L-201ENST00000261963 PSMC6P62333 389 aa24.82■■□□□ 1.56
MCF2L-201ENST00000261963 RABEP2Q9H5N1 569 aa24.82■■□□□ 1.56
MCF2L-201ENST00000261963 EMILIN3Q9NT22 766 aa24.82■■□□□ 1.56
MCF2L-201ENST00000261963 CLGNO14967 610 aa24.81■■□□□ 1.56
MCF2L-201ENST00000261963 AKR1B10O60218 316 aa24.81■■□□□ 1.56
MCF2L-201ENST00000261963 APBA3O96018 575 aa24.81■■□□□ 1.56
MCF2L-201ENST00000261963 SREBF1P36956 1147 aa24.81■■□□□ 1.56
MCF2L-201ENST00000261963 HAUS3Q68CZ6 603 aa24.81■■□□□ 1.56
MCF2L-201ENST00000261963 STYK1Q6J9G0 422 aa24.81■■□□□ 1.56
MCF2L-201ENST00000261963 TRIM58Q8NG06 486 aa24.81■■□□□ 1.56
MCF2L-201ENST00000261963 CAGE1Q8TC20 777 aa24.81■■□□□ 1.56
MCF2L-201ENST00000261963 FAM184BQ9ULE4 1060 aa24.81■■□□□ 1.56
MCF2L-201ENST00000261963 PITPNM2Q9BZ72 1349 aa24.81■■□□□ 1.56
MCF2L-201ENST00000261963 ATRNL1Q5VV63 1379 aa24.81■■□□□ 1.56
MCF2L-201ENST00000261963 TBX3O15119 743 aa24.81■■□□□ 1.56
MCF2L-201ENST00000261963 GH2P01242 217 aa24.81■■□□□ 1.56
MCF2L-201ENST00000261963 CACNA2D4Q7Z3S7 1137 aa24.81■■□□□ 1.56
MCF2L-201ENST00000261963 SLX4Q8IY92 1834 aa24.81■■□□□ 1.56
MCF2L-201ENST00000261963 AOC3Q16853 763 aa24.8■■□□□ 1.56
MCF2L-201ENST00000261963 ARHGAP27Q6ZUM4 889 aa24.8■■□□□ 1.56
MCF2L-201ENST00000261963 NLRC4Q9NPP4 1024 aa24.8■■□□□ 1.56
MCF2L-201ENST00000261963 CEP72Q9P209 647 aa24.8■■□□□ 1.56
MCF2L-201ENST00000261963 CAPN7Q9Y6W3 813 aa24.8■■□□□ 1.56
MCF2L-201ENST00000261963 A0A1W2PRG0 241 aa24.8■■□□□ 1.56
MCF2L-201ENST00000261963 MEIS1O00470 390 aa24.8■■□□□ 1.56
MCF2L-201ENST00000261963 KIF1CO43896 1103 aaKnown RBP24.8■■□□□ 1.56
MCF2L-201ENST00000261963 TLR2O60603 784 aa24.8■■□□□ 1.56
MCF2L-201ENST00000261963 MOCS3O95396 460 aa24.8■■□□□ 1.56
MCF2L-201ENST00000261963 GNA14O95837 355 aa24.8■■□□□ 1.56
MCF2L-201ENST00000261963 CASP5P51878 434 aa24.8■■□□□ 1.56
MCF2L-201ENST00000261963 B4GALNT4Q76KP1 1039 aa24.8■■□□□ 1.56
MCF2L-201ENST00000261963 CABS1Q96KC9 395 aa24.8■■□□□ 1.56
MCF2L-201ENST00000261963 JADE2Q9NQC1 790 aa24.8■■□□□ 1.56
MCF2L-201ENST00000261963 ATXN2Q99700 1313 aaKnown RBP24.79■■□□□ 1.56
MCF2L-201ENST00000261963 H0YIN7 160 aa24.79■■□□□ 1.56
MCF2L-201ENST00000261963 BMP3P12645 472 aa24.79■■□□□ 1.56
MCF2L-201ENST00000261963 IKQ13123 557 aaPredicted RBP24.79■■□□□ 1.56
MCF2L-201ENST00000261963 GIT2Q14161 759 aa24.79■■□□□ 1.56
MCF2L-201ENST00000261963 FAM83BQ5T0W9 1011 aa24.79■■□□□ 1.56
MCF2L-201ENST00000261963 CCDC70Q6NSX1 233 aa24.79■■□□□ 1.56
MCF2L-201ENST00000261963 BTNL9Q6UXG8 535 aa24.79■■□□□ 1.56
MCF2L-201ENST00000261963 AENQ8WTP8 325 aaKnown RBP24.79■■□□□ 1.56
MCF2L-201ENST00000261963 SH3GL2Q99962 352 aa24.79■■□□□ 1.56
MCF2L-201ENST00000261963 LSM14BQ9BX40 385 aaKnown RBP24.79■■□□□ 1.56
MCF2L-201ENST00000261963 SALL4Q9UJQ4 1053 aa24.79■■□□□ 1.56
MCF2L-201ENST00000261963 SNX12Q9UMY4 172 aa24.79■■□□□ 1.56
MCF2L-201ENST00000261963 SAMM50Q9Y512 469 aa24.79■■□□□ 1.56
MCF2L-201ENST00000261963 SSU72P8A0A1W2PR75 194 aa24.78■■□□□ 1.56
MCF2L-201ENST00000261963 SPDYE3A6NKU9 549 aa24.78■■□□□ 1.56
MCF2L-201ENST00000261963 PJA2O43164 708 aa24.78■■□□□ 1.56
MCF2L-201ENST00000261963 TACC1O75410 805 aa24.78■■□□□ 1.56
MCF2L-201ENST00000261963 FOSP01100 380 aaPredicted RBP24.78■■□□□ 1.56
MCF2L-201ENST00000261963 KRT18P05783 430 aaKnown RBP24.78■■□□□ 1.56
MCF2L-201ENST00000261963 RPA1P27694 616 aa24.78■■□□□ 1.56
MCF2L-201ENST00000261963 APBA1Q02410 837 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms