RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 USP17L3A6NCW0 530 aa17.57■□□□□ 0.4
SREBF1-201ENST00000261646 USP17L4A6NCW7 530 aa17.57■□□□□ 0.4
SREBF1-201ENST00000261646 USP17L1Q7RTZ2 530 aa17.57■□□□□ 0.4
SREBF1-201ENST00000261646 GPR101Q96P66 508 aaPredicted RBP17.57■□□□□ 0.4
SREBF1-201ENST00000261646 TRIM9Q9C026 710 aa17.57■□□□□ 0.4
SREBF1-201ENST00000261646 ECT2Q9H8V3 914 aa17.57■□□□□ 0.4
SREBF1-201ENST00000261646 CFAP73A6NFT4 308 aa17.57■□□□□ 0.4
SREBF1-201ENST00000261646 SKIP12755 728 aa17.57■□□□□ 0.4
SREBF1-201ENST00000261646 HERVK_113P62684 666 aa17.57■□□□□ 0.4
SREBF1-201ENST00000261646 SGO2Q562F6 1265 aa17.57■□□□□ 0.4
SREBF1-201ENST00000261646 SDCCAG8Q86SQ7 713 aaPredicted RBP17.57■□□□□ 0.4
SREBF1-201ENST00000261646 BMP6P22004 513 aa17.56■□□□□ 0.4
SREBF1-201ENST00000261646 SCP2P22307 547 aa17.56■□□□□ 0.4
SREBF1-201ENST00000261646 IL6STP40189 918 aaPredicted RBP17.56■□□□□ 0.4
SREBF1-201ENST00000261646 SEPT2Q15019 361 aa17.56■□□□□ 0.4
SREBF1-201ENST00000261646 DIXDC1Q155Q3 683 aa17.56■□□□□ 0.4
SREBF1-201ENST00000261646 KDM7AQ6ZMT4 941 aa17.56■□□□□ 0.4
SREBF1-201ENST00000261646 CTAGE3PQ8IX95 158 aa17.56■□□□□ 0.4
SREBF1-201ENST00000261646 FAM178BQ8IXR5 827 aa17.56■□□□□ 0.4
SREBF1-201ENST00000261646 NYXQ9GZU5 481 aa17.56■□□□□ 0.4
SREBF1-201ENST00000261646 GOLPH3Q9H4A6 298 aa17.56■□□□□ 0.4
SREBF1-201ENST00000261646 INTUQ9ULD6 942 aa17.56■□□□□ 0.4
SREBF1-201ENST00000261646 I3L4J1 428 aa17.56■□□□□ 0.4
SREBF1-201ENST00000261646 TTI1O43156 1089 aa17.56■□□□□ 0.4
SREBF1-201ENST00000261646 STRN3Q13033 797 aa17.56■□□□□ 0.4
SREBF1-201ENST00000261646 PSMD2Q13200 908 aa17.56■□□□□ 0.4
SREBF1-201ENST00000261646 MAP7Q14244 749 aa17.56■□□□□ 0.4
SREBF1-201ENST00000261646 LIN9Q5TKA1 542 aa17.56■□□□□ 0.4
SREBF1-201ENST00000261646 MDM1Q8TC05 714 aa17.56■□□□□ 0.4
SREBF1-201ENST00000261646 PHF20Q9BVI0 1012 aa17.56■□□□□ 0.4
SREBF1-201ENST00000261646 ZC3H12CQ9C0D7 883 aaKnown RBP17.56■□□□□ 0.4
SREBF1-201ENST00000261646 CCNL1Q9UK58 526 aaPredicted RBP17.56■□□□□ 0.4
SREBF1-201ENST00000261646 TECPR2O15040 1411 aa17.56■□□□□ 0.4
SREBF1-201ENST00000261646 UTYO14607 1347 aa17.56■□□□□ 0.4
SREBF1-201ENST00000261646 MEIS1O00470 390 aa17.55■□□□□ 0.4
SREBF1-201ENST00000261646 SYF2O95926 243 aaKnown RBP17.55■□□□□ 0.4
SREBF1-201ENST00000261646 RCAN1P53805 252 aa17.55■□□□□ 0.4
SREBF1-201ENST00000261646 KCNH2Q12809 1159 aa17.55■□□□□ 0.4
SREBF1-201ENST00000261646 CFAP157Q5JU67 520 aa17.55■□□□□ 0.4
SREBF1-201ENST00000261646 FAM186BQ8IYM0 893 aa17.55■□□□□ 0.4
SREBF1-201ENST00000261646 NSMCE1Q8WV22 266 aa17.55■□□□□ 0.4
SREBF1-201ENST00000261646 GLT8D2Q9H1C3 349 aa17.55■□□□□ 0.4
SREBF1-201ENST00000261646 DDX39AO00148 427 aaKnown RBP17.55■□□□□ 0.4
SREBF1-201ENST00000261646 MSH2P43246 934 aa17.55■□□□□ 0.4
SREBF1-201ENST00000261646 SEPT14Q6ZU15 432 aa17.55■□□□□ 0.4
SREBF1-201ENST00000261646 GRK7Q8WTQ7 553 aa17.55■□□□□ 0.4
SREBF1-201ENST00000261646 XPO6Q96QU8 1125 aaKnown RBP17.55■□□□□ 0.4
SREBF1-201ENST00000261646 ZNF148Q9UQR1 794 aa17.55■□□□□ 0.4
SREBF1-201ENST00000261646 NEURL4Q96JN8 1562 aa17.55■□□□□ 0.4
SREBF1-201ENST00000261646 WDR91A4D1P6 747 aa17.55■□□□□ 0.4
SREBF1-201ENST00000261646 CHN1P15882 459 aa17.55■□□□□ 0.4
SREBF1-201ENST00000261646 AARSP49588 968 aaKnown RBP eCLIP17.55■□□□□ 0.44e-6■■■□□ 17.5
SREBF1-201ENST00000261646 WDR44Q5JSH3 913 aa17.55■□□□□ 0.4
SREBF1-201ENST00000261646 SRRM1Q8IYB3 904 aaKnown RBP17.55■□□□□ 0.4
SREBF1-201ENST00000261646 DONSONQ9NYP3 566 aa17.55■□□□□ 0.4
SREBF1-201ENST00000261646 USP32Q8NFA0 1604 aa17.55■□□□□ 0.4
SREBF1-201ENST00000261646 HSPA6P17066 643 aa17.54■□□□□ 0.4
SREBF1-201ENST00000261646 CDC37Q16543 378 aaPredicted RBP17.54■□□□□ 0.4
SREBF1-201ENST00000261646 GUF1Q8N442 669 aaKnown RBP17.54■□□□□ 0.4
SREBF1-201ENST00000261646 SRBD1Q8N5C6 995 aaKnown RBP17.54■□□□□ 0.4
SREBF1-201ENST00000261646 CNBD1Q8NA66 436 aa17.54■□□□□ 0.4
SREBF1-201ENST00000261646 FNBP1Q96RU3 617 aa17.54■□□□□ 0.4
SREBF1-201ENST00000261646 ATF7P17544 494 aaPredicted RBP17.54■□□□□ 0.4
SREBF1-201ENST00000261646 CA4P22748 312 aa17.54■□□□□ 0.4
SREBF1-201ENST00000261646 KLRC1P26715 233 aa17.54■□□□□ 0.4
SREBF1-201ENST00000261646 TRAF1Q13077 416 aa17.54■□□□□ 0.4
SREBF1-201ENST00000261646 PPP1R21Q6ZMI0 780 aa17.54■□□□□ 0.4
SREBF1-201ENST00000261646 CCDC127Q96BQ5 260 aa17.54■□□□□ 0.4
SREBF1-201ENST00000261646 DNAJC7Q99615 494 aa17.54■□□□□ 0.4
SREBF1-201ENST00000261646 NOD2Q9HC29 1040 aa17.54■□□□□ 0.4
SREBF1-201ENST00000261646 ANAPC5Q9UJX4 755 aa17.54■□□□□ 0.4
SREBF1-201ENST00000261646 XDHP47989 1333 aa17.54■□□□□ 0.4
SREBF1-201ENST00000261646 PRPF6O94906 941 aaKnown RBP17.54■□□□□ 0.4
SREBF1-201ENST00000261646 TCP10Q12799 353 aa17.54■□□□□ 0.4
SREBF1-201ENST00000261646 BYSLQ13895 437 aaKnown RBP17.54■□□□□ 0.4
SREBF1-201ENST00000261646 DCUN1D2Q6PH85 259 aa17.54■□□□□ 0.4
SREBF1-201ENST00000261646 DPH6Q7L8W6 267 aa17.54■□□□□ 0.4
SREBF1-201ENST00000261646 MTA3Q9BTC8 594 aa17.54■□□□□ 0.4
SREBF1-201ENST00000261646 OSBPL1AQ9BXW6 950 aa17.54■□□□□ 0.4
SREBF1-201ENST00000261646 VCPKMTQ9H867 229 aa17.54■□□□□ 0.4
SREBF1-201ENST00000261646 BATF3Q9NR55 127 aa17.54■□□□□ 0.4
SREBF1-201ENST00000261646 SALL1Q9NSC2 1324 aa17.54■□□□□ 0.4
SREBF1-201ENST00000261646 PXDNQ92626 1479 aa17.54■□□□□ 0.4
SREBF1-201ENST00000261646 RHOBTB3O94955 611 aa17.54■□□□□ 0.4
SREBF1-201ENST00000261646 PLA2G4BP0C869 781 aa17.54■□□□□ 0.4
SREBF1-201ENST00000261646 PRDX5P30044 214 aa17.54■□□□□ 0.4
SREBF1-201ENST00000261646 KIF2BQ8N4N8 673 aa17.54■□□□□ 0.4
SREBF1-201ENST00000261646 TXNDC16Q9P2K2 825 aa17.54■□□□□ 0.4
SREBF1-201ENST00000261646 PDS5AQ29RF7 1337 aaKnown RBP17.53■□□□□ 0.4
SREBF1-201ENST00000261646 PVALEFA0A1B0GWK0 134 aa17.53■□□□□ 0.4
SREBF1-201ENST00000261646 ZSCAN5CA6NGD5 496 aaPredicted RBP17.53■□□□□ 0.4
SREBF1-201ENST00000261646 ABL1P00519 1130 aa17.53■□□□□ 0.4
SREBF1-201ENST00000261646 PDHBP11177 359 aa17.53■□□□□ 0.4
SREBF1-201ENST00000261646 BRAFP15056 766 aa17.53■□□□□ 0.4
SREBF1-201ENST00000261646 RAD23BP54727 409 aa17.53■□□□□ 0.4
SREBF1-201ENST00000261646 IRX1P78414 480 aaPredicted RBP17.53■□□□□ 0.4
SREBF1-201ENST00000261646 PRMT1Q99873 361 aaKnown RBP17.53■□□□□ 0.4
SREBF1-201ENST00000261646 TRIM51Q9BSJ1 452 aa17.53■□□□□ 0.4
SREBF1-201ENST00000261646 SPZ1Q9BXG8 430 aa17.53■□□□□ 0.4
SREBF1-201ENST00000261646 PLAGL2Q9UPG8 496 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms