RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 FLOT1O75955 427 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 PHKG2P15735 406 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 GBP1P32455 592 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 PHKA1P46020 1223 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 USP11P51784 963 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 ARID5AQ03989 594 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 BNIP1Q12981 228 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 SLC18A3Q16572 532 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 GALNTL6Q49A17 601 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 IFIT1BQ5T764 474 aaKnown RBP7.88□□□□□ -1.15
CSDE1-201ENST00000261443 DZIP3Q86Y13 1208 aaKnown RBP7.88□□□□□ -1.15
CSDE1-201ENST00000261443 ESR2Q92731 530 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 EZH1Q92800 747 aaPredicted RBP7.88□□□□□ -1.15
CSDE1-201ENST00000261443 HPS3Q969F9 1004 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.88□□□□□ -1.15
CSDE1-201ENST00000261443 PACSIN1Q9BY11 444 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 EDEM3Q9BZQ6 932 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 ADAM7Q9H2U9 754 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 RGL1Q9NZL6 768 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 ANKIB1Q9P2G1 1089 aa7.88□□□□□ -1.15
CSDE1-201ENST00000261443 NOC2LQ9Y3T9 749 aaKnown RBP7.88□□□□□ -1.15
CSDE1-201ENST00000261443 SPDYE3A6NKU9 549 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 CCDC169A6NNP5 214 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 MINDY4BA8MYZ0 360 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 ADAMTS3O15072 1205 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 PPFIA2O75334 1257 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 SUN1O94901 812 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 FGFR1OPO95684 399 aaKnown RBP7.87□□□□□ -1.15
CSDE1-201ENST00000261443 PDHA1P08559 390 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 ITGA4P13612 1032 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 ZC3H6P61129 1189 aaKnown RBP7.87□□□□□ -1.15
CSDE1-201ENST00000261443 MRPS35P82673 323 aaKnown RBP7.87□□□□□ -1.15
CSDE1-201ENST00000261443 ANO7Q6IWH7 933 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 CNNM4Q6P4Q7 775 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 MTHFD1LQ6UB35 978 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 PROSER2Q86WR7 435 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-201ENST00000261443 ENAHQ8N8S7 591 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-201ENST00000261443 CABLES1Q8TDN4 633 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 FBF1Q8TES7 1133 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 PGM2Q96G03 612 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 CELF4Q9BZC1 486 aaKnown RBP7.87□□□□□ -1.15
CSDE1-201ENST00000261443 TRIM9Q9C026 710 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 GOLPH3Q9H4A6 298 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 SLITRK6Q9H5Y7 841 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 AZI2Q9H6S1 392 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 ADAMTS1Q9UHI8 967 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 ATP6V0A2Q9Y487 856 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 TIAM2Q8IVF5 1701 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 A0A087X0T9 212 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 TLR2O60603 784 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 FAM228BP0C875 321 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 PLCG1P19174 1290 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 CNGA1P29973 690 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 IFI35P80217 286 aaPredicted RBP7.87□□□□□ -1.15
CSDE1-201ENST00000261443 PPP1R15BQ5SWA1 713 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 DENND2CQ68D51 928 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 CNBD1Q8NA66 436 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 B4GALNT2Q8NHY0 566 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 DYDC1Q8WWB3 177 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 NLRP3Q96P20 1036 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 CCSER1Q9C0I3 900 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 ZMYND12Q9H0C1 365 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 CCDC113Q9H0I3 377 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 CCDC134Q9H6E4 229 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 PIDD1Q9HB75 910 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 CNNM1Q9NRU3 951 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 CEP72Q9P209 647 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 PNMA3Q9UL41 463 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 TRIM33Q9UPN9 1127 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 C2CD2Q9Y426 696 aa7.87□□□□□ -1.15
CSDE1-201ENST00000261443 NPTXRO95502 500 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 PYGLP06737 847 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 UQCRFS1P1P0C7P4 283 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 SCG2P13521 617 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 GNAT2P19087 354 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 ALDH3A1P30838 453 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 SPDYCQ5MJ68 293 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 FAM83BQ5T0W9 1011 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 CENPPQ6IPU0 288 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 TMTC3Q6ZXV5 915 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 APLFQ8IW19 511 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-201ENST00000261443 LCORLQ8N3X6 602 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 METTL13Q8N6R0 699 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 KIAA0895Q8NCT3 520 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 LRRC15Q8TF66 581 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 ZFAND2BQ8WV99 257 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 ZSCAN10Q96SZ4 725 aaPredicted RBP7.86□□□□□ -1.15
CSDE1-201ENST00000261443 LRRC42Q9Y546 428 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 RIC1Q4ADV7 1423 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 WFS1O76024 890 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 CALM1P0DP23 149 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 CALM2P0DP24 149 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 CALM3P0DP25 149 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 RANBP1P43487 201 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 TUBP50607 506 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 PMS2P54278 862 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 POLR2FP61218 127 aaKnown RBP7.86□□□□□ -1.15
CSDE1-201ENST00000261443 KLHL30Q0D2K2 578 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 RAPGEF1Q13905 1077 aa7.86□□□□□ -1.15
CSDE1-201ENST00000261443 ASRGL1Q7L266 308 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms