RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 GRB10Q13322 594 aa17.73■□□□□ 0.43
CCDC90B-201ENST00000260054 CTTNQ14247 550 aaKnown RBP17.73■□□□□ 0.43
CCDC90B-201ENST00000260054 ZRSR1Q15695 479 aaKnown RBP17.73■□□□□ 0.43
CCDC90B-201ENST00000260054 LHX8Q68G74 356 aa17.73■□□□□ 0.43
CCDC90B-201ENST00000260054 POTEBQ6S5H4 581 aa17.73■□□□□ 0.43
CCDC90B-201ENST00000260054 PNMA5Q96PV4 448 aa17.73■□□□□ 0.43
CCDC90B-201ENST00000260054 PANK2Q9BZ23 570 aa17.73■□□□□ 0.43
CCDC90B-201ENST00000260054 XPNPEP3Q9NQH7 507 aa17.73■□□□□ 0.43
CCDC90B-201ENST00000260054 FAM13BQ9NYF5 915 aa17.73■□□□□ 0.43
CCDC90B-201ENST00000260054 GABBR1Q9UBS5 961 aa17.73■□□□□ 0.43
CCDC90B-201ENST00000260054 STK24Q9Y6E0 443 aa17.73■□□□□ 0.43
CCDC90B-201ENST00000260054 DDX11L8A8MPP1 907 aa17.72■□□□□ 0.43
CCDC90B-201ENST00000260054 BACH1O14867 736 aa17.72■□□□□ 0.43
CCDC90B-201ENST00000260054 MSCO60682 206 aa17.72■□□□□ 0.43
CCDC90B-201ENST00000260054 ADAMTS4O75173 837 aa17.72■□□□□ 0.43
CCDC90B-201ENST00000260054 P4HBP07237 508 aaKnown RBP17.72■□□□□ 0.43
CCDC90B-201ENST00000260054 C6orf222P0C671 652 aaPredicted RBP17.72■□□□□ 0.43
CCDC90B-201ENST00000260054 LIG1P18858 919 aa17.72■□□□□ 0.43
CCDC90B-201ENST00000260054 TXLNAP40222 546 aa17.72■□□□□ 0.43
CCDC90B-201ENST00000260054 BEX3Q00994 111 aa17.72■□□□□ 0.43
CCDC90B-201ENST00000260054 HYIQ5T013 277 aa17.72■□□□□ 0.43
CCDC90B-201ENST00000260054 TRIM50Q86XT4 487 aa17.72■□□□□ 0.43
CCDC90B-201ENST00000260054 TPH2Q8IWU9 490 aa17.72■□□□□ 0.43
CCDC90B-201ENST00000260054 PDILTQ8N807 584 aa17.72■□□□□ 0.43
CCDC90B-201ENST00000260054 NEK9Q8TD19 979 aa17.72■□□□□ 0.43
CCDC90B-201ENST00000260054 ARMC5Q96C12 935 aa17.72■□□□□ 0.43
CCDC90B-201ENST00000260054 ZNF333Q96JL9 665 aa17.72■□□□□ 0.43
CCDC90B-201ENST00000260054 PLIN2Q99541 437 aa17.72■□□□□ 0.43
CCDC90B-201ENST00000260054 LXNQ9BS40 222 aa17.72■□□□□ 0.43
CCDC90B-201ENST00000260054 TUFT1Q9NNX1 390 aa17.72■□□□□ 0.43
CCDC90B-201ENST00000260054 PAK6Q9NQU5 681 aaPredicted RBP17.72■□□□□ 0.43
CCDC90B-201ENST00000260054 KCNH3Q9ULD8 1083 aa17.72■□□□□ 0.43
CCDC90B-201ENST00000260054 IGSF9BQ9UPX0 1349 aa17.72■□□□□ 0.43
CCDC90B-201ENST00000260054 PPFIA4O75335 1185 aa17.71■□□□□ 0.43
CCDC90B-201ENST00000260054 LGR5O75473 907 aa17.71■□□□□ 0.43
CCDC90B-201ENST00000260054 CCL5P13501 91 aa17.71■□□□□ 0.43
CCDC90B-201ENST00000260054 QARSP47897 775 aaKnown RBP17.71■□□□□ 0.43
CCDC90B-201ENST00000260054 CPT1AP50416 773 aa17.71■□□□□ 0.43
CCDC90B-201ENST00000260054 NKX3-2P78367 333 aa17.71■□□□□ 0.43
CCDC90B-201ENST00000260054 NFKBIBQ15653 356 aa17.71■□□□□ 0.43
CCDC90B-201ENST00000260054 FSCN1Q16658 493 aaKnown RBP17.71■□□□□ 0.43
CCDC90B-201ENST00000260054 UTP14CQ5TAP6 766 aaKnown RBP17.71■□□□□ 0.43
CCDC90B-201ENST00000260054 POTEGQ6S5H5 508 aa17.71■□□□□ 0.43
CCDC90B-201ENST00000260054 LRRC15Q8TF66 581 aa17.71■□□□□ 0.43
CCDC90B-201ENST00000260054 ZNF302Q9NR11 478 aa17.71■□□□□ 0.43
CCDC90B-201ENST00000260054 MAFBQ9Y5Q3 323 aaPredicted RBP17.71■□□□□ 0.43
CCDC90B-201ENST00000260054 EMSYQ7Z589 1322 aa17.71■□□□□ 0.43
CCDC90B-201ENST00000260054 ZNF862O60290 1169 aa17.71■□□□□ 0.42
CCDC90B-201ENST00000260054 LGALS2P05162 132 aa17.71■□□□□ 0.42
CCDC90B-201ENST00000260054 PLCG1P19174 1290 aa17.71■□□□□ 0.42
CCDC90B-201ENST00000260054 PSMC5P62195 406 aa17.71■□□□□ 0.42
CCDC90B-201ENST00000260054 DGKDQ16760 1214 aa17.71■□□□□ 0.42
CCDC90B-201ENST00000260054 TMEM119Q4V9L6 283 aa17.71■□□□□ 0.42
CCDC90B-201ENST00000260054 KCNK18Q7Z418 384 aa17.71■□□□□ 0.42
CCDC90B-201ENST00000260054 ENGASEQ8NFI3 743 aa17.71■□□□□ 0.42
CCDC90B-201ENST00000260054 RASSF8Q8NHQ8 419 aa17.71■□□□□ 0.42
CCDC90B-201ENST00000260054 AFAP1L1Q8TED9 768 aa17.71■□□□□ 0.42
CCDC90B-201ENST00000260054 CALML4Q96GE6 196 aa17.71■□□□□ 0.42
CCDC90B-201ENST00000260054 RNF208Q9H0X6 261 aa17.71■□□□□ 0.42
CCDC90B-201ENST00000260054 ZSWIM4Q9H7M6 989 aa17.71■□□□□ 0.42
CCDC90B-201ENST00000260054 DDX19AQ9NUU7 478 aaKnown RBP17.71■□□□□ 0.42
CCDC90B-201ENST00000260054 CCDC39Q9UFE4 941 aa17.71■□□□□ 0.42
CCDC90B-201ENST00000260054 KIAA1024Q9UPX6 916 aa17.71■□□□□ 0.42
CCDC90B-201ENST00000260054 KDM3AQ9Y4C1 1321 aa17.7■□□□□ 0.42
CCDC90B-201ENST00000260054 A0A087WWV3 80 aa17.7■□□□□ 0.42
CCDC90B-201ENST00000260054 POLR2DO15514 142 aaKnown RBP17.7■□□□□ 0.42
CCDC90B-201ENST00000260054 SLC26A4O43511 780 aa17.7■□□□□ 0.42
CCDC90B-201ENST00000260054 ZNF286BP0CG31 522 aa17.7■□□□□ 0.42
CCDC90B-201ENST00000260054 ATP4AP20648 1035 aa17.7■□□□□ 0.42
CCDC90B-201ENST00000260054 STAT5BP51692 787 aa17.7■□□□□ 0.42
CCDC90B-201ENST00000260054 SNW1Q13573 536 aaKnown RBP17.7■□□□□ 0.42
CCDC90B-201ENST00000260054 E2F4Q16254 413 aa17.7■□□□□ 0.42
CCDC90B-201ENST00000260054 CCDC73Q6ZRK6 1079 aa17.7■□□□□ 0.42
CCDC90B-201ENST00000260054 GPT2Q8TD30 523 aa17.7■□□□□ 0.42
CCDC90B-201ENST00000260054 ATP6V0A1Q93050 837 aa17.7■□□□□ 0.42
CCDC90B-201ENST00000260054 CDK5RAP3Q96JB5 506 aa17.7■□□□□ 0.42
CCDC90B-201ENST00000260054 C16orf70Q9BSU1 422 aa17.7■□□□□ 0.42
CCDC90B-201ENST00000260054 MCOLN1Q9GZU1 580 aa17.7■□□□□ 0.42
CCDC90B-201ENST00000260054 AZI2Q9H6S1 392 aa17.7■□□□□ 0.42
CCDC90B-201ENST00000260054 SPC25Q9HBM1 224 aa17.7■□□□□ 0.42
CCDC90B-201ENST00000260054 WDR81Q562E7 1941 aa17.69■□□□□ 0.42
CCDC90B-201ENST00000260054 ZBTB39O15060 712 aa17.69■□□□□ 0.42
CCDC90B-201ENST00000260054 NR1I2O75469 434 aa17.69■□□□□ 0.42
CCDC90B-201ENST00000260054 MUTP22033 750 aa17.69■□□□□ 0.42
CCDC90B-201ENST00000260054 SYKP43405 635 aa17.69■□□□□ 0.42
CCDC90B-201ENST00000260054 PSMC6P62333 389 aa17.69■□□□□ 0.42
CCDC90B-201ENST00000260054 FAM160A1Q05DH4 1040 aa17.69■□□□□ 0.42
CCDC90B-201ENST00000260054 NAALADL2Q58DX5 795 aa17.69■□□□□ 0.42
CCDC90B-201ENST00000260054 BRDTQ58F21 947 aaPredicted RBP17.69■□□□□ 0.42
CCDC90B-201ENST00000260054 GNASQ5JWF2 1037 aa17.69■□□□□ 0.42
CCDC90B-201ENST00000260054 FAM160B1Q5W0V3 765 aa17.69■□□□□ 0.42
CCDC90B-201ENST00000260054 PDXDC2PQ6P474 469 aa17.69■□□□□ 0.42
CCDC90B-201ENST00000260054 C4orf19Q8IY42 314 aa17.69■□□□□ 0.42
CCDC90B-201ENST00000260054 FMR1NBQ8N0W7 255 aaPredicted RBP17.69■□□□□ 0.42
CCDC90B-201ENST00000260054 KLHDC9Q8NEP7 349 aa17.69■□□□□ 0.42
CCDC90B-201ENST00000260054 GLG1Q92896 1179 aa17.69■□□□□ 0.42
CCDC90B-201ENST00000260054 DHX58Q96C10 678 aa17.69■□□□□ 0.42
CCDC90B-201ENST00000260054 NT5C3AQ9H0P0 336 aa17.69■□□□□ 0.42
CCDC90B-201ENST00000260054 STBD1O95210 358 aa17.68■□□□□ 0.42
CCDC90B-201ENST00000260054 LYPLA2O95372 231 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms