RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 MTG1Q9BT17 334 aaPredicted RBP15.86■□□□□ 0.13
VPS25-201ENST00000253794 POLR3CQ9BUI4 534 aaPredicted RBP15.86■□□□□ 0.13
VPS25-201ENST00000253794 SEZ6LQ9BYH1 1024 aa15.86■□□□□ 0.13
VPS25-201ENST00000253794 SMARCAD1Q9H4L7 1026 aa15.86■□□□□ 0.13
VPS25-201ENST00000253794 LRWD1Q9UFC0 647 aa15.86■□□□□ 0.13
VPS25-201ENST00000253794 SCN10AQ9Y5Y9 1956 aa15.86■□□□□ 0.13
VPS25-201ENST00000253794 P4HBP07237 508 aaKnown RBP15.85■□□□□ 0.13
VPS25-201ENST00000253794 RPA1P27694 616 aa15.85■□□□□ 0.13
VPS25-201ENST00000253794 MARCKSP29966 332 aaPredicted RBP15.85■□□□□ 0.13
VPS25-201ENST00000253794 HYIQ5T013 277 aa15.85■□□□□ 0.13
VPS25-201ENST00000253794 AXDND1Q5T1B0 1012 aaPredicted RBP15.85■□□□□ 0.13
VPS25-201ENST00000253794 FAM160B1Q5W0V3 765 aa15.85■□□□□ 0.13
VPS25-201ENST00000253794 HAUS3Q68CZ6 603 aa15.85■□□□□ 0.13
VPS25-201ENST00000253794 NCAPH2Q6IBW4 605 aa15.85■□□□□ 0.13
VPS25-201ENST00000253794 SLC43A3Q8NBI5 491 aa15.85■□□□□ 0.13
VPS25-201ENST00000253794 CHAMP1Q96JM3 812 aa15.85■□□□□ 0.13
VPS25-201ENST00000253794 EIF2AK1Q9BQI3 630 aaKnown RBP15.85■□□□□ 0.13
VPS25-201ENST00000253794 KATNAL1Q9BW62 490 aa15.85■□□□□ 0.13
VPS25-201ENST00000253794 AZI2Q9H6S1 392 aa15.85■□□□□ 0.13
VPS25-201ENST00000253794 TUFT1Q9NNX1 390 aa15.85■□□□□ 0.13
VPS25-201ENST00000253794 ZNF302Q9NR11 478 aa15.85■□□□□ 0.13
VPS25-201ENST00000253794 ERAP1Q9NZ08 941 aa15.85■□□□□ 0.13
VPS25-201ENST00000253794 ZNF215Q9UL58 517 aaPredicted RBP15.85■□□□□ 0.13
VPS25-201ENST00000253794 A0A1W2PQ45 241 aaPredicted RBP15.84■□□□□ 0.13
VPS25-201ENST00000253794 A0A1W2PQY0 241 aa15.84■□□□□ 0.13
VPS25-201ENST00000253794 H3BRB1 525 aa15.84■□□□□ 0.13
VPS25-201ENST00000253794 DKC1O60832 514 aaKnown RBP eCLIP15.84■□□□□ 0.13
VPS25-201ENST00000253794 CUTAO60888 179 aa15.84■□□□□ 0.13
VPS25-201ENST00000253794 SLITRK3O94933 977 aa15.84■□□□□ 0.13
VPS25-201ENST00000253794 MYL3P08590 195 aa15.84■□□□□ 0.13
VPS25-201ENST00000253794 ZNF286BP0CG31 522 aa15.84■□□□□ 0.13
VPS25-201ENST00000253794 SPATA31C1P0DKV0 1188 aa15.84■□□□□ 0.13
VPS25-201ENST00000253794 QARSP47897 775 aaKnown RBP15.84■□□□□ 0.13
VPS25-201ENST00000253794 STAT5BP51692 787 aa15.84■□□□□ 0.13
VPS25-201ENST00000253794 PSMC5P62195 406 aa15.84■□□□□ 0.13
VPS25-201ENST00000253794 GRIN1Q05586 938 aa15.84■□□□□ 0.13
VPS25-201ENST00000253794 SWSAP1Q6NVH7 229 aa15.84■□□□□ 0.13
VPS25-201ENST00000253794 CXCL17Q6UXB2 119 aa15.84■□□□□ 0.13
VPS25-201ENST00000253794 SESTD1Q86VW0 696 aa15.84■□□□□ 0.13
VPS25-201ENST00000253794 C4orf19Q8IY42 314 aa15.84■□□□□ 0.13
VPS25-201ENST00000253794 TMEM87AQ8NBN3 555 aa15.84■□□□□ 0.13
VPS25-201ENST00000253794 ERMNQ8TAM6 284 aa15.84■□□□□ 0.13
VPS25-201ENST00000253794 ATP6V0A1Q93050 837 aa15.84■□□□□ 0.13
VPS25-201ENST00000253794 SPATA32Q96LK8 384 aa15.84■□□□□ 0.13
VPS25-201ENST00000253794 MMTAG2Q9BU76 263 aaKnown RBP15.84■□□□□ 0.13
VPS25-201ENST00000253794 CSRNP2Q9H175 543 aa15.84■□□□□ 0.13
VPS25-201ENST00000253794 TUT1Q9H6E5 874 aaKnown RBP15.84■□□□□ 0.13
VPS25-201ENST00000253794 SAMM50Q9Y512 469 aa15.84■□□□□ 0.13
VPS25-201ENST00000253794 ZNF862O60290 1169 aa15.83■□□□□ 0.12
VPS25-201ENST00000253794 STBD1O95210 358 aa15.83■□□□□ 0.12
VPS25-201ENST00000253794 ATP4AP20648 1035 aa15.83■□□□□ 0.12
VPS25-201ENST00000253794 HOXC8P31273 242 aa15.83■□□□□ 0.12
VPS25-201ENST00000253794 PSEN2P49810 448 aa15.83■□□□□ 0.12
VPS25-201ENST00000253794 UGCGQ16739 394 aa15.83■□□□□ 0.12
VPS25-201ENST00000253794 C1orf53Q5VUE5 145 aa15.83■□□□□ 0.12
VPS25-201ENST00000253794 TRIM50Q86XT4 487 aa15.83■□□□□ 0.12
VPS25-201ENST00000253794 FAM167AQ96KS9 214 aa15.83■□□□□ 0.12
VPS25-201ENST00000253794 GLT1D1Q96MS3 346 aa15.83■□□□□ 0.12
VPS25-201ENST00000253794 LXNQ9BS40 222 aa15.83■□□□□ 0.12
VPS25-201ENST00000253794 CCSER1Q9C0I3 900 aa15.83■□□□□ 0.12
VPS25-201ENST00000253794 ZSWIM4Q9H7M6 989 aa15.83■□□□□ 0.12
VPS25-201ENST00000253794 GABBR1Q9UBS5 961 aa15.83■□□□□ 0.12
VPS25-201ENST00000253794 PCDHA7Q9UN72 937 aa15.83■□□□□ 0.12
VPS25-201ENST00000253794 BACH1O14867 736 aa15.82■□□□□ 0.12
VPS25-201ENST00000253794 MED24O75448 989 aa15.82■□□□□ 0.12
VPS25-201ENST00000253794 NCLP19338 710 aaKnown RBP15.82■□□□□ 0.12
VPS25-201ENST00000253794 PTPN11Q06124 597 aaPredicted RBP15.82■□□□□ 0.12
VPS25-201ENST00000253794 MFSD10Q14728 455 aa15.82■□□□□ 0.12
VPS25-201ENST00000253794 SNX17Q15036 470 aa15.82■□□□□ 0.12
VPS25-201ENST00000253794 PLCB4Q15147 1175 aa15.82■□□□□ 0.12
VPS25-201ENST00000253794 XKR3Q5GH77 459 aa15.82■□□□□ 0.12
VPS25-201ENST00000253794 UTP14CQ5TAP6 766 aaKnown RBP15.82■□□□□ 0.12
VPS25-201ENST00000253794 KRT79Q5XKE5 535 aa15.82■□□□□ 0.12
VPS25-201ENST00000253794 ADALQ6DHV7 355 aa15.82■□□□□ 0.12
VPS25-201ENST00000253794 PDXDC2PQ6P474 469 aa15.82■□□□□ 0.12
VPS25-201ENST00000253794 NFRKBQ6P4R8 1299 aa15.82■□□□□ 0.12
VPS25-201ENST00000253794 CATSPER3Q86XQ3 398 aa15.82■□□□□ 0.12
VPS25-201ENST00000253794 ATP8B4Q8TF62 1192 aa15.82■□□□□ 0.12
VPS25-201ENST00000253794 GLG1Q92896 1179 aa15.82■□□□□ 0.12
VPS25-201ENST00000253794 DYDC2Q96IM9 177 aa15.82■□□□□ 0.12
VPS25-201ENST00000253794 CLIC6Q96NY7 704 aa15.82■□□□□ 0.12
VPS25-201ENST00000253794 RGL1Q9NZL6 768 aa15.82■□□□□ 0.12
VPS25-201ENST00000253794 WRAP73Q9P2S5 460 aaPredicted RBP15.82■□□□□ 0.12
VPS25-201ENST00000253794 GRIN2DO15399 1336 aa15.82■□□□□ 0.12
VPS25-201ENST00000253794 A0A0U1RQG5 324 aaPredicted RBP15.81■□□□□ 0.12
VPS25-201ENST00000253794 FAM237AA0A1B0GTK4 181 aa15.81■□□□□ 0.12
VPS25-201ENST00000253794 A0A1W2PQ27 194 aa15.81■□□□□ 0.12
VPS25-201ENST00000253794 A0A1W2PQ64 194 aa15.81■□□□□ 0.12
VPS25-201ENST00000253794 A0A1W2PQD8 194 aa15.81■□□□□ 0.12
VPS25-201ENST00000253794 PP2D1A8MPX8 630 aa15.81■□□□□ 0.12
VPS25-201ENST00000253794 OATP04181 439 aa15.81■□□□□ 0.12
VPS25-201ENST00000253794 XRCC6P12956 609 aaKnown RBP eCLIP15.81■□□□□ 0.12
VPS25-201ENST00000253794 EN2P19622 333 aaPredicted RBP15.81■□□□□ 0.12
VPS25-201ENST00000253794 ME1P48163 572 aa15.81■□□□□ 0.12
VPS25-201ENST00000253794 PRKCEQ02156 737 aa15.81■□□□□ 0.12
VPS25-201ENST00000253794 KIAA0753Q2KHM9 967 aa15.81■□□□□ 0.12
VPS25-201ENST00000253794 BANK1Q8NDB2 785 aa15.81■□□□□ 0.12
VPS25-201ENST00000253794 SNX29Q8TEQ0 813 aa15.81■□□□□ 0.12
VPS25-201ENST00000253794 BBXQ8WY36 941 aaPredicted RBP15.81■□□□□ 0.12
VPS25-201ENST00000253794 STARD7Q9NQZ5 370 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms