RNA–Protein interactions for RNA: ENST00000252622.14

LSM7-201, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM7, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-201ENST00000252622 CKBP12277 381 aa28.4■■■□□ 2.14
LSM7-201ENST00000252622 GCFC2P16383 781 aaKnown RBP28.4■■■□□ 2.14
LSM7-201ENST00000252622 MCM2P49736 904 aa28.4■■■□□ 2.14
LSM7-201ENST00000252622 PPFIA1Q13136 1202 aa28.4■■■□□ 2.14
LSM7-201ENST00000252622 NR5A1Q13285 461 aa28.4■■■□□ 2.14
LSM7-201ENST00000252622 LETM2Q2VYF4 491 aa28.4■■■□□ 2.14
LSM7-201ENST00000252622 ZNF365Q70YC5 407 aa28.4■■■□□ 2.14
LSM7-201ENST00000252622 DIS3L2Q8IYB7 885 aaKnown RBP28.4■■■□□ 2.14
LSM7-201ENST00000252622 VWCEQ96DN2 955 aa28.4■■■□□ 2.14
LSM7-201ENST00000252622 NAP1L4Q99733 375 aaKnown RBP28.4■■■□□ 2.14
LSM7-201ENST00000252622 TREHO43280 583 aa28.39■■■□□ 2.14
LSM7-201ENST00000252622 PARNO95453 639 aaKnown RBP28.39■■■□□ 2.14
LSM7-201ENST00000252622 RASIP1Q5U651 963 aa28.39■■■□□ 2.14
LSM7-201ENST00000252622 FAM160B1Q5W0V3 765 aa28.39■■■□□ 2.14
LSM7-201ENST00000252622 PPP4R3AQ6IN85 833 aa28.39■■■□□ 2.14
LSM7-201ENST00000252622 LRRC8DQ7L1W4 858 aa28.39■■■□□ 2.14
LSM7-201ENST00000252622 TNPO1Q92973 898 aaKnown RBP28.39■■■□□ 2.14
LSM7-201ENST00000252622 DDX25Q9UHL0 483 aaKnown RBP28.39■■■□□ 2.14
LSM7-201ENST00000252622 BACH1O14867 736 aa28.38■■■□□ 2.13
LSM7-201ENST00000252622 CAND2O75155 1236 aa28.38■■■□□ 2.13
LSM7-201ENST00000252622 CD2BP2O95400 341 aaKnown RBP28.38■■■□□ 2.13
LSM7-201ENST00000252622 FGBP02675 491 aa28.38■■■□□ 2.13
LSM7-201ENST00000252622 FOSBP53539 338 aa28.38■■■□□ 2.13
LSM7-201ENST00000252622 PLCB4Q15147 1175 aa28.38■■■□□ 2.13
LSM7-201ENST00000252622 GRIK4Q16099 956 aa28.38■■■□□ 2.13
LSM7-201ENST00000252622 EARS2Q5JPH6 523 aaKnown RBP28.38■■■□□ 2.13
LSM7-201ENST00000252622 LRCH2Q5VUJ6 765 aa28.38■■■□□ 2.13
LSM7-201ENST00000252622 CCDC60Q8IWA6 550 aaPredicted RBP28.38■■■□□ 2.13
LSM7-201ENST00000252622 ETNPPLQ8TBG4 499 aa28.38■■■□□ 2.13
LSM7-201ENST00000252622 HERVK_113Q902F9 699 aa28.38■■■□□ 2.13
LSM7-201ENST00000252622 LRCH3Q96II8 777 aa28.38■■■□□ 2.13
LSM7-201ENST00000252622 C8orf76Q96K31 380 aa28.38■■■□□ 2.13
LSM7-201ENST00000252622 TEKT3Q9BXF9 490 aa28.38■■■□□ 2.13
LSM7-201ENST00000252622 PCDHA10Q9Y5I2 948 aa28.38■■■□□ 2.13
LSM7-201ENST00000252622 TRIP12Q14669 1992 aaPredicted RBP28.37■■■□□ 2.13
LSM7-201ENST00000252622 WDR64B1ANS9 1081 aa28.37■■■□□ 2.13
LSM7-201ENST00000252622 BTBD18B2RXH4 712 aa28.37■■■□□ 2.13
LSM7-201ENST00000252622 GAS7O60861 476 aa28.37■■■□□ 2.13
LSM7-201ENST00000252622 GPR153Q6NV75 609 aa28.37■■■□□ 2.13
LSM7-201ENST00000252622 TRAF7Q6Q0C0 670 aa28.37■■■□□ 2.13
LSM7-201ENST00000252622 MTIF3Q9H2K0 278 aaKnown RBP28.37■■■□□ 2.13
LSM7-201ENST00000252622 ZNF302Q9NR11 478 aa28.37■■■□□ 2.13
LSM7-201ENST00000252622 MBLAC1A4D2B0 266 aaPredicted RBP28.36■■■□□ 2.13
LSM7-201ENST00000252622 FAM205CA6NFA0 338 aa28.36■■■□□ 2.13
LSM7-201ENST00000252622 SLC37A4O43826 429 aa28.36■■■□□ 2.13
LSM7-201ENST00000252622 PSMD10O75832 226 aa28.36■■■□□ 2.13
LSM7-201ENST00000252622 PSAPP07602 524 aa28.36■■■□□ 2.13
LSM7-201ENST00000252622 SAFBQ15424 915 aaKnown RBP eCLIP28.36■■■□□ 2.13
LSM7-201ENST00000252622 FAM184AQ8NB25 1140 aa28.36■■■□□ 2.13
LSM7-201ENST00000252622 TMX3Q96JJ7 454 aa28.36■■■□□ 2.13
LSM7-201ENST00000252622 TRPC6Q9Y210 931 aa28.36■■■□□ 2.13
LSM7-201ENST00000252622 RRN3P2A6NIE6 340 aa28.35■■■□□ 2.13
LSM7-201ENST00000252622 INSRRP14616 1297 aa28.35■■■□□ 2.13
LSM7-201ENST00000252622 SFNP31947 248 aa28.35■■■□□ 2.13
LSM7-201ENST00000252622 THPOP40225 353 aa28.35■■■□□ 2.13
LSM7-201ENST00000252622 ZNF618Q5T7W0 954 aa28.35■■■□□ 2.13
LSM7-201ENST00000252622 SWSAP1Q6NVH7 229 aa28.35■■■□□ 2.13
LSM7-201ENST00000252622 TAF2Q6P1X5 1199 aa28.35■■■□□ 2.13
LSM7-201ENST00000252622 DEFB128Q7Z7B8 93 aa28.35■■■□□ 2.13
LSM7-201ENST00000252622 KCNMB3Q9NPA1 279 aa28.35■■■□□ 2.13
LSM7-201ENST00000252622 TUBE1Q9UJT0 475 aa28.35■■■□□ 2.13
LSM7-201ENST00000252622 MAFBQ9Y5Q3 323 aaPredicted RBP28.35■■■□□ 2.13
LSM7-201ENST00000252622 SCN5AQ14524 2016 aa28.35■■■□□ 2.13
LSM7-201ENST00000252622 POTEB3A0JP26 581 aa28.34■■■□□ 2.13
LSM7-201ENST00000252622 CCNT1O60563 726 aaKnown RBP28.34■■■□□ 2.13
LSM7-201ENST00000252622 JAK3P52333 1124 aa28.34■■■□□ 2.13
LSM7-201ENST00000252622 SMAD3P84022 425 aaKnown RBP28.34■■■□□ 2.13
LSM7-201ENST00000252622 PDXDC2PQ6P474 469 aa28.34■■■□□ 2.13
LSM7-201ENST00000252622 POTEBQ6S5H4 581 aa28.34■■■□□ 2.13
LSM7-201ENST00000252622 B3GNT9Q6UX72 402 aa28.34■■■□□ 2.13
LSM7-201ENST00000252622 FBXO18Q8NFZ0 1043 aa28.34■■■□□ 2.13
LSM7-201ENST00000252622 RDM1Q8NG50 284 aa28.34■■■□□ 2.13
LSM7-201ENST00000252622 ATP8B4Q8TF62 1192 aa28.34■■■□□ 2.13
LSM7-201ENST00000252622 UNC45AQ9H3U1 944 aa28.34■■■□□ 2.13
LSM7-201ENST00000252622 DISC1Q9NRI5 854 aa28.34■■■□□ 2.13
LSM7-201ENST00000252622 IGSF9BQ9UPX0 1349 aa28.34■■■□□ 2.13
LSM7-201ENST00000252622 TBX3O15119 743 aa28.33■■■□□ 2.13
LSM7-201ENST00000252622 CXCL10P02778 98 aa28.33■■■□□ 2.13
LSM7-201ENST00000252622 GUCY1B3Q02153 619 aa28.33■■■□□ 2.13
LSM7-201ENST00000252622 GPNMBQ14956 572 aa28.33■■■□□ 2.13
LSM7-201ENST00000252622 MARCH8Q5T0T0 291 aa28.33■■■□□ 2.13
LSM7-201ENST00000252622 RPAINQ86UA6 219 aa28.33■■■□□ 2.13
LSM7-201ENST00000252622 GJA10Q969M2 543 aa28.33■■■□□ 2.13
LSM7-201ENST00000252622 FAM20AQ96MK3 541 aa28.33■■■□□ 2.13
LSM7-201ENST00000252622 SAMM50Q9Y512 469 aa28.33■■■□□ 2.13
LSM7-201ENST00000252622 HBP1O60381 514 aa28.32■■■□□ 2.12
LSM7-201ENST00000252622 ACTN1P12814 892 aa28.32■■■□□ 2.12
LSM7-201ENST00000252622 OTOP2Q7RTS6 562 aa28.32■■■□□ 2.12
LSM7-201ENST00000252622 CXXC1Q9P0U4 656 aaPredicted RBP28.32■■■□□ 2.12
LSM7-201ENST00000252622 KAT6AQ92794 2004 aa28.31■■■□□ 2.12
LSM7-201ENST00000252622 RSPH10B2B2RC85 870 aa28.31■■■□□ 2.12
LSM7-201ENST00000252622 CHMP2AO43633 222 aa28.31■■■□□ 2.12
LSM7-201ENST00000252622 NBNO60934 754 aa28.31■■■□□ 2.12
LSM7-201ENST00000252622 RPLP2P05387 115 aaKnown RBP28.31■■■□□ 2.12
LSM7-201ENST00000252622 RSPH10BP0C881 870 aa28.31■■■□□ 2.12
LSM7-201ENST00000252622 IGBP1P78318 339 aa28.31■■■□□ 2.12
LSM7-201ENST00000252622 FTOQ9C0B1 505 aaKnown RBP eCLIP28.31■■■□□ 2.12
LSM7-201ENST00000252622 FOXP1Q9H334 677 aaPredicted RBP28.31■■■□□ 2.12
LSM7-201ENST00000252622 GABBR1Q9UBS5 961 aa28.31■■■□□ 2.12
LSM7-201ENST00000252622 KIF3AQ9Y496 699 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms