RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 FBXO22Q8NEZ5 403 aa24.06■■□□□ 1.44
NEDD8-201ENST00000250495 C17orf80Q9BSJ5 609 aa24.06■■□□□ 1.44
NEDD8-201ENST00000250495 BARHL2Q9NY43 387 aa24.06■■□□□ 1.44
NEDD8-201ENST00000250495 NFASCO94856 1347 aa24.06■■□□□ 1.44
NEDD8-201ENST00000250495 SIP14410 1827 aa24.05■■□□□ 1.44
NEDD8-201ENST00000250495 STXBP3O00186 592 aa24.05■■□□□ 1.44
NEDD8-201ENST00000250495 CYP2W1Q8TAV3 490 aa24.05■■□□□ 1.44
NEDD8-201ENST00000250495 ANO3Q9BYT9 981 aa24.05■■□□□ 1.44
NEDD8-201ENST00000250495 NAP1L2Q9ULW6 460 aaPredicted RBP24.05■■□□□ 1.44
NEDD8-201ENST00000250495 CCDC196A0A1B0GTZ2 297 aa24.04■■□□□ 1.44
NEDD8-201ENST00000250495 AP3B2Q13367 1082 aa24.04■■□□□ 1.44
NEDD8-201ENST00000250495 MARCH8Q5T0T0 291 aa24.04■■□□□ 1.44
NEDD8-201ENST00000250495 DNAJB3Q8WWF6 145 aa24.04■■□□□ 1.44
NEDD8-201ENST00000250495 PGBD1Q96JS3 809 aa24.04■■□□□ 1.44
NEDD8-201ENST00000250495 FAM217BQ9NTX9 383 aaPredicted RBP24.04■■□□□ 1.44
NEDD8-201ENST00000250495 COL4A4P53420 1690 aaPredicted RBP24.04■■□□□ 1.44
NEDD8-201ENST00000250495 ARP10275 920 aa24.03■■□□□ 1.44
NEDD8-201ENST00000250495 GHRP10912 638 aa24.03■■□□□ 1.44
NEDD8-201ENST00000250495 INSRRP14616 1297 aa24.03■■□□□ 1.44
NEDD8-201ENST00000250495 CDC27P30260 824 aa24.03■■□□□ 1.44
NEDD8-201ENST00000250495 ZNF76P36508 570 aa24.03■■□□□ 1.44
NEDD8-201ENST00000250495 IGBP1P78318 339 aa24.03■■□□□ 1.44
NEDD8-201ENST00000250495 MGAT3Q09327 533 aa24.03■■□□□ 1.44
NEDD8-201ENST00000250495 PLPPR4Q7Z2D5 763 aa24.03■■□□□ 1.44
NEDD8-201ENST00000250495 PCYT2Q99447 389 aa24.03■■□□□ 1.44
NEDD8-201ENST00000250495 MEIS1O00470 390 aa24.02■■□□□ 1.44
NEDD8-201ENST00000250495 SREBF1P36956 1147 aa24.02■■□□□ 1.44
NEDD8-201ENST00000250495 CLK2P49760 499 aaKnown RBP24.02■■□□□ 1.44
NEDD8-201ENST00000250495 STAT5BP51692 787 aa24.02■■□□□ 1.44
NEDD8-201ENST00000250495 ACTR2P61160 394 aa24.02■■□□□ 1.44
NEDD8-201ENST00000250495 PTPROQ16827 1216 aa24.02■■□□□ 1.44
NEDD8-201ENST00000250495 EPC2Q52LR7 807 aa24.02■■□□□ 1.44
NEDD8-201ENST00000250495 IER5Q5VY09 327 aa24.02■■□□□ 1.44
NEDD8-201ENST00000250495 KCNB2Q92953 911 aa24.02■■□□□ 1.44
NEDD8-201ENST00000250495 AGO4Q9HCK5 861 aaKnown RBP24.02■■□□□ 1.44
NEDD8-201ENST00000250495 TRPC6Q9Y210 931 aa24.02■■□□□ 1.44
NEDD8-201ENST00000250495 ADD1P35611 737 aaKnown RBP24.01■■□□□ 1.43
NEDD8-201ENST00000250495 METAP2P50579 478 aaKnown RBP eCLIP24.01■■□□□ 1.43
NEDD8-201ENST00000250495 LPIN1Q14693 890 aa24.01■■□□□ 1.43
NEDD8-201ENST00000250495 IL17RAQ96F46 866 aa24.01■■□□□ 1.43
NEDD8-201ENST00000250495 NECAB3Q96P71 396 aaPredicted RBP24.01■■□□□ 1.43
NEDD8-201ENST00000250495 TMEM260Q9NX78 707 aa24.01■■□□□ 1.43
NEDD8-201ENST00000250495 CDY2AQ9Y6F7 541 aa24.01■■□□□ 1.43
NEDD8-201ENST00000250495 ENPP3O14638 875 aa24■■□□□ 1.43
NEDD8-201ENST00000250495 ATG7O95352 703 aa24■■□□□ 1.43
NEDD8-201ENST00000250495 SLC26A2P50443 739 aa24■■□□□ 1.43
NEDD8-201ENST00000250495 MRPS6P82932 125 aaKnown RBP24■■□□□ 1.43
NEDD8-201ENST00000250495 PLCB4Q15147 1175 aa24■■□□□ 1.43
NEDD8-201ENST00000250495 PFKFB3Q16875 520 aaPredicted RBP24■■□□□ 1.43
NEDD8-201ENST00000250495 FBXO47Q5MNV8 452 aa24■■□□□ 1.43
NEDD8-201ENST00000250495 MCTP2Q6DN12 878 aa24■■□□□ 1.43
NEDD8-201ENST00000250495 TSHZ1Q6ZSZ6 1077 aa24■■□□□ 1.43
NEDD8-201ENST00000250495 Q6ZUG5 572 aa24■■□□□ 1.43
NEDD8-201ENST00000250495 NIPA1Q7RTP0 329 aa24■■□□□ 1.43
NEDD8-201ENST00000250495 TMEM192Q8IY95 271 aa24■■□□□ 1.43
NEDD8-201ENST00000250495 MRPL38Q96DV4 380 aaKnown RBP24■■□□□ 1.43
NEDD8-201ENST00000250495 PCDHA2Q9Y5H9 948 aa24■■□□□ 1.43
NEDD8-201ENST00000250495 SQORQ9Y6N5 450 aa24■■□□□ 1.43
NEDD8-201ENST00000250495 REV3LO60673 3130 aa23.99■■□□□ 1.43
NEDD8-201ENST00000250495 H3BNC9 293 aa23.99■■□□□ 1.43
NEDD8-201ENST00000250495 SCG2P13521 617 aa23.99■■□□□ 1.43
NEDD8-201ENST00000250495 APOBRQ0VD83 1088 aa23.99■■□□□ 1.43
NEDD8-201ENST00000250495 ITGB3BPQ13352 177 aaPredicted RBP23.99■■□□□ 1.43
NEDD8-201ENST00000250495 GPM6BQ13491 265 aa23.99■■□□□ 1.43
NEDD8-201ENST00000250495 JAKMIP3Q5VZ66 844 aa23.99■■□□□ 1.43
NEDD8-201ENST00000250495 BLOC1S2Q6QNY1 142 aa23.99■■□□□ 1.43
NEDD8-201ENST00000250495 FIBCD1Q8N539 461 aa23.99■■□□□ 1.43
NEDD8-201ENST00000250495 CCDC12Q8WUD4 166 aaPredicted RBP23.99■■□□□ 1.43
NEDD8-201ENST00000250495 JAKMIP1Q96N16 626 aaKnown RBP23.99■■□□□ 1.43
NEDD8-201ENST00000250495 FAM49AQ9H0Q0 323 aaPredicted RBP23.99■■□□□ 1.43
NEDD8-201ENST00000250495 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.98■■□□□ 1.43
NEDD8-201ENST00000250495 M0QZ92 97 aa23.98■■□□□ 1.43
NEDD8-201ENST00000250495 CPA1P15085 419 aa23.98■■□□□ 1.43
NEDD8-201ENST00000250495 HSPA4P34932 840 aa23.98■■□□□ 1.43
NEDD8-201ENST00000250495 BRF1Q92994 677 aa23.98■■□□□ 1.43
NEDD8-201ENST00000250495 C6orf50Q9HD87 102 aa23.98■■□□□ 1.43
NEDD8-201ENST00000250495 BRWD1Q9NSI6 2320 aa23.98■■□□□ 1.43
NEDD8-201ENST00000250495 ESYT2A0FGR8 921 aa23.97■■□□□ 1.43
NEDD8-201ENST00000250495 POTEB3A0JP26 581 aa23.97■■□□□ 1.43
NEDD8-201ENST00000250495 PRPF3O43395 683 aaKnown RBP23.97■■□□□ 1.43
NEDD8-201ENST00000250495 CYP3A4P08684 503 aa23.97■■□□□ 1.43
NEDD8-201ENST00000250495 MUC3AQ02505 3323 aa23.97■■□□□ 1.43
NEDD8-201ENST00000250495 COL4A6Q14031 1691 aa23.97■■□□□ 1.43
NEDD8-201ENST00000250495 FAM160B1Q5W0V3 765 aa23.97■■□□□ 1.43
NEDD8-201ENST00000250495 POTEBQ6S5H4 581 aa23.97■■□□□ 1.43
NEDD8-201ENST00000250495 PLA2G4DQ86XP0 818 aa23.97■■□□□ 1.43
NEDD8-201ENST00000250495 NME8Q8N427 588 aa23.97■■□□□ 1.43
NEDD8-201ENST00000250495 FBXL16Q8N461 479 aa23.97■■□□□ 1.43
NEDD8-201ENST00000250495 FTHL17Q9BXU8 183 aa23.97■■□□□ 1.43
NEDD8-201ENST00000250495 ZMYND12Q9H0C1 365 aa23.97■■□□□ 1.43
NEDD8-201ENST00000250495 UBE2ZQ9H832 354 aaPredicted RBP23.97■■□□□ 1.43
NEDD8-201ENST00000250495 RWDD3Q9Y3V2 267 aa23.97■■□□□ 1.43
NEDD8-201ENST00000250495 SNX14Q9Y5W7 946 aa23.97■■□□□ 1.43
NEDD8-201ENST00000250495 IGKV6D-21A0A0A0MT36 114 aa23.96■■□□□ 1.43
NEDD8-201ENST00000250495 SMIM35A0A1B0GVV1 85 aa23.96■■□□□ 1.43
NEDD8-201ENST00000250495 RB1P06400 928 aa23.96■■□□□ 1.43
NEDD8-201ENST00000250495 PSMA5P28066 241 aa23.96■■□□□ 1.43
NEDD8-201ENST00000250495 GNA11P29992 359 aa23.96■■□□□ 1.43
NEDD8-201ENST00000250495 AKAP17AQ02040 695 aaKnown RBP23.96■■□□□ 1.43
NEDD8-201ENST00000250495 TIGD5Q53EQ6 642 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms